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Pacific Ethanol, Inc.

peix · NASDAQ Basic Materials
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Employees 201-500
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FY2007 Annual Report · Pacific Ethanol, Inc.
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UNITED STATES  
SECURITIES AND EXCHANGE COMMISSION  
Washington, D.C. 20549  

FORM 10-K  

(Mark One) 
 

ANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 
1934 For the fiscal year ended December 31, 2007 
OR 
TRANSITION  REPORT  PURSUANT  TO  SECTION  13  OR  15(d)  OF  THE  SECURITIES  EXCHANGE 
ACT OF 1934 For the transition period from                  to                

(cid:2)(cid:2)(cid:2)(cid:2) 

Commission file number: 000-21467 
PACIFIC ETHANOL, INC. 
(Exact name of registrant as specified in its charter)  

Delaware 
(State or other jurisdiction of incorporation or organization) 

41-2170618 
(I.R.S. Employer Identification No.) 

400 Capitol Mall, Suite 2060, Sacramento, California 
(Address of principal executive offices) 

95814 
(Zip Code) 
Registrant’s telephone number, including area code: (916) 403-2123 

Securities registered pursuant to Section 12(b) of the Act: Common Stock, $0.001 par value   
Securities registered pursuant to Section 12(g) of the Act: None 
(Title of class)  

Indicate by check mark whether the registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities 

Act. Yes  (cid:2)    No   

Indicate by check mark if the registrant is not required to file reports pursuant to Section 13 or Section 15(d) of the Act. 

Yes  (cid:2)    No   

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the 
Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required 
to file such reports), and (2) has been subject to such filing requirements for the past 90 days.  Yes      No  (cid:2) 

Indicate by check  mark if disclosure of delinquent filers in response to Item 405 of Regulation S-K is not contained 
herein,  and  will  not  be  contained,  to  the  best  of  registrant’s  knowledge,  in  definitive  proxy  or  information  statements 
incorporated by reference in Part III of this Form 10-K or any amendment to this Form 10-K.  

Indicate by check mark whether the registrant is a large accelerated filer, an accelerated filer, or a non-accelerated filer, 
or  a  smaller  reporting  company.  See  the  definitions  of  “large  accelerated  filer,”  “accelerated  filer”  and  “smaller  reporting 
company” in Rule 12b-2 of the Exchange Act. (Check one): 

Large accelerated filer  (cid:2) 
Non-accelerated filer  (cid:2) (Do not check if a smaller reporting company) 

Accelerated filer   
Smaller reporting company  (cid:2) 

Indicate  by  check  mark  whether  the  registrant  is  a  shell  company  (as  defined  in  Rule  12b-2  of  the  Act). 

Yes  (cid:2)    No   

The aggregate market value of the voting common equity held by nonaffiliates of the registrant computed by reference 
to the closing sale price of such stock, was approximately $475.0 million as of June 29, 2007, the last business day of the 
registrant’s most recently completed second fiscal quarter. The registrant has no non-voting common equity. 

The  number  of  shares  of  the  registrant’s  common  stock,  $0.001  par  value,  outstanding  as  of  March  24,  2008  was 

40,674,464. 

DOCUMENTS INCORPORATED BY REFERENCE:   

Part III incorporates by reference certain information from the registrant’s proxy statement (the “Proxy Statement”) for 

the 2008 Annual Meeting of Stockholders to be filed on or before April 30, 2008.  

 
 
  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
TABLE OF CONTENTS 

PART I 

Page 

Item 1. 

Business ..................................................................................................................................................... 1 

Item 1A.  Risk Factors. ............................................................................................................................................ 13 

Item 1B.  Unresolved Staff Comments. ................................................................................................................... 23 

Item 2. 

Properties. ................................................................................................................................................ 24 

Item 3. 

Legal Proceedings. ................................................................................................................................... 24 

Item 4. 

Item 5. 

Submission of Matters to a Vote of Security Holders. ............................................................................. 26 

Market For Registrant’s Common Equity, Related Stockholder Matters and Issuer Purchases of 
Equity Securities. ..................................................................................................................................... 26 

PART II 

Item 6. 

Selected Financial Data. ........................................................................................................................... 29 

Item 7. 

Management’s Discussion and Analysis of Financial Condition and Results of Operations. .................. 30 

Item 7A.  Quantitative and Qualitative Disclosures About Market Risk. ................................................................ 34 

Item 8. 

Financial Statements and Supplementary Data. ....................................................................................... 51 

Item 9. 

Changes in and Disagreements with Accountants on Accounting and Financial Disclosure. ................. 51 

Item 9A.  Controls and Procedures .......................................................................................................................... 51 

Item 9A(T)  Controls and Procedures .......................................................................................................................... 57 

Item 9B.  Other Information. ................................................................................................................................... 38 

PART III 

Item 10.  Directors, Executive Officers and Corporate Governance ....................................................................... 57 

Item 11. 

Executive Compensation ......................................................................................................................... 57 

Item 12. 

Security Ownership of Certain Beneficial Owners and Management and Related Stockholder 
Matters ..................................................................................................................................................... 57 

Item 13. 

Certain Relationships and Related Transactions, and Director Independence ......................................... 57 

Item 14. 

Principal Accounting Fees and Services .................................................................................................. 57 

Item 15. 

Exhibits, Financial Statement Schedules ................................................................................................. 57 

Index to Financial Statements .................................................................................................................................... F-1 

PART IV 

Index to Exhibits 
Signatures 
Exhibits Filed With This Report 

 
 
 
CAUTIONARY STATEMENT 

All statements included or incorporated by reference in this Annual Report on Form 10-K, other than 
statements or characterizations of historical fact, are forward-looking statements. Examples of forward-
looking statements include, but are not limited to, statements concerning projected net sales, costs and 
expenses and gross margins; our accounting estimates, assumptions and judgments; our success in 
pending litigation; the demand for ethanol and its co-products; the competitive nature of and anticipated 
growth in our industry; production capacity and goals; our ability to consummate acquisitions and 
integrate their operations successfully; and our prospective needs for additional capital. These forward-
looking statements are based on our current expectations, estimates, approximations and projections 
about our industry and business, management’s beliefs, and certain assumptions made by us, all of which 
are subject to change. Forward-looking statements can often be identified by words such as 
“anticipates,” “expects,” “intends,” “plans,” “predicts,” “believes,” “seeks,” “estimates,” “may,” 
“will,” “should,” “would,” “could,” “potential,” “continue,” “ongoing,” similar expressions and 
variations or negatives of these words. These statements are not guarantees of future performance and 
are subject to risks, uncertainties and assumptions that are difficult to predict. Therefore, our actual 
results could differ materially and adversely from those expressed in any forward-looking statements as a 
result of various factors, some of which are listed under “Risk Factors” in Item 1A of this Report. These 
forward-looking statements speak only as of the date of this Report. We undertake no obligation to revise 
or update publicly any forward-looking statement for any reason, except as otherwise required by law.  

PART I 

Item 1.  Business. 

Overview 

Our primary goal is to be the leading marketer and producer of low carbon renewable fuels in the 

Western United States.  

We produce and sell ethanol and its co-products and provide transportation, storage and delivery 

of ethanol through third-party service providers in the Western United States, primarily in California, 
Nevada, Arizona, Oregon, Colorado and Idaho. We have extensive customer relationships throughout the 
Western United States and extensive supplier relationships throughout the Western and Midwestern 
United States. 

Our customers are integrated oil companies and gasoline marketers who blend ethanol into 

gasoline. We supply ethanol to our customers either from our own ethanol production facilities located 
within the regions we serve, or with ethanol procured in bulk from other producers. In some cases, we 
have marketing agreements with ethanol producers to market all of the output of their facilities. 
Additionally, we have customers who purchase our co-products for animal feed and other uses. 

We own and operate two ethanol production facilities located in Madera, California and 
Boardman, Oregon. Our Madera facility has an annual production capacity of up to 40 million gallons and 
has been in operation since October 2006. Our Boardman facility has an annual production capacity of up 
to 40 million gallons and has been in operation since September 2007. In addition, we own a 42% interest 
in Front Range Energy, LLC, or Front Range, which owns and operates an ethanol production facility 
with annual production capacity of up to 50 million gallons in Windsor, Colorado. We have two 
additional ethanol production facilities under construction, in Burley, Idaho and Stockton, California, 
which are expected to commence operations in the second and third quarters of 2008, respectively. We 
also intend to either construct or acquire additional ethanol production facilities as financial resources and 

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business prospects make the construction or acquisition of these facilities advisable. See “—Production 
Facilities.” 

Total annual gasoline consumption in the United States is approximately 140 billion gallons. 

Total annual ethanol consumption represented less than 5% of this amount in 2007. We believe that the 
domestic ethanol industry has substantial potential for growth to initially reach what we estimate is an 
achievable level of at least 10% of the total annual gasoline consumption in the United States, or 
approximately 14 billion gallons of ethanol annually and thereafter up to 36 billion gallons of ethanol 
annually under the new national Renewable Fuel Standards, or RFS, by 2022. See “—Governmental 
Regulation.”  

We intend to reach our goal to be the leading marketer and producer of low carbon renewable 

fuels in the Western United States in part by expanding our relationships with customers and third-party 
ethanol producers to market higher volumes of ethanol, by expanding our relationships with animal feed 
distributors and end users to build local markets for wet distillers grains, or WDG, the primary co-product 
of our ethanol production, and by expanding the market for ethanol by continuing to work with state 
governments to encourage the adoption of policies and standards that promote ethanol as a fuel additive 
and transportation fuel. In addition, we intend to expand our annual production capacity to 220 million 
gallons in 2008, upon completion of our facilities in Burley, Idaho and Stockton, California, and to 420 
million gallons of annual production capacity in 2010, through new construction or acquisition of 
additional ethanol production facilities. We also intend to expand our distribution infrastructure by 
increasing our ability to provide transportation, storage and related logistical services to our customers 
throughout the Western United States.  

Company History 

We are a Delaware corporation formed in February 2005. In March 2005, we completed a share 

exchange transaction, or Share Exchange Transaction, with the shareholders of Pacific Ethanol, Inc., a 
California corporation, or PEI California, and the holders of the membership interests of each of Kinergy, 
LLC, or Kinergy, and ReEnergy, LLC, or ReEnergy. Upon completion of the Share Exchange 
Transaction, we acquired all of the issued and outstanding shares of capital stock of PEI California and all 
of the outstanding membership interests of each of Kinergy and ReEnergy. Immediately prior to the 
consummation of the Share Exchange Transaction, our predecessor, Accessity Corp., a New York 
corporation, or Accessity, reincorporated in the State of Delaware under the name Pacific Ethanol, Inc.  

Our main Internet address is http://www.pacificethanol.net. Our annual reports on Form 10-K, 

quarterly reports on Form 10-Q, current reports on Form 8-K, amendments to those reports and other 
Securities and Exchange Commission, or SEC, filings are available free of charge through our website as 
soon as reasonably practicable after these reports are electronically filed with, or furnished to, the SEC. 
Our common stock trades on the Nasdaq Global Market under the symbol PEIX. The inclusion of our 
website address in this Report does not include or incorporate by reference into this Report any 
information contained on our website.  

Competitive Strengths 

We believe that our competitive strengths include the following: 

•  Our customer and supplier relationships. We have developed extensive business 
relationships with our customers and suppliers. In particular, we have developed extensive business 
relationships with major and independent un-branded gasoline suppliers who collectively control the 
majority of all gasoline sales in California and other Western states. In addition, we have developed 

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extensive business relationships with ethanol and grain suppliers throughout the Western and 
Midwestern United States. 

•  Our ethanol distribution network. We believe that we have a competitive advantage due 
to our experience in marketing to the segment of customers in major metropolitan and rural markets 
in the Western United States. We have developed an ethanol distribution network for delivery of 
ethanol by truck to virtually every significant fuel terminal as well as to numerous smaller fuel 
terminals throughout California and other Western states. Fuel terminals have limited storage 
capacity and we have been successful in securing storage tanks at many of the terminals we service. 
In addition, we have an extensive network of third-party delivery trucks available to deliver ethanol 
throughout the Western United States.  

•  Our strategic locations. We believe that our focus on developing and acquiring ethanol 

production facilities in markets where local characteristics create the opportunity to capture a 
significant production and shipping cost advantage over competing ethanol production facilities 
provides us with competitive advantages, including transportation cost, delivery timing and logistical 
advantages as well as higher margins associated with the local sale of WDG and other co-products.  

•  Our modern technologies. Our existing production facilities use the latest production 
technologies to take advantage of state-of-the-art technical and operational efficiencies in order to 
achieve lower operating costs and more efficient production of ethanol and its co-products and 
reduce our use of carbon-based fuels. We expect to implement these technologies in new production 
facilities currently under development and other planned production facilities.  

•  Our experienced management. Neil M. Koehler, our President and Chief Executive 
Officer, has over 20 years of experience in the ethanol production, sales and marketing industry. 
Mr. Koehler is the Director of the California Renewable Fuels Partnership, a Director of the 
Renewable Fuels Association, or RFA, and is a frequent speaker on the issue of renewable fuels and 
ethanol marketing and production. In addition to Mr. Koehler, we have seasoned managers with 
many years of experience in the ethanol, fuel, energy, construction and feed industries, leading our 
various departments. We believe that the experience of our management over the past two decades 
and our ethanol marketing operations have enabled us to establish valuable relationships in the 
ethanol industry and understand the business of marketing and producing ethanol.  

We believe that these advantages will allow us to capture an increasing share of the total market 
for ethanol and its co-products and earn favorable margins on ethanol and its co-products that we market 
as well as ethanol that we produce.  

Business and Growth Strategy 

Our primary goal is to be the leading marketer and producer of low carbon renewable fuels in the 

Western United States. Key elements of our business and growth strategy to achieve this objective 
include: 

•  Expand ethanol marketing revenues, ethanol markets and distribution infrastructure. We 

plan to increase our ethanol marketing revenues by expanding our relationships with third-party 
ethanol producers to market higher volumes of ethanol throughout the Western United States. In 
addition, we plan to expand relationships with animal feed distributors and dairy operators to build 
local markets for WDG. We also plan to expand the market for ethanol by continuing to work with 
state governments to encourage the adoption of policies and standards that promote ethanol as a fuel 
additive and ultimately as a primary transportation fuel. In addition, we plan to expand our 

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distribution infrastructure by increasing our ability to provide transportation, storage and related 
logistical services to our customers throughout the Western United States. 

•  Add production capacity to meet expected future demand for ethanol. We are developing 
additional ethanol production facilities to meet the expected future demand for ethanol. We are also 
exploring opportunities to add production capacity through strategic acquisitions of existing or 
pending ethanol production facilities that meet our cost and location criteria. We intend to expand our 
annual production capacity to 220 million gallons in 2008, upon completion of our facilities under 
construction in Burley and Stockton and to 420 million gallons of annual production capacity in 2010 
through new construction or acquisition of additional ethanol production facilities.  

•  Focus on cost efficiencies. We plan to develop or acquire ethanol production facilities in 

markets where local characteristics create the opportunity to capture a significant production and 
shipping cost advantage over competing ethanol production facilities. We believe a combination of 
factors will enable us to achieve this cost advantage, including: 

o  Locations near fuel blending facilities will enable lower ethanol transportation costs 
and enjoy timing and logistical advantages over competing locations which require 
ethanol to be shipped over much longer distances.  

o  Locations adjacent to major rail lines will enable the efficient delivery of corn in 

large unit trains from major corn-producing regions.  

o  Locations near large concentrations of dairy and/or beef cattle will enable delivery of 

WDG over short distances without the need for costly drying processes.  

In addition to these location-related efficiencies, we plan to incorporate advanced design 

elements into our new production facilities to take advantage of state-of-the-art technical and 
operational efficiencies.  

•  Explore new technologies and renewable fuels. We are evaluating a number of 
technologies that may increase the efficiency of our ethanol production facilities and reduce our use 
of carbon-based fuels. In addition, we are exploring the feasibility of using different and potentially 
abundant and cost-effective feedstocks, such as cellulosic plant biomass, to supplement corn as the 
basic raw material used in the production of ethanol. On January 29, 2008, the Department of Energy 
included us in a matching award of $24.3 million to build the first cellulosic ethanol demonstration 
plant in the Northwest United States. 

•  Employ risk mitigation strategies. We seek to mitigate our exposure to commodity price 
fluctuations by purchasing forward a portion of our corn and natural gas requirements through fixed-
price contracts with our suppliers, as well as, entering into derivative instruments to fix or establish a 
range of corn and natural gas prices. To mitigate ethanol inventory price risks, we may sell a portion 
of our production forward under fixed- or index-price contracts, or both. We may hedge a portion of 
the price risks associated with index-price contracts by selling exchange-traded unleaded gasoline 
futures contracts. Proper execution of these risk mitigation strategies can reduce the volatility of our 
gross profit margins.  

•  Evaluate and pursue acquisition opportunities. We intend to evaluate and pursue 
opportunities to acquire additional ethanol production, storage and distribution facilities and related 
infrastructure as financial resources and business prospects make the acquisition of these facilities 
advisable. In addition, we may also seek to acquire facility sites under development.  

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Industry Overview and Market Opportunity 

Overview of Ethanol Market  

The primary applications for fuel-grade ethanol in the United States include: 

•  Octane enhancer. On average, regular unleaded gasoline has an octane rating of 87 and 
premium unleaded has an octane rating of 91. In contrast, pure ethanol has an average octane rating of 
113. Adding ethanol to gasoline enables refiners to produce greater quantities of lower octane blend stock 
with an octane rating of less than 87 before blending. In addition, ethanol is commonly added to finished 
regular grade gasoline as a means of producing higher octane mid-grade and premium gasoline.  

•  Renewable fuels. Ethanol is blended with gasoline in order to enable gasoline refiners to 

comply with a variety of governmental programs, in particular, the national RFS designed to promote 
alternatives to fossil fuels. See “—Governmental Regulation.” 

•  Fuel blending. In addition to its performance and environmental benefits, ethanol is used 
to extend fuel supplies. As the need for automotive fuel in the United States increases and the dependence 
on foreign crude oil and refined products grows, the United States is increasingly seeking domestic 
sources of fuel. Much of the ethanol blending throughout the United States is done for the purpose of 
extending the volume of fuel sold at the gasoline pump. Furthermore, conditions in Brazil, where ethanol 
accounts for 40% of all vehicle fuels and is sold in blends with gasoline ranging from 25% to 100%, 
suggest that ethanol could capture a much greater portion of the United States market in the future.  

The ethanol fuel industry is greatly dependent upon tax policies and environmental regulations 

that favor the use of ethanol in motor fuel blends in the United States. See “—Governmental Regulation.” 
Ethanol blends have been either wholly or partially exempt from the federal excise tax on gasoline since 
1978. The current federal excise tax on gasoline is $0.184 per gallon and is paid at the terminal by 
refiners and marketers. If the fuel is blended with ethanol, the blender may claim a $0.51 per gallon tax 
credit for each gallon of ethanol used in the mixture. Federal law also requires the sale of oxygenated 
fuels in certain carbon monoxide non-attainment Metropolitan Statistical Areas, or MSAs, during at least 
four winter months, typically November through February.  

In addition, the Energy Independence and Security Act of 2007, which was signed into law in 

December 2007, significantly increased the prior national RFS. The prior national RFS mandated the use 
of 5.4 billion gallons of renewable fuels in 2008, which was to rise incrementally and peak at 7.5 billion 
gallons by 2012. The new national RFS significantly increases the mandated use of renewable fuels to 9.0 
billion gallons in 2008, which is to rise incrementally and peak at 36.0 billion gallons by 2022. The new 
national RFS mandates for renewable fuel use increase each year, with corn-based or “conventional” 
ethanol reaching a peak of 15.0 billion gallons by 2015. Beginning in 2016, increases in the new national 
RFS targets must be met with advanced biofuels, defined as cellulosic ethanol and other biofuels derived 
from feedstock other than corn starch. We believe that these increases will bolster demand for ethanol.  

In January 2007, California’s Governor signed an executive order directing the California Air 
Resource Board to implement a Low Carbon Fuels Standard for transportation fuels. The Governor’s 
office estimates that the standard will have the effect of increasing current renewable fuels use in 
California by three to five times by 2020. The State of Oregon implemented a state-wide renewable fuels 
standard effective January 2008. This standard requires a 10% ethanol blend in every gallon of gasoline 
and is expected to cause the use of approximately 160 million gallons of ethanol per year in Oregon.  

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We believe that the domestic ethanol industry produced approximately 6.5 billion gallons of 

ethanol in 2007, an increase of approximately 33% from the approximately 4.9 billion gallons of ethanol 
produced in 2006. We believe that the ethanol market in California alone consumed approximately 1.0 
billion gallons in 2007, representing approximately 15% of the national market. However, the Western 
United States has relatively few ethanol plants and local ethanol production levels are substantially below 
the local demand for ethanol. The balance of ethanol is shipped via rail from the Midwest to the Western 
United States. Gasoline and diesel fuel that supply the major fuel terminals are shipped in pipelines 
throughout portions of the Western United States. Unlike gasoline and diesel fuel, however, ethanol 
cannot be shipped in these pipelines because ethanol has an affinity for mixing with water already present 
in the pipelines. When mixed, water dilutes ethanol and creates significant quality control issues. 
Therefore, ethanol must be trucked from rail terminals to regional fuel terminals, or blending racks.  

We believe that approximately 95% of the ethanol produced in the United States is made in the 

Midwest from corn. According to the United States Department of Energy, ethanol is typically blended at 
5.7% to 10% by volume, but is also blended at up to 85% by volume for vehicles designed to operate on 
85% ethanol. Compared to gasoline, ethanol is generally considered to be less expensive and cleaner 
burning and contains higher octane. We anticipate that the increasing demand for transportation fuels 
coupled with limited opportunities for gasoline refinery expansions and the growing importance of 
reducing CO2 emissions through the use of renewable fuels will generate additional growth in the demand 
for ethanol in the Western United States.  

Ethanol prices, net of tax incentives offered by the federal government, are generally positively 

correlated to fluctuations in gasoline prices. In addition, we believe that ethanol prices in the Western 
United States are typically $0.15 to $0.20 per gallon higher than in the Midwest due to the freight costs of 
delivering ethanol from Midwest production facilities. 

Total annual gasoline consumption in the United States is approximately 140 billion gallons and 

total annual ethanol consumption represented less than 5% of this amount in 2007. We believe that the 
domestic ethanol industry has substantial potential for growth to initially reach what we estimate is an 
achievable level of at least 10% of the total annual gasoline consumption in the United States, or 
approximately 14 billion gallons of ethanol annually and thereafter up to 36 billion gallons of ethanol 
annually required under the new national RFS by 2022.  

While we believe that the overall national market for ethanol will grow, we believe that the 

market for ethanol in certain geographic areas such as California could experience either increases or 
decreases in demand depending on the preferences of petroleum refiners and state policies. See “Risk 
Factors.” 

Overview of Ethanol Production Process 

The production of ethanol from starch- or sugar-based feedstocks has been refined considerably 

in recent years, leading to a highly-efficient process that we believe now yields substantially more energy 
in the ethanol and co-products than is required to make the products. The modern production of ethanol 
requires large amounts of corn, or other high-starch grains, and water as well as chemicals, enzymes and 
yeast, and denaturants such as unleaded gasoline or liquid natural gas, in addition to natural gas and 
electricity. 

In the dry milling process, corn or other high-starch grains are first ground into meal and then 
slurried with water to form a mash. Enzymes are then added to the mash to convert the starch into the 
simple sugar, dextrose. Ammonia is also added for acidic (pH) control and as a nutrient for the yeast. The 
mash is processed through a high temperature cooking procedure, which reduces bacteria levels prior to 

-6- 

 
fermentation. The mash is then cooled and transferred to fermenters, where yeast is added and the 
conversion of sugar to ethanol and CO2 begins. 

After fermentation, the resulting “beer” is transferred to distillation, where the ethanol is 

separated from the residual “stillage.” The ethanol is concentrated to 190 proof using conventional 
distillation methods and then is dehydrated to approximately 200 proof, representing 100% alcohol levels, 
in a molecular sieve system. The resulting anhydrous ethanol is then blended with about 5% denaturant, 
which is usually gasoline, and is then ready for shipment to market. 

The residual stillage is separated into a coarse grain portion and a liquid portion through a 

centrifugation process. The soluble liquid portion is concentrated to about 40% dissolved solids by an 
evaporation process. This intermediate state is called condensed distillers solubles, or syrup. The coarse 
grain and syrup portions are then mixed to produce WDG or can be mixed and dried to produce dried 
distillers grains with solubles, or DDGS. Both WDG and DDGS are high-protein animal feed products.  

Overview of Distillers Grains Market 

According to the National Corn Growers Association, approximately 8.9 million tons of dried 
distillers grains were produced during the 2005 and 2006 crop year. Dairy cows and beef cattle are the 
primary consumers of distillers grains. According to Rincker and Berger, in their 2003 article entitled 
Optimizing the Use of Distiller Grain for Dairy-Beef Production, a dairy cow can consume 12-15 pounds 
of WDG per day in a balanced diet. At this rate, the WDG output of an ethanol facility that produces 35 
million gallons of ethanol per year can feed approximately 105,000-130,000 dairy cows.  

Successful and profitable delivery of DDGS from the Midwest faces a number of challenges, 
including product inconsistency, handling difficulty and lower feed values. All of these challenges are 
mitigated with a consistent supply of WDG from a local plant. DDGS delivered via rail from the Midwest 
undergoes an intense drying process and exposure to extreme heat at the production facility and in the 
railcars, during which various nutrients are burned off which reduces the nutritional composition of the 
final product. In addition, DDGS shipped via rail can take as long as two weeks to be delivered to the 
Western United States, and scheduling errors or rail yard mishaps can extend delivery time even further. 
DDGS tends to solidify and set in place as it sits in a rail car and thus expedient delivery is important. 
After solidifying and setting in place, DDGS becomes very difficult and thus expensive to unload. During 
the summer, rail cars typically take a full day to unload but can take longer. Also, DDGS shipped from 
the Midwest can be inconsistent because some Midwest producers use a variety of feedstocks depending 
on the availability and price of competing crops. Corn, milo sorghum, barley and wheat are all common 
feedstocks used for the production of ethanol but lead to significant variability in the nutritional 
composition of distillers grains. Dairies depend on rations that are calculated with precision and a subtle 
difference in the makeup of a key ingredient can significantly affect bovine milk production. By not 
drying the distillers grains and by shipping WDG locally, we believe that we will be able to preserve the 
feed integrity of these grains. 

Historically, the market price for distillers grains has been stable in comparison to the market 

price for ethanol. We believe that the market price of DDGS is determined by a number of factors, 
including the market value of corn, soybean meal and other competitive ingredients, the performance or 
value of DDGS in a particular feed formulation and general market forces of supply and demand. We also 
believe that nationwide, the market price of distillers grains historically has been influenced by producers 
of distilled spirits and more recently by the large corn dry-millers that operate fuel ethanol plants. The 
market price of distillers grains is also often influenced by nutritional models that calculate the feed value 
of distillers grains by nutritional content.  

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Customers 

We produce and also purchase from third-parties and resell ethanol to various customers in the 
Western United States. We also arrange for transportation, storage and delivery of ethanol purchased by 
our customers through our agreements with third-party service providers. Our revenue is obtained 
primarily from sales of ethanol to large oil companies. We began producing ethanol in the fourth quarter 
of 2006. 

During 2007, 2006 and 2005, we produced or purchased from third parties and resold an 

aggregate of approximately 191 million, 102 million and 67 million gallons of fuel-grade ethanol to 
approximately 61 customers, 60 customers and 27 customers, respectively. Sales to our two largest 
customers in 2007 represented approximately 32% of our net sales. Sales to our two largest customers in 
2006 represented approximately 25% of our net sales. Sales to our three largest customers in 2005 
represented approximately 39% of our net sales. Customers who accounted for 10% or more of our net 
sales in 2007 were Chevron Products USA and Valero Marketing. Customers who accounted for 10% or 
more of our net sales in 2006 were New West Petroleum and Chevron Products USA. Customers who 
accounted for 10% or more of our net sales in 2005 were New West Petroleum, Chevron Products USA 
and Southern Counties Oil Co. Sales to each of our other customers represented less than 10% of our net 
sales in each of 2007, 2006 and 2005. 

Most of the major metropolitan areas in the Western United States have fuel terminals served by 
rail, but other major metropolitan areas and more remote smaller cities and rural areas do not. We believe 
that we have a competitive advantage due to our experience in marketing to the segment of customers in 
major metropolitan and rural markets in the Western United States. We manage the complicated logistics 
of shipping ethanol purchased from third-parties from the Midwest by rail to intermediate storage 
locations throughout the Western United States and trucking the ethanol from these storage locations to 
blending racks where the ethanol is blended with gasoline. We believe that by establishing an efficient 
service for truck deliveries to these more remote locations, we have differentiated ourselves from our 
competitors, which has resulted in increased sales and higher margins. In addition, by producing ethanol 
in the Western United States, we believe that we will benefit from our ability to increase spot sales of 
ethanol from this additional supply following ethanol price spikes caused from time to time by rail delays 
in delivering ethanol from the Midwest to the Western United States. In addition to producing ethanol, we 
produce ethanol co-products such as WDG. We endeavor to position WDG as the protein feed of choice 
for cattle based on its nutritional composition, consistency of quality and delivery, ease of handling and 
its mixing ability with other feed ingredients. We expect to be one of the few WDG producers with 
production facilities located in the Western United States and we primarily sell our WDG to dairy farmers 
in close proximity to our ethanol production facilities. 

Suppliers 

Our marketing operations are dependent upon various producers of fuel-grade ethanol for our 
ethanol supplies. In addition, we provide ethanol transportation, storage and delivery services through 
third-party service providers with whom we have contracted to receive ethanol at agreed upon locations 
from our suppliers and to store and/or deliver the ethanol to agreed upon locations on behalf of our 
customers. These contracts generally run from year-to-year, subject to termination by either party upon 
advance written notice before the end of the then-current annual term. We also transport ethanol with our 
own fleet of railcars, which we intend to expand to support the continuing growth of our business. 

During 2007, 2006 and 2005, we purchased an aggregate of approximately 99 million, 88 million 

and 67 million gallons of fuel-grade ethanol from approximately 33 suppliers, 22 suppliers and 15 
suppliers, respectively. Purchases from our four largest ethanol suppliers in 2007 represented 

-8- 

 
approximately 68% of our total ethanol purchases. Purchases from our three largest ethanol suppliers in 
2006 represented approximately 50% of our total ethanol purchases. Purchases from our three largest 
ethanol suppliers in 2005 represented approximately 59% of our total ethanol purchases. Purchases from 
each of our other suppliers represented less than 10% of total ethanol purchases in 2007, 2006 and 2005. 

Our ethanol production operations are dependent upon various raw materials suppliers, including 

suppliers of corn, natural gas, electricity and water. The cost of corn is the most important variable cost 
associated with the production of ethanol. An ethanol plant must be able to efficiently ship corn from the 
Midwest via rail and cheaply and reliably truck ethanol to local markets. We believe that our existing and 
planned grain receiving facilities at our current and planned ethanol plants are or will be some of the most 
efficient grain receiving facilities in the United States. We source corn using standard contracts, such as 
spot purchases, forward purchases and basis contracts. We seek to limit our exposure to raw material 
price fluctuations by purchasing forward a portion of our corn requirements on a fixed price basis and by 
purchasing corn and other raw materials futures contracts. In addition, to help protect against supply 
disruptions, we typically maintain inventories of corn at each of our facilities. 

Production Facilities 

The table below provides an overview of our existing ethanol production facilities and our 

facilities under construction. 

Madera 
Facility 
Location ................................................................
Madera, CA 
Quarter/Year completed or 

scheduled to be completed ................................

4th Qtr., 2006 

Annual design basis ethanol 

production capacity (in millions 
of gallons) ................................................................

35 

Approximate maximum annual 

ethanol production capacity (in 
millions of gallons) ................................ 40 

Ownership ................................................................
Primary energy source ................................Natural Gas 
Estimated annual WDG 
production capacity (in 
thousands of tons) ................................

100% 

293 

Front Range 
Facility(1) 
Windsor, CO 

Boardman 
Facility 
Boardman, OR 

Magic 
Valley 
Facility(2) 
Burley, ID 

Stockton 
Facility(2) 
Stockton, CA 

2nd Qtr., 2006 

3rd Qtr., 2007 

2nd Qtr., 2008 

3rd Qtr., 2008 

40 

35 

50 

50 

50 
42% 
Natural Gas 

40 
100% 
Natural Gas 

60 
100% 
Natural Gas 

60 
100% 
Natural Gas 

335 

293 

418 

418 

——————— 
(1)  We own 42% of Front Range, the entity that owns the facility located in Windsor, Colorado. 
(2)  Data is estimated as of completion of construction. 

Site Location Criteria 

Our site location criteria encompass many factors, including proximity of feedstock, fuel blending 

facilities and major rail lines, good road access, water and utility availability and adequate space for 
equipment and truck movement. One of our primary business and growth strategies is to develop or 
acquire ethanol production facilities in markets where local characteristics create the opportunity to 
capture a significant production and shipping cost advantage over competing ethanol production facilities. 
Therefore, it is critical that our production sites are located near fuel blending facilities in the Western 
United States because many of our competitors ship ethanol over long distances from the Midwest. Also, 
because our planned facilities are expected to be located in the Western United States, close proximity to 
major rail lines to receive corn shipments from Midwest producers is critical.  

-9- 

 
 
Potential Future Facilities and Expansions 

We intend to expand our production capacity to 220 million gallons of annual production capacity 

in 2008 upon completion of our facilities in Burley and Stockton and to 420 million gallons of annual 
production capacity in 2010, through new construction or acquisition of additional ethanol production 
facilities. In 2007, we began development of an ethanol production facility in the Imperial Valley near 
Calipatria, California; however, construction has been suspended until market conditions improve and we 
are able to obtain adequate financing. We will determine whether additional sites are suitable for 
construction of ethanol production facilities in the future. We intend to evaluate and pursue opportunities 
to acquire additional ethanol production, storage and distribution facilities and related infrastructure 
currently in operation as financial resources and business prospects make the acquisition of these facilities 
advisable. In addition, we may also seek to acquire facility sites under development. We are also 
investigating the feasibility of expanding one or more existing facilities to significantly increase 
production capacity. Such an expansion would entail constructing additional structures and systems 
adjacent to an existing facility and integrating certain processes.  

Marketing Arrangements 

We have exclusive agreements with third-party ethanol producers, including Phoenix Bio-
Industries, LLC, a subsidiary of Altra Inc., and Front Range, the latter of which we are a minority owner, 
to market and sell their entire ethanol production volumes. Phoenix Bio-Industries, LLC owns and 
operates an ethanol production facility in Goshen, California with annual nameplate production capacity 
of 25 million gallons. Front Range owns and operates an ethanol production facility in Windsor, Colorado 
with annual production capacity of up to 50 million gallons. We also have an exclusive agreement to 
market and sell WDG produced at the facility owned by Front Range. We intend to evaluate and pursue 
opportunities to enter into marketing arrangements with other ethanol producers as business prospects 
make these marketing arrangements advisable.  

Competition 

We operate in the highly competitive ethanol marketing and production industry. The largest 
ethanol producer in the United States is ADM, with wet and dry mill plants in the Midwest and a total 
production capacity of about 1.1 billion gallons per year, or approximately 17% of total United States 
ethanol production in 2007. According to the RFA, there are approximately 134 ethanol plants currently 
operating with a combined annual production capacity of approximately 7.2 billion gallons. In addition, 
we believe that approximately 50 new ethanol plants or expansions of existing plants are currently under 
construction with an estimated combined future annual production capacity of approximately 4.4 billion 
gallons. We believe that most of the growth in ethanol production over the last ten years has been by 
farmer-owned cooperatives that have commenced or expanded ethanol production as a strategy for 
enhancing demand for corn and adding value through processing. We believe that many smaller ethanol 
plants rely on marketing groups such as Ethanol Products, Aventine Renewable Energy, Inc. and 
Renewable Products Marketing Group LLC to move their product to market. We believe that, because 
ethanol is a commodity, many of the Midwest ethanol producers can target the Western United States, 
though ethanol producers further west in states such as Nebraska and Kansas often enjoy delivery cost 
advantages.  

We believe that our competitive strengths include our strategic locations in the Western United 

States, our extensive ethanol distribution network, our extensive customer and supplier relationships, our 
use of modern technologies at our production facilities and our experienced management. We believe that 
these advantages will allow us to capture an increasing share of the total market for ethanol and its co-
products and earn favorable margins on ethanol and its co-products that we produce.  

-10- 

 
Our strategic focus on particular geographic locations designed to exploit cost efficiencies may 
nevertheless result in higher than expected costs as a result of more expensive raw materials and related 
shipping costs, such as corn, which generally must be transported from the Midwest. If the costs of 
producing and shipping ethanol and its co-products over short distances is not advantageous relative to 
the costs of obtaining raw materials from the Midwest, then the planned benefits of our strategic locations 
may not be realized. 

Governmental Regulation 

Our business is subject to extensive and frequently changing federal, state and local laws and 

regulations relating to the protection of the environment. These laws, their underlying regulatory 
requirements and their enforcement, some of which are described below, impact, or may impact, our 
existing and proposed business operations by imposing: 

•  restrictions on our existing and proposed business operations and/or the need to install 

• 
• 

enhanced or additional controls; 
the need to obtain and comply with permits and authorizations; 
liability for exceeding applicable permit limits or legal requirements, in certain cases for 
the remediation of contaminated soil and groundwater at our facilities, contiguous and 
adjacent properties and other properties owned and/or operated by third parties; and 

•  specifications for the ethanol we market and produce. 

In addition, some of the governmental regulations to which we are subject are helpful to our 
ethanol marketing and production business. The ethanol fuel industry is greatly dependent upon tax 
policies and environmental regulations that favor the use of ethanol in motor fuel blends in North 
America. Some of the governmental regulations applicable to our ethanol marketing and production 
business are briefly described below. 

Federal Excise Tax Exemption 

Ethanol blends have been either wholly or partially exempt from the federal excise tax on 
gasoline since 1978. The exemption has ranged from $0.04 to $0.06 per gallon of gasoline during that 25-
year period. The current federal excise tax on gasoline is $0.184 per gallon, and is paid at the terminal by 
refiners and marketers. If the fuel is blended with ethanol, the blender may claim a $0.51 per gallon tax 
credit for each gallon of ethanol used in the mixture. The federal excise tax exemption was revised and its 
expiration date was extended for the sixth time since its inception as part of the American Jobs Creation 
Act of 2004. The new expiration date of the federal excise tax exemption is December 31, 2010. We 
believe that it is highly likely that this tax incentive will be extended beyond 2010 if Congress deems it 
necessary for the continued growth and prosperity of the ethanol industry. 

Clean Air Act Amendments of 1990 

In November 1990, a comprehensive amendment to the Clean Air Act of 1977 established a 

series of requirements and restrictions for gasoline content designed to reduce air pollution in identified 
problem areas of the United States. The two principal components affecting motor fuel content are the 
oxygenated fuels program, which is administered by states under federal guidelines, and a federally 
supervised reformulated gasoline, or RFG, program.  

-11- 

 
 
Oxygenated Fuels Program 

Federal law requires the sale of oxygenated fuels in certain carbon monoxide non-attainment 

MSAs during at least four winter months, typically November through February. Any additional MSAs 
not in compliance for a period of two consecutive years in subsequent years may also be included in the 
program. The Environmental Protection Agency, or EPA, Administrator is afforded flexibility in 
requiring a shorter or longer period of use depending upon available supplies of oxygenated fuels or the 
level of non-attainment. This law currently affects the Los Angeles area, where over 150 million gallons 
of ethanol are blended with gasoline each winter. 

Reformulated Gasoline Program 

The Clean Air Act Amendments of 1990 established special standards effective January 1, 1995 
for the most polluted ozone non-attainment areas: Los Angeles Area, Baltimore, Chicago Area, Houston 
Area, Milwaukee Area, New York City Area, Hartford, Philadelphia Area and San Diego, with provisions 
to add other areas in the future if conditions warrant. California’s San Joaquin Valley, the location of our 
Madera facility, was added in 2002. At the outset of the RFG program there were a total of 96 MSAs not 
in compliance with clean air standards for ozone, which represents approximately 60% of the national 
market. 

The RFG program also includes a provision that allows individual states to “opt into” the federal 

program by request of the governor, to adopt standards promulgated by California that are stricter than 
federal standards, or to offer alternative programs designed to reduce ozone levels. Nearly all of the 
Northeast and middle Atlantic areas from Washington, D.C. to Boston not under the federal mandate have 
“opted into” the federal standards. 

These state mandates in recent years have created a variety of gasoline grades to meet different 
regional environmental requirements. The RFG program accounts for about 30% of nationwide gasoline 
consumption. California refiners blend a minimum of 2.0% oxygen by weight, which is the equivalent of 
5.7% ethanol in every gallon of gasoline, or roughly 1.0 billion gallons of ethanol per year in California 
alone. 

National Energy Legislation 

In addition, the Energy Independence and Security Act of 2007, which was signed into law in 

December 2007, significantly increased the prior national RFS. The prior national RFS mandated the use 
of 5.4 billion gallons of renewable fuels in 2008, which was to rise incrementally and peak at 7.5 billion 
gallons by 2012. The new national RFS significantly increases the mandated use of renewable fuels to 9.0 
billion gallons in 2008, which is to rise incrementally and peak at 36.0 billion gallons by 2022. The new 
national RFS mandates for renewable fuel use increase each year, with corn-based or “conventional” 
ethanol reaching a peak of 15.0 billion gallons by 2015. Beginning in 2016, increases in the new national 
RFS targets must be met with advanced biofuels, defined as cellulosic ethanol and other biofuels derived 
from feedstock other than corn starch.  

State Energy Legislation and Regulations 

State energy legislation and regulations may affect the demand for ethanol. California recently 

passed legislation regulating the total emissions of CO2 from vehicles and other sources. In 2006, the 
State of Washington passed a statewide renewable fuel standard effective December 1, 2008. We believe 
other states may also enact their own renewable fuel standards.  

-12- 

 
In January 2007, California’s Governor signed an executive order directing the California Air 
Resource Board to implement a Low Carbon Fuels Standard for transportation fuels. The Governor’s 
office estimates that the standard will have the effect of increasing current renewable fuels use in 
California by three to five times by 2020. 

The State of Oregon implemented a state-wide renewable fuels standard effective January 2008. 

This standard requires a 10% ethanol blend in every gallon of gasoline and is expected to cause the use of 
approximately 160 million gallons of ethanol per year in Oregon. 

Additional Environmental Regulations 

In addition to the governmental regulations applicable to the ethanol marketing and production 

industries described above, our business is subject to additional federal, state and local environmental 
regulations, including regulations established by the EPA, the California Air Quality Management 
District, the San Joaquin Valley Air Pollution Control District and the California Air Resources Board. 
We cannot predict the manner or extent to which these regulations will harm or help our business or the 
ethanol production and marketing industry in general.  

Employees  

As of March 24, 2008, we employed approximately 220 persons on a full-time basis, including 
through our subsidiaries. We believe that our employees are highly-skilled, and our success will depend 
in part upon our ability to retain our employees and attract new qualified employees who are in great 
demand. We have never had a work stoppage or strike, and no employees are presently represented by a 
labor union or covered by a collective bargaining agreement. We consider our relations with our 
employees to be good. 

Item 1A.  Risk Factors. 

Risks Related to our Business 

We have incurred significant losses and negative operating cash flow in the past and we may 
incur significant losses and negative operating cash flow in the future. Continued losses and 
negative operating cash flow may hamper our operations and prevent us from expanding our 
business.  

We have incurred significant losses and negative operating cash flow in the past. For the years 

ended December 31, 2007, 2006 and 2005, we incurred net losses of approximately $14.4 million, 
$142,000 and $9.9 million, respectively. For the year ended December 31, 2006, we incurred negative 
operating cash flow of approximately $8.1 million. We expect to rely on cash on hand, cash, if any, 
generated from our operations and cash, if any, generated from our future financing activities to fund all 
of the cash requirements of our business. Continued losses and negative operating cash flow may hamper 
our operations and prevent us from expanding our business. Continued losses and negative operating cash 
flow are also likely to make our capital raising needs more acute while limiting our ability to raise 
additional financing on satisfactory terms.  

Various factors could result in inadequate working capital to fully fund our operations or meet 
our capital expenditure requirements, or both.  

If ethanol production margins deteriorate from current levels, if we experience additional cost 

overruns at our ethanol production facilities under construction, if our capital requirements or cash flows 

-13- 

 
otherwise vary materially and adversely from our current projections, or if other adverse unforeseen 
circumstances occur, our working capital may be inadequate to fully fund our operations or meet our 
capital expenditure requirements, or both, which may have a material adverse effect on our results of 
operations, liquidity and cash flows and may restrict our growth and hinder our ability to compete.   

We are seeking additional financing and may be unable to obtain this financing on a timely 
basis, in sufficient amounts, on terms acceptable to us or at all. Any financing we are able to 
obtain may require us to accept financing on burdensome terms that may cause significant 
dilution to our stockholders and impose onerous financial restrictions on our business. 

We are seeking substantial additional financing. Deteriorating global economic and debt and 

equity market conditions may cause prolonged declines in lender and investor confidence in and 
accessibility to capital markets. Future financing may not be available on a timely basis, in sufficient 
amounts, on terms acceptable to us or at all. Any equity financing may cause significant dilution to 
existing stockholders. Any debt financing or other financing of securities senior to our common stock will 
likely include financial and other covenants that will restrict our flexibility. At a minimum, we expect 
these covenants to include restrictions on our ability to pay dividends on our common stock. Any failure 
to comply with these covenants could have a material adverse effect on our business, prospects, financial 
condition and results of operations because we could lose any then-existing sources of financing and our 
ability to secure new financing may be impaired. In addition, any prospective debt or equity financing 
transaction will be subject to the negotiation of definitive documents and any closing under those 
documents will be subject to the satisfaction of numerous conditions, many of which could be beyond our 
control. We may be unable to obtain additional financing from one or more lenders or equity investors, or 
if funding is available, it may be available only on burdensome terms that may cause significant dilution 
to our stockholders and impose onerous financial restrictions on our business.  

Increased ethanol production may cause a decline in ethanol prices or prevent ethanol prices 
from rising, and may have other negative effects, adversely impacting our results of operations, 
cash flows and financial condition. 

We believe that the most significant factor influencing the price of ethanol has been the 

substantial increase in ethanol production in recent years. Domestic ethanol production capacity has 
increased steadily from an annualized rate of 1.7 billion gallons per year in January 1999 to 7.2 billion 
gallons per year according to the RFA. In addition, we believe that a significant amount of ethanol 
production capacity—approximately 4.4 billion gallons per year—is currently under construction. This 
production capacity is being added to address anticipated increases in demand, including from increased 
volume requirements under the Energy Independence and Security Act of 2007. See “Business—
Governmental Regulation.” However, increases in the demand for ethanol may not be commensurate with 
increases in the supply of ethanol, thus leading to lower ethanol prices. Demand for ethanol could be 
impaired due to a number of factors, including regulatory developments and reduced United States 
gasoline consumption. Reduced gasoline consumption could occur as a result of increased gasoline or oil 
prices. Increased ethanol production could also have other adverse effects. For example, increased ethanol 
production could lead to increased supplies of co-products generated from ethanol production, such as 
WDG. Those increased supplies could lead to lower prices for those co-products. Also, increased ethanol 
production could result in increased demand for corn. Increased demand for corn could cause higher corn 
prices, resulting in higher ethanol production costs and lower profit margins. We believe that significantly 
higher corn prices and lower profit margins throughout 2007 were predominantly caused by increased 
demand for corn resulting from increased ethanol production. Accordingly, increased ethanol production 
may cause a decline in ethanol prices or prevent ethanol prices from rising, and may have other negative 
effects, adversely impacting our results of operations, cash flows and financial condition.  

-14- 

 
The raw materials and energy necessary to produce ethanol may be unavailable or may 
increase in price, adversely affecting our business, results of operations and financial condition. 

The principal raw material we use to produce ethanol and its co-products is corn. Changes in the 

price of corn can significantly affect our business. In general, rising corn prices result in lower profit 
margins and, therefore, represent unfavorable market conditions. This is especially true since market 
conditions generally do not allow us to pass along increased corn prices to our customers because the 
price of ethanol is primarily determined by other factors, such as the supply of ethanol and the price of oil 
and gasoline. At certain levels, corn prices may even make ethanol production uneconomical depending 
on the prevailing price of ethanol. 

The price of corn is influenced by general economic, market and regulatory factors. These factors 

include weather conditions, crop conditions and yields, farmer planting decisions, government policies 
and subsidies with respect to agriculture and international trade and global supply and demand. The 
significance and relative impact of these factors on the price of corn is difficult to predict. Any event that 
tends to negatively impact the supply of corn will tend to increase prices and potentially harm our 
business. Average corn prices as measured by the Chicago Board of Trade increased 44% from 2006 to 
2007. The United States Department of Agriculture’s December 2007 crop report estimated that corn 
bought by ethanol plants will represent approximately 22% of the 2007/2008 crop year’s total corn 
supply, up from 17% in the prior crop year. We believe that significantly higher corn costs and lower 
profit margins throughout 2007 were substantially caused by increased demand for corn resulting from 
increased ethanol production. Additional increases in ethanol production could further boost demand for 
corn and result in further increases in corn prices.  

Our business also depends on the continuing availability of rail, road, port, storage and 
distribution infrastructure. In particular, due to limited storage capacity at our production facilities and 
other considerations related to production efficiencies, we depend on just-in-time delivery of corn. The 
production of ethanol also requires a significant and uninterrupted supply of other raw materials and 
energy, primarily water, electricity and natural gas. The prices of electricity and natural gas have 
fluctuated significantly in the past and may fluctuate significantly in the future. Local water, electricity 
and gas utilities may not be able to reliably supply the water, electricity and natural gas that our facilities 
will need or may not be able to supply those resources on acceptable terms. Any disruptions in the ethanol 
production infrastructure network, whether caused by labor difficulties, earthquakes, storms, other natural 
disasters or human error or malfeasance or other reasons, could prevent timely deliveries of corn or other 
raw materials and energy and may require us to halt production which could have a material adverse 
effect on our business, results of operations and financial condition. 

Numerous factors may prevent us from implementing our planned expansion strategy. 

Our strategy envisions a period of rapid growth. We plan to grow our business by investing in 
new facilities and/or acquiring existing facilities or sites under development as well as pursuing other 
business opportunities such as the production of other renewable fuels to the extent we deem those 
opportunities advisable. We believe that there is increasing competition for suitable production sites. We 
may not find suitable additional sites for construction of new facilities, suitable acquisition candidates or 
other suitable expansion opportunities.  

We will need substantial additional financing to achieve our business objectives and we may not 
have access to the funding required for the expansion of our business or funding may not be available to 
us on acceptable terms. We plan to fund the expansion of our business with additional debt and equity 
financing. We could face financial risks associated with incurring additional indebtedness, such as 
reducing our liquidity and access to financial markets and increasing the amount of cash flow required to 

-15- 

 
service such indebtedness, or associated with issuing additional stock, such as dilution of ownership and 
earnings. In addition, we are planning the financing of our expansion strategy and we are initially using 
our existing cash to implement this strategy based on the belief that we can secure additional debt and 
equity financing in the future in order to complete our expansion. If we are unable to secure this debt and 
equity financing, we may suffer from an acute lack of capital resources, our planned expansion strategy 
may be less successful than if we had planned solely on using our existing cash to finance our expansion, 
and our business and prospects may be materially and adversely affected. 

We must also obtain numerous regulatory approvals and permits in order to construct and operate 
additional or expanded production facilities. These requirements may not be satisfied in a timely manner 
or at all. Federal and state governmental requirements may substantially increase our costs, which could 
have a material adverse effect on our results of operations and financial condition. Our expansion plans 
may also result in other unanticipated adverse consequences, such as the diversion of management’s 
attention from our existing operations.  

Our construction costs may also increase to levels that would make a new production facility too 
expensive to complete or unprofitable to operate. We do not have any fixed-price construction contracts 
and we have experienced significant cost-overruns in the past and may experience additional cost-
overruns in the future. Contractors, engineering firms, construction firms and equipment suppliers also 
receive requests and orders from other ethanol companies and, therefore, we may not be able to secure 
their services or products on a timely basis or on acceptable financial terms. We may suffer significant 
delays or cost overruns as a result of a variety of factors, such as shortages of workers or materials, 
transportation constraints, adverse weather, unforeseen difficulties or labor issues, any of which could 
prevent us from commencing operations at our facilities as expected.  

Rapid growth may impose a significant burden on our administrative and operational resources. 

Our ability to effectively manage our growth will require us to substantially expand the capabilities of our 
administrative and operational resources and to attract, train, manage and retain qualified management, 
technicians and other personnel. We may be unable to do so. 

We engage in hedging transactions and other risk mitigation strategies that could harm our 
results of operations. 

In an attempt to partially offset the effects of volatility of ethanol prices and corn and natural gas 
costs, we often enter into contracts to supply a portion of our ethanol production or purchase a portion of 
our corn or natural gas requirements on a forward basis. In addition, we engage in other hedging 
transactions involving exchange-traded futures contracts for corn, natural gas and unleaded gasoline from 
time to time. The financial statement impact of these activities is dependent upon, among other things, the 
prices involved and our ability to sell sufficient products to use all of the corn and natural gas for which 
we have futures contracts. We also engage in hedging transactions involving interest rate swaps related to 
our debt financing activities, the financial statement impact of which is dependent upon, among other 
things, fluctuations in prevailing interest rates. Hedging arrangements also expose us to the risk of 
financial loss in situations where the other party to the hedging contract defaults on its contract or, in the 
case of exchange-traded contracts, where there is a change in the expected differential between the 
underlying price in the hedging agreement and the actual prices paid or received by us. Hedging activities 
can themselves result in losses when a position is purchased in a declining market or a position is sold in 
a rising market. A hedge position for a physical commodity is often settled in the same time frame as the 
physical commodity is either purchased or sold. Certain hedging losses may be offset by a decreased cash 
price for corn and natural gas and an increased cash price for ethanol. We also vary the amount of 
hedging or other risk mitigation strategies we undertake, and from time to time we may choose not to 
engage in hedging transactions at all. As a result, our results of operations and financial position may be 

-16- 

 
adversely affected by fluctuations in the price of corn, natural gas, ethanol, unleaded gasoline and 
prevailing interest rates. 

The market price of ethanol is volatile and subject to large fluctuations, which may cause our 
profitability or losses to fluctuate significantly. 

The market price of ethanol is volatile and subject to large fluctuations. The market price of 

ethanol is dependent upon many factors, including the supply of ethanol and the price of gasoline, which 
is in turn dependent upon the price of petroleum which is highly volatile and difficult to forecast. For 
example, our average sales price of ethanol in 2007 declined by approximately 6% from our 2006 average 
sales price per gallon, but increased 37% in 2006 from our 2005 average sales price per gallon. 
Fluctuations in the market price of ethanol may cause our profitability or losses to fluctuate significantly.  

We have identified two material weaknesses in our internal control over financial reporting and 
cannot assure you that additional material weaknesses will not be identified in the future. If our 
internal control over financial reporting or disclosure controls and procedures are not effective, 
there may be errors in our financial statements that could require a restatement or our filings 
may not be timely and investors may lose confidence in our reported financial information, 
which could lead to a decline in our stock price.  

Section 404 of the Sarbanes-Oxley Act of 2002 requires us to evaluate the effectiveness of our 
internal control over financial reporting as of the end of each year, and to include a management report 
assessing the effectiveness of our internal control over financial reporting in each Annual Report on Form 
10-K. Section 404 also requires our independent registered public accounting firm to attest to, and report 
on, management’s assessment of our internal control over financial reporting. We have identified the 
following two material weaknesses in our internal control over financial reporting that existed as of 
December 31, 2007:  (i) we did not have adequate internal control over our accrual of construction-related 
costs for our ethanol production facilities; and (ii) we did not exercise oversight of our personnel or their 
actions in a manner reasonably calculated to ensure compliance under the Credit Agreement governing 
our credit facility. See “Controls and Procedures.” 

Our management, including our Chief Executive Officer and Chief Financial Officer, does not 

expect that our internal control over financial reporting will prevent all errors and all fraud. A control 
system, no matter how well designed and operated, can provide only reasonable, not absolute, assurance 
that the control system’s objectives will be met. Further, the design of a control system must reflect the 
fact that there are resource constraints, and the benefits of controls must be considered relative to their 
costs. Controls can be circumvented by the individual acts of some persons, by collusion of two or more 
people, or by management override of the controls. Over time, controls may become inadequate because 
changes in conditions or deterioration in the degree of compliance with policies or procedures may occur. 
Because of the inherent limitations in a cost-effective control system, misstatements due to error or fraud 
may occur and not be detected.  

As a result, we cannot assure you that significant deficiencies or material weaknesses in our 

internal control over financial reporting will not be identified in the future. Any failure to maintain or 
implement required new or improved controls, or any difficulties we encounter in their implementation, 
could result in significant deficiencies or material weaknesses, cause us to fail to timely meet our periodic 
reporting obligations, or result in material misstatements in our financial statements. Any such failure 
could also adversely affect the results of periodic management evaluations and annual auditor attestation 
reports regarding disclosure controls and the effectiveness of our internal control over financial reporting 
required under Section 404 of the Sarbanes-Oxley Act of 2002 and the rules promulgated thereunder. The 
existence of a material weakness could result in errors in our financial statements that could result in a 

-17- 

 
restatement of financial statements, cause us to fail to timely meet our reporting obligations and cause 
investors to lose confidence in our reported financial information, leading to a decline in our stock price. 

Operational difficulties at our production facilities could negatively impact our sales volumes 
and could cause us to incur substantial losses. 

Our operations are subject to labor disruptions, unscheduled downtime and other operational 

hazards inherent in our industry, such as equipment failures, fires, explosions, abnormal pressures, 
blowouts, pipeline ruptures, transportation accidents and natural disasters. Some of these operational 
hazards may cause personal injury or loss of life, severe damage to or destruction of property and 
equipment or environmental damage, and may result in suspension of operations and the imposition of 
civil or criminal penalties. Our insurance may not be adequate to fully cover the potential operational 
hazards described above or we may not be able to renew this insurance on commercially reasonable terms 
or at all. 

Moreover, our plants may not operate as planned or expected. All of our plants are designed to 
operate at or above a certain production capacity. The operation of our plants is and will be, however, 
subject to various uncertainties. As a result, our plants may not produce ethanol and WDG at the levels 
we expect. In the event any of our plants do not run at their expected capacity levels, our business, results 
of operations and financial condition may be materially and adversely affected. 

The United States ethanol industry is highly dependent upon a myriad of federal and state 
legislation and regulation and any changes in such legislation or regulation could have a 
material adverse effect on our results of operations and financial condition. 

The elimination or significant reduction in the Federal Excise Tax Credit could have a material 
adverse effect on our results of operations. 

The production of ethanol is made significantly more competitive by federal tax incentives. The 

federal excise tax incentive program, which is scheduled to expire on December 31, 2010, allows gasoline 
distributors who blend ethanol with gasoline to receive a federal excise tax rate reduction for each 
blended gallon they sell regardless of the blend rate. The current federal excise tax on gasoline is $0.184 
per gallon, and is paid at the terminal by refiners and marketers. If the fuel is blended with ethanol, the 
blender may claim a $0.51 per gallon tax credit for each gallon of ethanol used in the mixture. The federal 
excise tax incentive program may not be renewed prior to its expiration in 2010, or if renewed, it may be 
renewed on terms significantly less favorable than current tax incentives. The elimination or significant 
reduction in the federal excise tax incentive program could have a material adverse effect on our results of 
operations.  

Waivers or repeal of the national RFS minimum levels of renewable fuels included in gasoline 
could have a material adverse affect on our results of operations. 

Shortly after passage of the Energy Independence and Security Act of 2007, which increased the 

minimum mandated required usage of ethanol, a Congressional sub-committee held hearings on the 
potential impact of the new national RFS on commodity prices. While no action was taken by the sub-
committee towards repeal of the new national RFS, any attempt by Congress to re-visit, repeal or grant 
waivers of the new national RFS could adversely affect demand for ethanol and could have a material 
adverse effect on our results of operations and financial condition. 

-18- 

 
While the Energy Independence and Security Act of 2007 imposes the national RFS, it does not 
mandate only the use of ethanol. 

The Energy Independence and Security Act of 2007 imposes the national RFS, but does not 
mandate only the use of ethanol.  While the RFA expects that ethanol should account for the largest share 
of renewable fuels produced and consumed under the national RFS, the national RFS is not limited to 
ethanol and also includes biodiesel and any other liquid fuel produced from biomass or biogas.  

The ethanol production and marketing industry is extremely competitive. Many of our 
significant competitors have greater production and financial resources than we do and one or 
more of these competitors could use their greater resources to gain market share at our 
expense. In addition, certain of our suppliers may circumvent our marketing services, causing 
our sales and profitability to decline. 

The ethanol production and marketing industry is extremely competitive. Many of our significant 

competitors in the ethanol production and marketing industry, such as ADM, Cargill, Inc., VeraSun 
Energy Corporation, Aventine Renewable Energy, Inc. and Abengoa Bioenergy Corp., have substantially 
greater production and financial resources than we do. As a result, our competitors may be able to 
compete more aggressively and sustain that competition over a longer period of time than we could. 
Successful competition will require a continued high level of investment in marketing and customer 
service and support. Our lack of resources relative to many of our significant competitors may cause us to 
fail to anticipate or respond adequately to new developments and other competitive pressures. This failure 
could reduce our competitiveness and cause a decline in our market share, sales and profitability. Even if 
sufficient funds are available, we may not be able to make the modifications and improvements necessary 
to successfully compete. 

We also face increasing competition from international suppliers. Currently, international 

suppliers produce ethanol primarily from sugar cane and have cost structures that are generally 
substantially lower than ours. Any increase in domestic or foreign competition could cause us to reduce 
our prices and take other steps to compete effectively, which could adversely affect our results of 
operations and financial condition. 

In addition, some of our suppliers are potential competitors and, especially if the price of ethanol 

reaches historically high levels, they may seek to capture additional profits by circumventing our 
marketing services in favor of selling directly to our customers. If one or more of our major suppliers, or 
numerous smaller suppliers, circumvent our marketing services, our sales and profitability may decline.  

The high concentration of our sales within the ethanol marketing and production industry 
could result in a significant reduction in sales and negatively affect our profitability if demand 
for ethanol declines.  

We expect to be completely focused on the marketing and production of ethanol and its co-

products for the foreseeable future. We may be unable to shift our business focus away from the 
marketing and production of ethanol to other renewable fuels or competing products. Accordingly, an 
industry shift away from ethanol or the emergence of new competing products may reduce the demand for 
ethanol. A downturn in the demand for ethanol would likely materially and adversely affect our sales and 
profitability. 

-19- 

 
We produce and sell our own ethanol but also depend on a small number of third-party 
suppliers for a significant portion of the ethanol that we sell. If any of these suppliers does not 
continue to supply us with ethanol in adequate amounts, we may be unable to satisfy the 
demands of our customers and our sales, profitability and relationships with our customers will 
be adversely affected. 

We produce and sell our own ethanol but also depend on a small number of third-party suppliers 

for a significant portion of the ethanol that we sell. Our largest third-party ethanol suppliers, each of 
whom accounted for 10% or more of total ethanol purchases, represented approximately 68% and 50% of 
the total ethanol we purchased during 2007 and 2006, respectively. We expect to continue to depend for 
the foreseeable future upon a small number of third-party suppliers for a significant portion of the ethanol 
that we sell. Our third-party suppliers are primarily located in the Midwestern United States. The delivery 
of ethanol from these suppliers is therefore subject to delays resulting from inclement weather and other 
conditions. If any of these suppliers is unable or declines for any reason to continue to supply us with 
ethanol in adequate amounts, we may be unable to replace that supplier and source other supplies of 
ethanol in a timely manner, or at all, to satisfy the demands of our customers. If this occurs, our sales, 
profitability and our relationships with our customers will be adversely affected. 

We may be adversely affected by environmental, health and safety laws, regulations and 
liabilities. 

We are subject to various federal, state and local environmental laws and regulations, including 

those relating to the discharge of materials into the air, water and ground, the generation, storage, 
handling, use, transportation and disposal of hazardous materials, and the health and safety of our 
employees. In addition, some of these laws and regulations require our facilities to operate under permits 
that are subject to renewal or modification. These laws, regulations and permits can often require 
expensive pollution control equipment or operational changes to limit actual or potential impacts to the 
environment. A violation of these laws and regulations or permit conditions can result in substantial fines, 
natural resource damages, criminal sanctions, permit revocations and/or facility shutdowns. In addition, 
we have made, and expect to make, significant capital expenditures on an ongoing basis to comply with 
increasingly stringent environmental laws, regulations and permits.  

We may be liable for the investigation and cleanup of environmental contamination at each of the 
properties that we own or operate and at off-site locations where we arrange for the disposal of hazardous 
substances. If these substances have been or are disposed of or released at sites that undergo investigation 
and/or remediation by regulatory agencies, we may be responsible under the Comprehensive 
Environmental Response, Compensation and Liability Act of 1980, or other environmental laws for all or 
part of the costs of investigation and/or remediation, and for damages to natural resources. We may also 
be subject to related claims by private parties alleging property damage and personal injury due to 
exposure to hazardous or other materials at or from those properties. Some of these matters may require 
us to expend significant amounts for investigation, cleanup or other costs.  

In addition, new laws, new interpretations of existing laws, increased governmental enforcement 

of environmental laws or other developments could require us to make additional significant 
expenditures. Continued government and public emphasis on environmental issues can be expected to 
result in increased future investments for environmental controls at our production facilities. Present and 
future environmental laws and regulations (and interpretations thereof) applicable to our operations, more 
vigorous enforcement policies and discovery of currently unknown conditions may require substantial 
expenditures that could have a material adverse effect on our results of operations and financial condition.  

-20- 

 
The hazards and risks associated with producing and transporting our products (such as fires, 
natural disasters, explosions and abnormal pressures and blowouts) may also result in personal injury 
claims or damage to property and third parties. As protection against operating hazards, we maintain 
insurance coverage against some, but not all, potential losses. However, we could sustain losses for 
uninsurable or uninsured risks, or in amounts in excess of existing insurance coverage. Events that result 
in significant personal injury or damage to our property or third parties or other losses that are not fully 
covered by insurance could have a material adverse effect on our results of operations and financial 
condition.  

We depend on a small number of customers for the majority of our sales. A reduction in 
business from any of these customers could cause a significant decline in our overall sales and 
profitability. 

The majority of our sales are generated from a small number of customers. During 2007, sales to 

our two largest customers, each of whom accounted for 10% or more of total net sales, represented an 
aggregate of approximately 32% of our total net sales. During 2006, sales to our two largest customers, 
each of whom accounted for 10% or more of total net sales, represented an aggregate of approximately 
25% of our total net sales. We expect that we will continue to depend for the foreseeable future upon a 
small number of customers for a significant portion of our sales. Our agreements with these customers 
generally do not require them to purchase any specified amount of ethanol or dollar amount of sales or to 
make any purchases whatsoever. Therefore, in any future period, our sales generated from these 
customers, individually or in the aggregate, may not equal or exceed historical levels. If sales to any of 
these customers cease or decline, we may be unable to replace these sales with sales to either existing or 
new customers in a timely manner, or at all. A cessation or reduction of sales to one or more of these 
customers could cause a significant decline in our overall sales and profitability. 

Our lack of long-term ethanol orders and commitments by our customers could lead to a rapid 
decline in our sales and profitability. 

We cannot rely on long-term ethanol orders or commitments by our customers for protection 

from the negative financial effects of a decline in the demand for ethanol or a decline in the demand for 
our marketing services. The limited certainty of ethanol orders can make it difficult for us to forecast our 
sales and allocate our resources in a manner consistent with our actual sales. Moreover, our expense 
levels are based in part on our expectations of future sales and, if our expectations regarding future sales 
are inaccurate, we may be unable to reduce costs in a timely manner to adjust for sales shortfalls. 
Furthermore, because we depend on a small number of customers for a significant portion of our sales, 
the magnitude of the ramifications of these risks is greater than if our sales were less concentrated. As a 
result of our lack of long-term ethanol orders and commitments, we may experience a rapid decline in our 
sales and profitability. 

We are a minority member of Front Range with limited control over that entity’s business 
decisions. We are therefore dependent upon the business judgment and conduct of the manager 
and majority member of that entity. As a result, our interests may not be as well served as if we 
were in control of Front Range, which could adversely affect its contribution to our results of 
operations and our business prospects related to that entity. 

Front Range operates an ethanol production facility located in Windsor, Colorado. We own 

approximately 42% of Front Range, which represents a minority interest in that entity. The manager and 
majority member of Front Range owns approximately 54% of that entity and has control of that entity’s 
business decisions, including those related to day-to-day operations. The manager and majority member 
of Front Range has the right to set the manager’s compensation, determine cash distributions, decide 

-21- 

 
whether or not to expand the ethanol production facility and make most other business decisions on behalf 
of that entity. We are therefore largely dependent upon the business judgment and conduct of the manager 
and majority member of Front Range. As a result, our interests may not be as well served as if we were in 
control of Front Range. Accordingly, the contribution by Front Range to our results of operations and our 
business prospectus related to that entity may be adversely affected by our lack of control over that entity. 

Risks Related to our Common Stock 

Our common stock has a small public float and shares of our common stock eligible for public 
sale could cause the market price of our stock to drop, even if our business is doing well, and 
make it difficult for us to raise additional capital through sales of equity securities. 

As of March 24, 2008, we had outstanding approximately 40.7 million shares of our common 
stock. Approximately 7.1 million of these shares were restricted under the Securities Act of 1933, or 
Securities Act, including approximately 4.7 million shares owned, in the aggregate, by our executive 
officers, directors and 10% stockholders. Accordingly, our common stock has a relatively small public 
float of approximately 33.6 million shares. 

We have registered for resale a substantial number of shares of our common stock, including 
approximately 10.6 million shares of our common stock underlying our Series A Preferred Stock. The 
holder of these shares is permitted, subject to few limitations, to freely sell these shares of common stock. 
As a result of our relatively small public float, sales of substantial amounts of common stock, or in 
anticipation that such sales could occur, may materially and adversely affect prevailing market prices for 
our common stock. In addition, any adverse effect on the market price of our common stock could make it 
difficult for us to raise additional capital through sales of equity securities at a time and at a price that we 
deem appropriate. 

As a result of our issuance of shares of Series A Preferred Stock to Cascade Investment, L.L.C. 
and our issuance of Series B Preferred Stock to Lyles United, LLC, our common stockholders 
may experience numerous negative effects and most of the rights of our common stockholders 
will be subordinate to the rights of the holders of our preferred stock. 

As a result of our issuance of shares of Series A Preferred Stock to Cascade Investment, L.L.C. 

and our issuance of Series B Preferred Stock to Lyles United, LLC, our common stockholders may 
experience numerous negative effects, including dilution from dividends paid in preferred stock and 
certain antidilution adjustments. In addition, rights in favor of the holders of our preferred stock include: 
seniority in liquidation and dividend preferences; substantial voting rights; numerous protective 
provisions; as to the holder of our Series A Preferred Stock, the right to appoint two persons to our board 
of directors and periodically nominate two persons for election by our stockholders to our board of 
directors; preemptive rights; and redemption rights. Also, our outstanding preferred stock could have the 
effect of delaying, deferring and discouraging another party from acquiring control of Pacific Ethanol. In 
addition, based on our current number of shares of common stock outstanding, Cascade Investment, 
L.L.C. has approximately 19% and Lyles United, LLC has approximately 13% of all outstanding voting 
power as compared to approximately 8% of all outstanding voting power held in aggregate by our current 
executive officers and directors. Also, in the event that we are profitable, our preferred stock would 
likewise result in a decrease in our diluted earnings per share by an aggregate of approximately 31%, 
without taking into account cash or stock payable as dividends on our preferred stock. Any of the above 
factors may materially and adversely affect our common stockholders and the values of their investments 
in our common stock.   

-22- 

 
 
Our stock price is highly volatile, which could result in substantial losses for investors 
purchasing shares of our common stock and in litigation against us. 

The market price of our common stock has fluctuated significantly in the past and may continue 

to fluctuate significantly in the future. The market price of our common stock may continue to fluctuate in 
response to one or more of the following factors, many of which are beyond our control: 

• 

• 
• 
• 
• 

• 
• 
• 
• 
• 
• 

• 

changing conditions in the ethanol and fuel markets as well as other commodity markets 
such as corn; 
the volume and timing of the receipt of orders for ethanol from major customers; 
competitive pricing pressures; 
our ability to produce, sell and deliver ethanol on a cost-effective and timely basis; 
the introduction and announcement of one or more new alternatives to ethanol by our 
competitors; 
changes in market valuations of similar companies; 
stock market price and volume fluctuations generally; 
regulatory developments or increased enforcement; 
fluctuations in our quarterly or annual operating results; 
additions or departures of key personnel; 
our inability to obtain construction, acquisition, capital equipment and/or working capital 
financing; and 
future sales of our common stock or other securities. 

Furthermore, we believe that the economic conditions in California and other Western states, as 
well as the United States as a whole, could have a negative impact on our results of operations. Demand 
for ethanol could also be adversely affected by a slow-down in overall demand for oxygenate and 
gasoline additive products. The levels of our ethanol production and purchases for resale will be based 
upon forecasted demand. Accordingly, any inaccuracy in forecasting anticipated revenues and expenses 
could adversely affect our business. The failure to receive anticipated orders or to complete delivery in 
any quarterly period could adversely affect our results of operations for that period. Quarterly results are 
not necessarily indicative of future performance for any particular period, and we may not experience 
revenue growth or profitability on a quarterly or an annual basis. 

The price at which you purchase shares of our common stock may not be indicative of the price 

that will prevail in the trading market. You may be unable to sell your shares of common stock at or 
above your purchase price, which may result in substantial losses to you and which may include the 
complete loss of your investment. In the past, securities class action litigation has often been brought 
against a company following periods of stock price volatility. We may be the target of similar litigation in 
the future. Securities litigation could result in substantial costs and divert management’s attention and our 
resources away from our business.  

Any of the risks described above could have a material adverse effect on our sales and 

profitability and also the price of our common stock. 

Item 1B.  Unresolved Staff Comments. 

None. 

-23- 

 
 
Item 2.  Properties. 

Our corporate headquarters, located in Sacramento, California, consists of a 10,000 square foot 

office leased for approximately five years. We also rent, under a two-year lease, an office in Fresno, 
California, consisting of 2,000 square feet and, under a five-year lease, an office in Portland, Oregon, 
consisting of 3,500 square feet.  

Our completed ethanol production facilities are located in Madera, California, at which a 137 acre 

facility is located, Boardman, Oregon, at which a 25 acre facility is located and Windsor, Colorado, at 
which a 40 acre facility is located. We are a minority owner of the entity that owns the Windsor, Colorado 
facility. We have acquired sites or options with respect to sites for three other potential ethanol production 
facilities that we may develop, or which are currently under development or construction, including sites 
at Burley, Idaho and Stockton, California. See “Business—Production Facilities.” 

Item 3.  Legal Proceedings.  

We are subject to legal proceedings, claims and litigation arising in the ordinary course of 
business. While the amounts claimed may be substantial, the ultimate liability cannot presently be 
determined because of considerable uncertainties that exist. Therefore, it is possible that the outcome of 
those legal proceedings, claims and litigation could adversely affect our quarterly or annual operating 
results or cash flows when resolved in a future period. However, based on facts currently available, 
management believes such matters will not adversely affect our financial position, results of operations or 
cash flows. 

Barry Spiegel – State Court Action 

On December 23, 2005, Barry J. Spiegel, a former shareholder and director of our predecessor, 

Accessity Corp., or Accessity, filed a complaint in the Circuit Court of the 17th Judicial District in and for 
Broward County, Florida (Case No. 05018512), or State Court Action, against Barry Siegel, Philip Kart, 
Kenneth Friedman and Bruce Udell, or collectively, the Individual Defendants. Messrs. Siegel, Udell and 
Friedman are former directors of Accessity and Pacific Ethanol. Mr. Kart is a former executive officer of 
Accessity and Pacific Ethanol. 

The State Court Action relates to the Share Exchange Transaction and purports to state the 

following five counts against the Individual Defendants: (i) breach of fiduciary duty, (ii) violation of the 
Florida Deceptive and Unfair Trade Practices Act, (iii) conspiracy to defraud, (iv) fraud and (v) violation 
of Florida’s Securities and Investor Protection Act. Mr. Spiegel based his claims on allegations that the 
actions of the Individual Defendants in approving the Share Exchange Transaction caused the value of his 
Accessity common stock to diminish and is seeking $22.0 million in damages. On March 8, 2006, the 
Individual Defendants filed a motion to dismiss the State Court Action. Mr. Spiegel filed his response in 
opposition on May 30, 2006. The Court granted the motion to dismiss by Order dated December 1, 2006, 
or the Order, on the grounds that, among other things, Mr. Spiegel failed to bring his claims as a 
derivative action.  

On February 9, 2007, Mr. Spiegel filed an amended complaint which purported to state the 

following five counts: (i) breach of fiduciary duty, (ii) fraudulent inducement, (iii) violation of Florida’s 
Securities and Investor Protection Act, (iv) fraudulent concealment, and (v) breach of fiduciary duty of 
disclosure. The amended complaint includes Pacific Ethanol as a defendant. The breach of fiduciary duty 
counts are alleged solely against the Individual Defendants and not Pacific Ethanol. On June 19, 2007, we 
filed a motion to dismiss the amended complaint. The Court denied the motion to dismiss the amended 

-24- 

 
complaint by order dated July 31, 2007. Mr. Spiegel, however, voluntarily dismissed without prejudice 
the case against us on August 27, 2007, and therefore we are no longer a party to the state action. 

Barry Spiegel – Federal Court Action 

On December 22, 2006, Barry J. Spiegel, filed a complaint in the United States District Court, 

Southern District of Florida (Case No. 06-61848), or Federal Court Action, against the Individual 
Defendants and Pacific Ethanol. The Federal Court Action relates to the Share Exchange Transaction and 
purports to state the following three counts: (i) violations of Section 14(a) of the Exchange Act and Rule 
14a-9 promulgated thereunder, (ii) violations of Section 10(b) of the Exchange Act and Rule 10b-5 
promulgated thereunder and (iii) violation of Section 20(A) of the Exchange Act. The first two counts are 
alleged against the Individual Defendants and Pacific Ethanol and the third count is alleged solely against 
the Individual Defendants. Mr. Spiegel bases his claims on, among other things, allegations that the 
actions of the Individual Defendants and Pacific Ethanol in connection with the Share Exchange 
Transaction resulted in a share exchange ratio that was unfair and resulted in the preparation of a proxy 
statement seeking shareholder approval of the Share Exchange Transaction that contained material 
misrepresentations and omissions. Mr. Spiegel is seeking in excess of $15.0 million in damages. Mr. 
Spiegel amended the Federal Court Action on February 9, 2007 and then sought to stay his own federal 
case, but the Motion was denied on July 17, 2007. Mr. Spiegel filed his reply to our Motion to Dismiss 
and that Motion remains pending. We intend to vigorously defend the Federal Court Action. 

Mercator Group, LLC 

In 2003, Accessity filed a lawsuit seeking damages in excess of $100 million against: (i) 
Presidion Corporation, f/k/a MediaBus Networks, Inc., the parent corporation of Presidion Solutions, Inc., 
or Presidion,  (ii) Presidion’s investment bankers, Mercator Group, LLC, or Mercator, and various related 
and affiliated parties, and (iii) Taurus Global LLC, or Taurus, (collectively referred to as the “Mercator 
Action”), alleging that these parties committed a number of wrongful acts, including, but not limited to 
tortiously interfering in the transaction between Accessity and Presidion. In 2004, Accessity dismissed 
this lawsuit without prejudice, which was filed in Florida state court. In January 2005, Accessity refiled 
this action in the State of California, for a similar amount, as Accessity believed that this was the proper 
jurisdiction. On August 18, 2005, the court stayed the action and ordered the parties to arbitration. The 
parties agreed to mediate the matter. Mediation took place on December 9, 2005 and was not successful. 
On December 5, 2005, we filed a Demand for Arbitration with the American Arbitration Association. On 
April 6, 2006, a single arbitrator was appointed. Arbitration hearings had been scheduled to commence in 
July 2007. In April 2007, the arbitration proceedings were suspended due to non-payment of arbitration 
fees by Presidion and Taurus. As a result of non-payment of arbitration fees, a default order was entered 
against Taurus by the Los Angeles Superior Court. In July, 2007, we entered into a confidential 
settlement agreement with Presidion and its former officers. On July 23, 2007, we dismissed Presidion 
from the arbitration. On July 23, 2007, Taurus filed a Voluntary Petition for Chapter 7 Bankruptcy in the 
United States District Court, Central District of California, Case Number SV07-12547 GM. The 
arbitration hearings against Mercator began on February 11, 2008 and concluded on February 19, 2008. 
After the hearings concluded but prior to an award being issued, the parties engaged in a two day 
mediation. As a result of the mediation, the parties entered into a confidential settlement agreement. The 
share exchange agreement relating to the Share Exchange Transaction provides that following full and 
final settlement or other final resolution of the Mercator Action, after deduction of all fees and expenses 
incurred by the law firm representing us in this action and payment of the 25% contingency fee to the law 
firm, shareholders of record of Accessity on the date immediately preceding the closing date of the Share 
Exchange Transaction will receive two-thirds and we will retain the remaining one-third of the net 
proceeds from any Mercator Action recovery.  

-25- 

 
Item 4.  Submission of Matters to a Vote of Security Holders. 

None. 

PART II  

Item 5. Market For Registrant’s Common Equity, Related Stockholder Matters and Issuer 

Purchases of Equity Securities. 

Market Information 

Our common stock has been traded on the Nasdaq Global Market (formerly, the Nasdaq National 
Market) under the symbol “PEIX” since October 10, 2005. Prior to October 10, 2005 and since March 24, 
2005, our common stock traded on the Nasdaq Capital Market (formerly, the Nasdaq SmallCap Market) 
under the symbol “PEIX.” Prior to March 24, 2005, our common stock traded on the Nasdaq SmallCap 
Market under the symbol “ACTY.” The table below shows, for each fiscal quarter indicated, the high and 
low closing prices for shares of our common stock. This information has been obtained from The Nasdaq 
Stock Market. The prices shown reflect inter-dealer prices, without retail mark-up, mark-down or 
commission, and may not necessarily represent actual transactions. 

Price Range 
Low 
High 

Year Ended December 31, 2007: 
First Quarter (January 1 – March 31) ................................................................
Second Quarter (April 1 – June 30) ................................................................
Third Quarter (July 1 – September 30) ................................................................
Fourth Quarter (October 1 – December 31) ................................................................

  $ 17.85   $ 14.22 
  $ 16.50   $ 12.25 
  $ 14.86   $  8.58 
  $  9.46   $  4.22 

Year Ended December 31, 2006: 
First Quarter ................................................................................................  $ 22.34   $  9.99 
  $ 42.39   $ 20.14 
Second Quarter ................................................................................................
  $ 25.45   $ 13.76 
Third Quarter ................................................................................................
  $ 19.08   $ 12.58 
Fourth Quarter ................................................................................................

Security Holders 

As of March 24, 2008, we had 40,674,464 shares of common stock outstanding and held of 

record by approximately 500 stockholders. These holders of record include depositories that hold shares 
of stock for brokerage firms which, in turn, hold shares of stock for numerous beneficial owners. On 
March 24, 2008, the closing sale price of our common stock on the Nasdaq Global Market was $4.94 per 
share. 

Performance Graph  

The graph below shows a comparison of the cumulative total stockholder return on our common 

stock with the cumulative total return on The NASDAQ Stock Market (U.S.) Index and of public 
companies filing reports with the Securities and Exchange Commission under Standard Industrial 
Classification Code 2860—Industrial Organic Chemicals, or Peer Group, in each case over the five-year 
period ended December 31, 2007.  

-26- 

 
 
 
 
 
 
 
 
 
 
 
The graph includes the date of March 23, 2005, the date of the Share Exchange Transaction and 

the date on which we effectively began operating in a business properly categorized under Standard 
Industrial Classification Code 2860—Industrial Organic Chemicals. Our predecessor, Accessity, was in 
an unrelated business prior to March 23, 2005. See “Business—Company History.” 

The graph assumes $100 invested at the indicated starting date in our common stock and in each 
of The NASDAQ Stock Market (U.S.) Index and the Peer Group, with the reinvestment of all dividends. 
We have not paid or declared any cash dividends on our common stock and do not anticipate paying any 
cash dividends in the foreseeable future. Stockholder returns over the indicated periods should not be 
considered indicative of future stock prices or stockholder returns. This graph assumes that the value of 
the investment in our common stock and each of the comparison groups was $100 on December 31, 2002. 

COMPARISON OF CUMULATIVE TOTAL RETURN FOR
THE FIVE-YEAR PERIOD ENDED DECEMBER 31, 2007

$1,200

$1,000

$800

$600

$400

$200

$0

12/02

12/03

12/04

3/23/05

12/05

12/06

12/07

Pacific Ethanol, Inc.
NASDAQ Composite Index
SIC 2860 — Industrial Organic Chemicals

PACIFIC ETHANOL, INC. 
THE NASDAQ STOCK MARKET 

(U.S.) INDEX 

SIC 2860—INDUSTRIAL 

ORGANIC CHEMICALS 

Dividend Policy 

12/02 

12/03 

Cumulative Total Return ($) 
12/05 
3/23/05 
12/04 

12/06 

12/07 

100.00 

151.61 

382.58 

583.87 

698.06 

992.90 

529.68 

100.00 

149.75 

164.64 

155.75 

168.60 

187.83 

205.22 

100.00 

117.59 

148.52 

139.73 

123.21 

180.97 

144.37 

We have never paid cash dividends on our common stock and do not intend to pay cash dividends 

on our common stock in the foreseeable future. We anticipate that we will retain any earnings for use in 
the continued development of our business. 

Our current and future debt financing arrangements may limit or prevent cash distributions from 

our subsidiaries to us, depending upon the achievement of certain financial and other operating conditions 
and our ability to properly service the debt, thereby limiting or preventing us from paying cash dividends. 
In addition, the holders of our preferred stock are entitled to dividends of 5%, and those dividends must 
be paid prior to the payment of any dividends to our common stockholders. 

-27- 

 
 
 
 
Recent Sales of Unregistered Securities 

None. 

Purchases of Equity Securities by the Issuer and Affiliated Purchasers 

We have granted to certain employees and directors shares of restricted stock under our 2006 

Stock Incentive Plan pursuant to Restricted Stock Agreements dated and effective as of their respective 
grant dates by and between us and those employees and directors. Since October 4, 2006, we have granted 
an aggregate of 869,239 shares of restricted stock, net of deemed repurchases and cancellations, to our 
employees and directors, of which an aggregate of 421,145 shares of restricted stock had vested as of 
December 31, 2007. Future vesting is subject to various restrictions. 

We were obligated to withhold minimum withholding tax amounts with respect to vested shares 

of restricted stock and upon future vesting of shares of restricted stock granted to our employees. Each 
employee was entitled to pay the minimum withholding tax amounts to us in cash or to elect to have us 
withhold a vested amount of shares of restricted stock having a value equivalent to our minimum 
withholding tax requirements, thereby reducing the number of shares of vested restricted stock that the 
employee ultimately receives. If an employee failed to timely make such election, we automatically 
withheld the necessary shares of vested restricted stock.  

In connection with satisfying our withholding requirements, during the fourth quarter of 2007, we 

withheld an aggregate of 17,464 shares of our common stock and remitted a cash payment to cover the 
minimum withholding tax amounts, thereby effectively repurchasing from the employees the 17,464 
shares of common stock at a deemed purchase price equal to $9.30 per share for an aggregate purchase 
price of $162,415. 

-28- 

 
Item 6.  Selected Financial Data. 

The following financial information should be read in conjunction with the consolidated audited 

financial statements and the notes to those statements beginning on page F-1 of this report, and the section 
entitled “Management’s Discussion and Analysis of Financial Condition and Results of Operations” 
included elsewhere in this report. The consolidated statements of operations data for the years ended 
December 31, 2007, 2006 and 2005 and the consolidated balance sheet data at December 31, 2007 and 
2006 are derived from, and are qualified in their entirety by reference to, the consolidated audited 
financial statements beginning on page F-1 of this report. The consolidated statements of operations data 
from January 30, 2003 (inception) to December 31, 2003 and the consolidated balance sheet data at 
December 31, 2003 are derived from, and qualified in their entirety by reference to, the consolidated 
audited financial statements of Pacific Ethanol. The historical results that appear below are not 
necessarily indicative of results to be expected for any future periods.  

Years Ended December 31, 

2007 

2006 

2005 

2004 

2003 

(in thousands, except per share data) 

Consolidated Statements of Operations Data: 
Net sales ..................................................................................
461,513 
Cost of goods sold ................................................................428,614 
Gross profit ................................................................
32,899 
Selling, general and administrative expenses ..........................30,822 
Income (loss) from operations ................................................2,077 
Other income (expense), net ...................................................(6,801) 
Income (loss) before provision for income taxes 

$ 

and noncontrolling interest in variable interest 
entity ..................................................................................(4,724) 
Provision for income taxes......................................................   
Income (loss) before noncontrolling interest in 

variable interest entity .......................................................(4,724) 
Noncontrolling interest in variable interest entity ...................(9,676)  
(14,400) 
Net loss ...................................................................................

$ 

Preferred stock dividends ........................................................
Deemed dividend on preferred stock ................................
$ 
Loss available to common stockholders ................................
Loss per share, basic and diluted ................................$ 
Weighted-average shares outstanding, basic and 

 (4,200) 
(28) 
(18,628) 
(0.47) 

$ 

diluted ................................................................................

39,895 

Consolidated Balance Sheet Data: 
$ 
Cash and cash equivalents ......................................................
Working capital (deficit) .........................................................
$ 
Total assets ................................................................$ 
$ 
Long-term debt ................................................................
$ 
Stockholders’ equity ...............................................................

5,707 
(37,886) 
651,600 
151,188 
282,286 

$ 

$ 

$ 

$ 
$ 

$ 
$ 
$ 
$ 
$ 

226,356 
201,527 
24,829 
24,641 
188 
3,426 

3,614 
  

3,614  
(3,756) 
(142) 

$ 

$ 

$ 

 (2,998) 
(84,000) 
(87,140) 

$ 
(2.50)   $ 

87,599 
84,444 
3,155 
12,638 
(9,483) 
(440) 

(9,923) 
  

(9,923) 
  
(9,923) 

$ 

$ 

$ 

  
  
(9,923) 
$ 
(0.40)    $ 

20 
13 
7 
2,277 
(2,270) 
(532) 

(2,802) 
  

(2,802)  
  
(2,802) 

  
  
(2,802) 
(0.23) 

34,855 

25,066 

12,397 

44,053 
96,094 
453,820 
28,970 
298,445 

$ 
$ 
$ 
$ 
$ 

4,521 
(2,894) 
48,185 
1,995 
28,516 

$ 
$ 
$ 
$ 
$ 

  
(1,025) 
7,179 
4,013 
1,356 

$ 

$ 

$ 
$ 

$ 
$ 
$ 
$ 
$ 

1,017 
946 
71 
648  
(577) 
(282) 

(859) 
  

(859) 
  
$(859) 

  
  
(859) 
(0.07) 

11,733 

249 
(358) 
6,560 
  
1,368 

No cash dividends on our common stock were declared during any of the periods presented 
above.  Various factors materially affect the comparability of the information presented in the above 
table. These factors relate primarily to a Share Exchange Transaction that was consummated on 
March 23, 2005 with the shareholders of PEI California, and the holders of the membership interests of 
each of Kinergy and ReEnergy, pursuant to which we acquired all of the issued and outstanding capital 
stock of PEI California and all of the outstanding membership interests of Kinergy and ReEnergy. See 
“Business—Company History.” In addition, we acquired a minority interest in Front Range on October 
17, 2006, at which date we began treating Front Range, a variable interest entity, as a consolidated 
subsidiary, as we are considered the primary beneficiary. 

-29- 

 
 
 
 
 
 
 
  
  
  
 
 
 
 
 
 
  
  
  
 
 
  
 
 
 
 
 
Item 7.  Management’s Discussion and Analysis of Financial Condition and Results of Operations. 

The following discussion and analysis should be read in conjunction with our consolidated 
financial statements and notes to consolidated financial statements included elsewhere in this report. This 
report and our consolidated financial statements and notes to consolidated financial statements contain 
forward-looking statements, which generally include the plans and objectives of management for future 
operations, including plans and objectives relating to our future economic performance and our current 
beliefs regarding revenues we might generate and profits we might earn if we are successful in 
implementing our business and growth strategies. The forward-looking statements and associated risks 
may include, relate to or be qualified by other important factors, including, without limitation: 

• 
• 

fluctuations in the market price of ethanol and its co-products;  
the projected growth or contraction in the ethanol and co-product market in which we 
operate;  

•  our strategies for expanding, maintaining or contracting our presence in these markets;  
•  our ability to successfully develop, finance, construct and operate our planned ethanol 

production facilities;  
• 
anticipated trends in our financial condition and results of operations; and  
•  our ability to distinguish ourselves from our current and future competitors.  

We do not undertake to update, revise or correct any forward-looking statements, except as 

required by law.  

Any of the factors described immediately above or in the “Risk Factors” section above could 
cause our financial results, including our net income or loss or growth in net income or loss to differ 
materially from prior results, which in turn could, among other things, cause the price of our common 
stock to fluctuate substantially. 

Overview 

Our primary goal is to be the leading marketer and producer of low carbon renewable fuels in the 

Western United States.  

We produce and sell ethanol and its co-products and provide transportation, storage and delivery 

of ethanol through third-party service providers in the Western United States, primarily in California, 
Nevada, Arizona, Oregon, Colorado and Idaho. We have extensive customer relationships throughout the 
Western United States and extensive supplier relationships throughout the Western and Midwestern 
United States. 

We own and operate two ethanol production facilities located in Madera, California and 
Boardman, Oregon. Our Madera facility has an annual production capacity of up to 40 million gallons and 
has been in operation since October 2006. Our Boardman facility has an annual production capacity of up 
to 40 million gallons and has been in operation since September 2007. In addition, we own a 42% interest 
in Front Range Energy, LLC, or Front Range, which owns and operates an ethanol production facility 
with annual production capacity of up to 50 million gallons in Windsor, Colorado. We have two 
additional ethanol production facilities under construction, in Burley, Idaho and Stockton, California, 
which are expected to commence operations in the second and third quarters of 2008, respectively. We 
also intend to either construct or acquire additional ethanol production facilities as financial resources and 
business prospects make the construction or acquisition of these facilities advisable. See “Business—
Production Facilities.”  

-30- 

 
 
Total annual gasoline consumption in the United States is approximately 140 billion gallons. 

Total annual ethanol consumption represented less than 5% of this amount in 2007. We believe that the 
domestic ethanol industry has substantial potential for growth to initially reach what we estimate is an 
achievable level of at least 10% of the total annual gasoline consumption in the United States, or 
approximately 14 billion gallons of ethanol annually and thereafter up to 36 billion gallons of ethanol 
annually under the new national Renewable Fuel Standards, or RFS, by 2022. See “Business—
Governmental Regulation.”  

We intend to reach our goal to be the leading marketer and producer of low carbon renewable 

fuels in the Western United States in part by expanding our relationships with customers and third-party 
ethanol producers to market higher volumes of ethanol, by expanding our relationships with animal feed 
distributors and end users to build local markets for wet distillers grains, or WDG, the primary co-product 
of our ethanol production, and by expanding the market for ethanol by continuing to work with state 
governments to encourage the adoption of policies and standards that promote ethanol as a fuel additive 
and transportation fuel. In addition, we intend to expand our annual production capacity to 220 million 
gallons in 2008, upon completion of our facilities in Burley, Idaho and Stockton, California, and 420 
million gallons of annual production capacity in 2010, through new construction or acquisition of 
additional ethanol production facilities. We also intend to expand our distribution infrastructure by 
increasing our ability to provide transportation, storage and related logistical services to our customers 
throughout the Western United States. 

Financial Performance Summary 

Our net sales increased by $235.1 million, or 104%, to $461.5 million for the year ended 
December 31, 2007 from $226.4 million for the year ended December 31, 2006. Our net loss, however, 
increased by $14.3 million to $14.4 million for the year ended December 31, 2007 from $0.1 million for 
the year ended December 31, 2006.  

Factors that contributed to our results of operations for 2007 include: 

•  Net sales. The increase in our net sales in 2007 as compared to 2006 was primarily due to the 

following combination of factors: 

o  Higher sales volumes. Total volume of ethanol sold increased by 87% to 190.6 

million gallons in 2007 from 101.7 million gallons in 2006. The increase in sales 
volume is primarily due to a full year of ethanol production from our Madera and 
Front Range facilities, each of which accounted for less than three months of 
production in 2006. Sales also increased in 2007 from startup of production at our 
Boardman facility and additional supply purchased from third-party suppliers under 
our ethanol marketing agreements; and 

o  Lower ethanol prices. The increase in sales volume was partially offset by lower 

ethanol prices. Our average sales price of ethanol decreased 6% to $2.15 per gallon in 
2007 as compared to $2.28 per gallon in 2006. This decrease is, however, less than 
the 21% decline in the average Chicago Board of Trade, or CBOT, ethanol price to 
$1.98 per gallon in 2007 as compared to $2.52 per gallon in 2006. 

•  Lower gross profit margin. Our gross profit margin decreased to 7.1% for 2007 as compared 
to 11.0% for 2006. This decrease was primarily due to lower ethanol prices and higher corn 
prices. In addition, we had significant fixed-price contracts and held inventory balances 
during a period of declining ethanol prices, both of which reduced our margins. The average 

-31- 

 
price of corn, the main raw material for ethanol we produce, increased by 48% to $3.61 per 
bushel for 2007 from $2.44 per bushel for 2006. The average CBOT price for corn increased 
by 44% to $3.74 per bushel for 2007 from $2.60 per bushel for 2006. Also, gross profit 
margins from our sale of WDG and other co-products from our ethanol production declined 
due to the increase in corn prices.  

•  Selling, general and administrative expenses. Our selling, general and administrative expenses 
increased by $6.2 million to $30.8 million in 2007 as compared to $24.6 million in 2006 
primarily as a result of increases in administrative staff, amortization of intangible assets and 
full-year expenses related to our 42% ownership interest in Front Range. However, these 
expenses decreased to 6.6% of our net sales in 2007 as compared to 10.9% of our net sales in 
2006 due to the substantial growth in our net sales over those periods.  

•  Other income (expense). Our other expense increased by $10.2 million to $6.8 million in 2007 
from other income of $3.4 million in 2006. This increase is primarily due to an increase in 
interest expense and amortization of finance charges from our increase in debt. In addition, 
other expense increased due to mark-to-market charges in the amount of $5.4 million on 
future interest rate positions.  

Sales and Margins 

Over the past three years, our sales mix has shifted significantly from sales generated solely as a 

marketer of ethanol produced by third parties to now include sales generated as a producer of our own 
ethanol. Our cost structure also changed significantly, predominantly in 2007, as our Madera and Front 
Range facilities were in full production and our Boardman facility was in production for more than three 
months during the year. The shift in our sales mix greatly altered our dependency on certain market 
conditions from that based primarily on the market price of ethanol to now include the cost of corn, the 
principal input commodity for our production of ethanol. Accordingly, our profitability is now highly 
dependent on the market price of ethanol and the cost of corn.   

Average ethanol sales prices dropped significantly in 2007 as compared to 2006. Specifically, the 

average CBOT price of ethanol decreased by 21% in 2007 as compared to the average 2006 price. The 
decrease in the prevailing market price of ethanol was the primary cause of the decline in our average 
ethanol sales price. However, because of our combination of fixed- and index-priced ethanol sales 
contracts, we were able to diminish the decline in our average ethanol sales price to only 6% in 2007 as 
compared to our average 2006 price.  

Average corn prices increased significantly in 2007 as compared to 2006. Specifically, the 
average CBOT price of corn increased by 44% in 2007 as compared to the average 2006 price. The 
increase in the prevailing market price of corn was the primary cause of the increase in our average corn 
price. However, our average corn price increased by 48% in 2007 as compared to our average 2006 
price—a rate greater than the increase in the average CBOT price of corn—because we purchased more 
corn in the fourth quarter of 2007, a period during which corn prices were at their highest levels during 
the year, as compared to previous quarters in connection with the commencement of operations at our 
Boardman facility. 

We have three principal methods of selling ethanol: as a merchant, as a producer and as an agent. 

See “Critical Accounting Policies—Revenue Recognition” below.  

When acting as a merchant or as a producer, we generally enter into sales contracts to ship 
ethanol to a customer’s desired location. We support these sales contracts through purchase contracts with 

-32- 

 
several third-party suppliers or through our own production. We manage the necessary logistics to deliver 
ethanol to our customers either directly from a third-party supplier or from our inventory via truck or rail. 
Our sales as a merchant or as a producer expose us to price risks resulting from potential fluctuations in 
the market price of ethanol. Our exposure varies depending on the magnitude of our sales commitments 
compared to the magnitude of our purchase commitments and existing inventory, as well as the pricing 
terms—such as market index or fixed pricing—of our contracts. We seek to mitigate our exposure to 
price risks by implementing appropriate risk management strategies.  

When acting as an agent for third-party suppliers, we conduct back-to-back purchases and sales in 

which we match ethanol purchase and sale contracts of like quantities and delivery periods. When acting 
as an agent for third-party suppliers, we receive a predetermined service fee and we have little or no 
exposure to price risks resulting from potential fluctuations in the market price of ethanol.  

We believe that our gross profit margins will primarily depend on four key factors:  

• 

• 

the market price of ethanol, which we believe will be impacted by the degree of 
competition in the ethanol market, the price of gasoline and related petroleum products, 
and government regulation, including tax incentives;  

the market price of key production input commodities, including corn and natural gas;  

•  our ability to anticipate trends in the market price of ethanol, WDG, and key input 

commodities and implement appropriate risk management and opportunistic strategies; 
and  

• 

the proportion of our sales of ethanol produced at our facilities to our sales of ethanol 
produced by third-parties.  

We believe that our gross profit margins will also depend on the market price of WDG.  

Management seeks to optimize our gross profit margins by anticipating the factors above and 

implementing hedging transactions and taking other actions designed to limit risk and address the various 
factors. For example, we may seek to decrease inventory levels in anticipation of declining ethanol prices 
and increase inventory levels in anticipation of increasing ethanol prices. We may also seek to alter our 
proportion or timing, or both, of purchase and sales commitments.  

Our inability to anticipate the factors above or their relative importance, and adverse movements 

in the factors themselves, could result in declining or even negative gross profit margins over certain 
periods of time. Our ability to anticipate those factors or favorable movements in the factors themselves 
may enable us to generate above-average gross profit margins. However, given the difficulty associated 
with successfully forecasting any of these factors, we are unable to estimate our future gross profit 
margins.  

-33- 

 
Results of Operations 

The following selected financial data should be read in conjunction with our consolidated 
financial statements and notes to our consolidated financial statements included elsewhere in this report, 
and the other sections of “Management’s Discussion and Analysis of Financial Condition and Results of 
Operations” contained in this report. 

Certain performance metrics that we believe are important indicators of our results of operations 

include: 

Gallons sold (in millions) 

Average sales price per gallon  

Corn cost per bushel—CBOT equivalent(1) 
Co-product revenues as % of delivered cost of 

corn(2) 

Average CBOT ethanol price per gallon  
Average CBOT corn price per bushel  

2007 

190.6 

2.15 

3.61 

24.8% 

1.98 
3.74 

$ 

$ 

$ 
$ 

Years Ended 
December 31, 
2006 

2005 

52.3 

$ 

1.67 

N/A 

N/A 

101.7 

2.28 

2.44 

33.4% 

2.52 
2.60 

$ 
$ 

1.70 
1.77 

$ 

$ 

$ 
$ 

Percentage Variance 
From Prior Year 

2007 

87.4% 

(5.7)% 

48.0% 

(8.6)% 

(21.4)% 
43.9% 

2006 

94.4% 

36.5% 

N/A 

N/A 

48.2% 
46.9% 

_____________ 
(1)  We exclude transportation—or “basis”—costs in our corn costs to calculate a CBOT equivalent in order to more appropriately compare 

our corn costs to average CBOT corn prices.  

(2)  Co-product revenues as % of delivered cost of corn shows our yield based on sales of WDG generated from ethanol we produced.  

Year Ended December 31, 2007 Compared to the Year Ended December 31, 2006 

Years Ended 
December 31, 

2007 

2006 

Dollar  
Variance 
Favorable 

Percentage  
Variance 
Favorable 

(Unfavorable)  (Unfavorable) 
(dollars in thousands) 

Results as a Percentage 
of Net Sales for the 
Years Ended 
December 31, 

2007 

2006 

461,513  $ 

Net sales ................................................................$ 
Cost of goods sold ..................................................... 428,614 
Gross profit ................................................................ 32,899 
Selling, general and administrative expenses ............ 30,822 
2,077 
Income from operations  ............................................
(6,801) 
Other income (expense), net ................................
Income (loss) before provision for income 

226,356  $ 
201,527 
24,829 
24,641 
188 
3,426 

235,157 
(227,087) 
8,070 
(6,181) 
1,889 
(10,227) 

103.9% 
(112.7) 
32.5 
(25.1) 
1,004.8 
(298.5) 

taxes and noncontrolling interest in variable 
interest entity ..........................................................

Provision for income taxes  ................................
Noncontrolling interest in variable interest 

entity ................................................................
Net loss ................................................................$ 
Preferred stock dividends ..........................................
Deemed dividend on preferred stock .........................

(4,724) 
— 

3,614 
— 

(8,338) 
— 

(230.7) 
— 

(9,676) 
(14,400)  $ 
(4,200) 
(28) 

(3,756) 

(142)  $ 

(2,998) 
(84,000) 

(5,920) 
(14,258) 
(1,202) 
83,972 

(157.6) 
(10,040.9)% 
(40.1) 
100.0 

Loss available to common stockholders ....................

$ 

(18,628)  $ 

(87,140)  $ 

68,512 

78.6% 

100.0% 
92.9 
7.1 
6.6 
0.5 
(1.5) 

(1.0) 
— 

(2.1) 
(3.1)% 
(0.9) 
(0.0) 

(4.0)% 

100.0% 
89.0 
11.0 
10.9 
0.1 
1.5 

1.6 
— 

(1.7) 
(0.1)% 
(1.3) 
(37.1) 

(38.5)% 

Net Sales 

The increase in our net sales in 2007 as compared to 2006 was primarily due to a substantial 

increase in sales volume, which was partially offset by decreased average sales prices.  

-34- 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Total volume of ethanol sold increased by 88.9 million gallons, or 87%, to 190.6 million gallons 

in 2007 as compared to 101.7 million gallons in 2006. The substantial increase in sales volume is 
primarily due to a full year of ethanol production at our Madera and Front Range facilities in 2007. Our 
Madera and Front Range facilities each accounted for less than three months of ethanol production in 
2006. In addition, in 2007, we commenced ethanol production at our Boardman facility and also 
generated increased sales from the purchase and resale of additional supply from third-parties under our 
ethanol marketing agreements. The production and sale of ethanol and its co-products from our Madera 
and Boardman facilities, and through Front Range, contributed an aggregate of $194.0 million to our 
increase in net sales in 2007. 

Our average sales price per gallon declined 6% to $2.15 in 2007 from an average sales price per 

gallon of $2.28 in 2006. The average CBOT price per gallon declined 21% to $1.98 in 2007 from an 
average CBOT price per gallon of $2.52 in 2006. We believe that we were insulated from some of this 
decline due to our fixed-price ethanol contracts which were partially offset by derivative losses incurred 
as a result of locking in margins.  

Cost of Goods Sold and Gross Profit 

The increase in our cost of goods sold in 2007 as compared to 2006 was predominantly due to 

increased sales volume and increased corn costs which contributed to higher costs per gallon. Our gross 
margin declined to 7.1% in 2007 from 11.0% in 2006 primarily due to increased corn costs, lower average 
sales prices per gallon and losses on derivatives, as further discussed below.  

Although a large proportion of our sales volume results from the marketing and sale of ethanol 

produced by third parties, production of our own ethanol is growing rapidly and we expect that our 
production will continue to grow as new facilities commence operations. Our purchase and sale prices of 
ethanol produced by third parties typically fluctuate closely with market prices. As a result, our average 
cost of ethanol purchased from third parties decreased in line with the overall decline in our average sales 
price per gallon.  

Corn is the single largest component of the cost of our ethanol production. Average corn prices 

rose significantly in 2007 as compared to 2006, with greater increases occurring in the second half of 
2007 than in the first half of the year. These increases pushed our average corn price higher than the 
average market price for all of 2007 because our corn requirements increased significantly during the 
second half of 2007 due to the commencement of operations at our Boardman facility in September 2007. 
Overall, the price of corn had a much larger impact on our production costs per gallon in 2007 than in 
2006 due to the higher proportion of sales from production of our own ethanol in 2007 as compared to 
2006.  

Cost of goods sold also increased by $4,122,000 from net losses on derivatives in 2007 as 

compared to only a nominal amount in 2006. These losses resulted from derivatives that we entered in 
order to lock in margins during the year and were partially offset by gains from derivatives we entered in 
order to lock in the price of corn. Of these losses, $1,649,000 was related to open positions at December 
31, 2007.  

Selling, General and Administrative Expenses 

Our selling, general and administrative expenses, or SG&A, increased by $6,181,000 to 
$30,822,000 for 2007 as compared to $24,641,000 for 2006. SG&A, however, decreased as a percentage 
of net sales due to our significant sales growth. The increase in the dollar amount of SG&A is primarily 
due to the following factors: 

-35- 

 
•  payroll and benefits increased by $3,017,000, or 68%, due to increased administrative 

staff;  

• 

amortization of intangible assets resulting from our acquisition of our 42% ownership 
interest in Front Range increased by $2,117,000, as we incurred a full year of 
amortization compared to less than three months in 2006; we expect these costs to decline 
to approximately $500,000 for each of the next seven years;  

•  SG&A attributable to Front Range increased by $2,042,000 as we incurred a full year of 

these expenses as compared to less than three months in 2006; 

• 

• 

• 

• 

consulting and temporary staff expenses increased by $1,950,000, or 126%, due to the 
retention of additional consulting and temporary staff personnel to assist us in meeting 
our accounting and public reporting requirements, including as we transitioned our 
permanent staff to our new corporate headquarters in Sacramento, California; these 
consulting and temporary staff personnel also assisted us in training new administrative 
staff members; 

recruiting, hiring and training expenses increased by $709,000, or 1,055%, employee 
travel and office setup costs increased by $377,000, or 243%, and rent expense increased 
by $457,000, or 221%; each of these increases resulted primarily from the relocation of 
our corporate headquarters in early 2007 from Fresno to Sacramento; 

external audit costs increased by $582,000, or 312%, due to our overall growth and 
business initiatives; and 

travel-related costs increased by $311,000, or 52%, due to expanded operations and new 
office locations. 

Partially offsetting the foregoing increases were the following decreases: 

•  non-cash compensation expense decreased by $4,023,000, or 64%, due to the completion 

of vesting of incentive compensation paid to employees and consultants;  

• 

• 

legal expenses decreased by $918,000, or 43%, primarily due to one-time costs 
associated with greater legal activity from litigation and business transactions that 
occurred in 2006; and 

costs associated with implementing and testing our internal controls and related 
compliance required under the Sarbanes-Oxley Act of 2002 decreased by $902,000, or 
76%, as many costs that occurred in 2006 were related predominantly to our initial 
implementation and testing of our internal controls. 

Other Income (Expense), Net 

Other expense increased by $10,227,000 to $6,801,000 in 2007 from other income of $3,426,000 

in 2006. The increase in other expense is primarily due to the following factors: 

• 

interest expense increased by $1,828,000, or 286%, due to additional borrowings and a 
full year of interest accruing on outstanding debt; and 

-36- 

 
• 

amortization of interest and financing costs increased by $3,164,000, or 305%, primarily 
due to an amendment to our construction financing credit facility that reduced its 
application from five to four facilities and reduced the total amount of available financing; 
as a result, we wrote off $1,962,000 of unamortized costs associated with our Imperial 
Valley facility, the construction of which  has been suspended; interest and financing costs 
incurred under the construction phase of each of our facilities are being capitalized until 
the corresponding facility becomes operational; this increase in amortization of interest 
and financing costs is net of approximately $7,823,000 of additional capitalized amounts 
over 2006. 

In addition, we recognized losses of $119,000 and $5,442,000 of effective and ineffectiveness 

positions, respectively, from our interest rate hedges which required that we mark-to-market our 
ineffective positions in a declining interest rate environment. The ineffectiveness related to our interest 
rate swaps and primarily resulted from the suspension of construction of our Imperial Valley facility. 

Noncontrolling Interest in Variable Interest Entity 

Noncontrolling interest in variable interest entity relates to the consolidated treatment of Front 
Range, a variable interest entity, and represents the noncontrolling interest of others in the earnings of 
Front Range. We consolidate the entire income statement of Front Range for the period covered. 
However, because we own only 42% of Front Range, we must reduce our net income or increase our net 
loss for the noncontrolling interest, which is the 58% ownership interest that we do not own. This amount 
increased by $5,920,000 to $9,676,000 in 2007 from $3,756,000 in 2006 due to the consolidation of Front 
Range’s operations for all of 2007 as compared to less than three months in 2006. 

Preferred Stock Dividends 

Shares of our Series A Cumulative Redeemable Convertible Preferred Stock, or Series A Preferred 

Stock, are entitled to quarterly cumulative dividends payable in arrears in cash in an amount equal to 5% 
per annum of the purchase price per share of the Series A Preferred Stock, or, at our option, payable in 
additional shares of Series A Preferred Stock based on the value of the purchase price per share of the 
Series A Preferred Stock. In 2007, we declared and paid dividends on our Series A Preferred Stock in the 
aggregate amount of $4,200,000 comprised of cash dividends in the aggregate amount of $3,150,000 for 
the first three quarters and a dividend payment-in-kind in the amount of $1,050,000 that was issued in 
shares of Series A Preferred Stock for the fourth quarter. 

Deemed Dividend on Preferred Stock 

We recorded a deemed dividend on preferred stock of $28,000 for 2007 in connection with our 
issuance of shares of Series A Preferred Stock as a dividend payment-in-kind for the fourth quarter. We 
also recorded a deemed dividend on preferred stock of $84,000,000 for 2006 in connection with our initial 
issuance of shares of Series A Preferred Stock. These non-cash dividends reflect the implied economic 
value to the preferred stockholder of being able to convert these additional shares into common stock at 
prices which were in excess of the fair value of the Series A Preferred Stock at the times of issuance. The 
fair value was calculated using the difference between the agreed-upon conversion price of the Series A 
Preferred Stock into shares of common stock of $8.00 per share and the fair market value of our common 
stock of $8.21 and $29.27 on the date of issuance of the additional shares of Series A Preferred Stock for 
2007 and 2006, respectively. The fair value allocated to the initial issuance of the Series A Preferred 
Stock in 2006 was in excess of the gross proceeds received of $84,000,000 in connection with the initial 
sale of the Series A Preferred Stock; however, the deemed dividend on the Series A Preferred Stock for 
2006 is limited to the gross proceeds received of $84,000,000. The deemed dividend on preferred stock is 

-37- 

 
a reconciling item and adjusts our reported net loss, together with the preferred stock dividends discussed 
above, to loss available to common stockholders. 

Year Ended December 31, 2006 Compared to the Year Ended December 31, 2005 

Years Ended 
December 31, 

2006 

2005 

Dollar  
Variance 
Favorable 

Percentage  
Variance 
Favorable 

(Unfavorable)  (Unfavorable) 
(dollars in thousands) 

Results as a Percentage 
of Net Sales for the 
Years Ended 
December 31, 

2006 

2005 

226,356  $ 

Net sales ................................................................$ 
Cost of goods sold ..................................................... 201,527 
Gross profit ................................................................ 24,829 
Selling, general and administrative expenses ............ 24,641 
188 
Income (loss) from operations  ................................
3,426 
Other income (expense), net ................................
Income (loss) before provision for income 

87,599  $ 
84,444 
3,155 
12,638 
(9,483) 
(440) 

138,757 
(117,083) 
21,674 
(12,003) 
9,671 
3,866 

158.4% 
(138.7) 
687.0 
(95.0) 
102.0 
878.6 

taxes and noncontrolling interest in variable 
interest entity ..........................................................

Provision for income taxes  ................................
Noncontrolling interest in variable interest 

3,614 
— 

(9,923) 
— 

13,537 
— 

136.4 
— 

entity ................................................................
Net loss ................................................................$ 
Preferred stock dividends ..........................................
(2,998) 
Deemed dividend on preferred stock ......................... (84,000) 

(3,756) 

(142)  $ 

— 
(9,923)  $ 
— 
— 

(3,756) 
9,781 
(2,998) 
(84,000) 

(100.0) 
98.6% 
(100.0) 
(100.0) 

100.0% 
89.0 
11.0 
10.9 
0.1 
1.5 

1.6 
— 

(1.7) 
(0.1)% 
(1.3) 
(37.1) 

100.0% 
96.4 
3.6 
14.4 
(10.8) 
(0.5) 

(11.3) 
— 

— 
(11.3)% 
— 
— 

Loss available to common stockholders ....................

$ 

(87,140)  $ 

(9,923)  $ 

(77,217) 

(778.2)% 

(38.5)% 

(11.3)% 

Net Sales 

The increase in our net sales in 2006 as compared to 2005 was predominantly due to increased 

sales volume and increased average sales prices. During 2006, total volume of ethanol sold increased by 
49.4 million gallons, or 94%, to 101.7 million gallons as compared to 52.3 million gallons for 2005. For 
2006, our average sales price of ethanol increased by $0.61 per gallon, or 37%, to $2.28 per gallon for as 
compared to $1.67 per gallon for 2005. The substantial increase in sales volume is primarily due to 
additional supply provided under our ethanol marketing agreements and the commencement of ethanol 
production. In the fourth quarter of 2006, we commenced producing ethanol and its co-products at our 
Madera facility and, based on our ownership interest in Front Range, began recording a proportionate 
amount of its net sales. The production and sale of ethanol and its co-products at our Madera facility and 
through Front Range contributed an aggregate of $28,064,000 in sales for 2006.  

Cost of Goods Sold and Gross Profit 

The increase in our cost of goods sold in 2006 as compared to 2005 was predominantly due to 
increased sales volume. The increase in gross profit, both in dollars and as a percentage of net sales, in 
2006 as compared to 2005 is generally reflective of more advantageous buying and selling during a period 
of increasing market prices as well as the commencement of ethanol production at our Madera facility and 
our acquisition of a 42% interest in Front Range, both of which occurred in the fourth quarter of 2006. 
We established and maintained net long ethanol positions during much of 2006. The decision to maintain 
net long ethanol positions was reached in accordance with our risk management program and was based 
on a confluence of factors, including management’s expectation of increased prices of gasoline and 
petroleum and the continued phase-out of methyl tertiary-butyl ether, or MTBE, blending which we 
believed would result in a significant increase in demand for blending ethanol with gasoline. Future gross 

-38- 

 
 
 
 
profit margins will vary based upon, among other things, the size and timing of our net long or short 
positions during our various contract periods and the volatility of the market price of ethanol.  

Selling, General and Administrative Expenses 

The increase in SG&A during 2006 as compared to 2005 was primarily due to a $5,613,000 

increase in payroll and benefits related to the hiring of additional staff, a $2,759,000 increase in legal, 
accounting and consulting fees, a $1,671,000 increase in additional non-cash director and consulting 
expenses, a $1,200,000 increase in depreciation and amortization, a $769,000 increase in insurance 
expense primarily related to increased directors and officers insurance costs, a $626,000 increase in 
general office and administrative expenses, a $619,000 increase in costs related to implementation and 
testing of internal controls and procedures in connection with the Sarbanes-Oxley Act of 2002, a 
$452,000 increase in travel and entertainment and a $250,000 increase in investor relations expense. 

Other Income (Expense), Net 

Other income increased during 2006 as compared to 2005, primarily due to a $4,332,000 increase 
in interest income associated with the significant increase in our cash position due to the sale of shares of 
our common stock in May 2006 and shares of our Series A Preferred Stock in April 2006, $1,110,000 in 
deferred financing cost amortization related to potential plant expansion financing and $494,000 in 
interest expense related to notes payable. Other changes included a $373,000 increase in capitalized 
interest related to a loan for the construction of our Madera production facility, a $297,000 decrease in 
penalties and fines expenses and a $350,000 increase in all other categories. 

Noncontrolling Interest in Variable Interest Entity 

Noncontrolling  interest  in  variable  interest  entity  was  $3,756,000.  As  noted  above,  this  amount 
relates  to  the  consolidated  treatment  of  Front  Range,  a  variable  interest  entity  and  represents  the 
noncontrolling interest of others in the earnings of Front Range. 

Preferred Stock Dividends 

As noted above, shares of our Series A Preferred Stock are entitled to quarterly cumulative 
dividends. In 2006, we declared and paid cash dividends on shares of our Series A Preferred Stock in the 
aggregate amount of $2,998,000. 

Deemed Dividend on Preferred Stock 

We recorded a deemed dividend on preferred stock of $84,000,000 for 2006 in connection with 

our initial issuance of shares of Series A Preferred Stock. This non-cash dividend reflects the implied 
economic value to the preferred stockholder of being able to convert the shares into common stock at a 
price which was in excess of the fair value of the Series A Preferred Stock at the time of issuance. The 
fair value was calculated using the difference between the agreed-upon conversion price of the Series A 
Preferred Stock into shares of common stock of $8.00 per share and the fair market value of our common 
stock of $29.27 on the date of issuance of the shares of Series A Preferred Stock. The fair value allocated 
to the issuance of the Series A Preferred Stock was in excess of the gross proceeds received of 
$84,000,000 in connection with the sale of the Series A Preferred Stock; however, the deemed dividend 
on the Series A Preferred Stock for 2006 is limited to the gross proceeds received of $84,000,000. The 
deemed dividend on preferred stock is a reconciling item and adjusts our reported net loss, together with 
the preferred stock dividends discussed above, to loss available to common stockholders. 

-39- 

 
Liquidity and Capital Resources 

Overview 

During 2007, we funded our operations primarily from our cash on hand, borrowings on our 

credit facilities and other loans. In the first half of 2007, we obtained financing for our first five ethanol 
production facilities and received the first draw under this credit facility in the amount of $76.6 million 
for our Madera facility. We also received approximately $24.9 million in the first half of 2007, which 
represented the remaining balance in a restricted cash account from our April 2006 sale of our Series A 
Preferred Stock. These proceeds were used to fund the continued construction of four ethanol production 
facilities.  

In the second half of 2007, we received the second draw under our credit facility in the amount of 
$50.4 million for our Boardman facility. In the second half of 2007, we also settled certain cost-overruns 
at our Boardman facility through the issuance of a $6.0 million note due in December 2008. Also in the 
second half of 2007, after evaluating the overall ethanol market and our production capacity and cost 
structure, we decided to suspend construction of our Imperial Valley facility near Calipatria, California. 
At the time of this decision, we owed approximately $30.0 million for work already performed on the 
project. We borrowed $30.0 million in the fourth quarter of 2007 to help cover these and other costs. See 
“—Current and Prospective Capital Needs” and “—Notes Payable” below. 

Sale of Series B Preferred Stock 

On March 27, 2008, we issued to Lyles United, LLC, 2,051,282 shares of our Series B Preferred 

Stock and a ten-year warrant to purchase an aggregate of 3,076,923 shares of our common stock at an 
exercise price of $7.00 per share for an aggregate purchase price of $40.0 million. Each share of Series B 
Preferred Stock is initially convertible into three shares of our common stock. We intend to use the 
proceeds from the sale of our Series B Preferred Stock for general working capital purposes and to further 
fund the construction of our Burley and Stockton ethanol production facilities. 

Current and Prospective Capital Needs 

We believe that current and future capital resources, revenues generated from operations and 

other existing sources of liquidity, including available proceeds from our existing debt financing, will be 
adequate to fund our operations through 2008 and meet our capital expenditure requirements to reach our 
goal of 220 million gallons of annual production capacity in 2008 upon completion of our Burley and 
Stockton facilities.  We will require substantial additional financing to reach our goal of 420 million 
gallons of annual production capacity in 2010 and we plan to reach this goal through new construction or 
acquisition of additional ethanol production facilities.  If ethanol production margins deteriorate from 
current levels, if we experience additional cost overruns at our ethanol production facilities under 
construction, if our capital requirements or cash flows otherwise vary materially and adversely from our 
current projections, or if other adverse unforeseen circumstances occur, our working capital may be 
inadequate to fully fund our operations or meet our capital expenditure requirements, or both. We are 
presently exploring potential sources of new financing to provide additional working capital.  Our failure 
to raise capital if or when needed may have a material adverse effect on our results of operations, liquidity 
and cash flows and may restrict our growth and hinder our ability to compete.   

We have recently raised $30.0 million in debt financing from Lyles United, LLC and $40.0 

million through the sale of our Series B Preferred Stock and a warrant to Lyles United, LLC.  Our need 
for this additional capital was due to numerous factors that arose or that we identified in the fourth quarter 
of 2007.  We experienced higher than forecast construction costs at our Burley and Stockton facilities as a 

-40- 

 
result of unanticipated change orders.  We also incurred higher costs related to the completion of “punch 
list” items at our Boardman facility and costs related to the suspension of construction of our Imperial 
Valley facility.  In aggregate, these cost overruns that arose or that were identified in the fourth quarter of 
2007 were approximately $27.0 million.  In addition, funding under our construction loan facility will 
occur later than previously anticipated.  Consequently, we expect to fund approximately $29.0 million for 
the ongoing construction of our Burley and Stockton facilities.  We expect a significant portion of the 
$29.0 million to be recovered upon completion of our Burley and Stockton facilities, at which time we 
expect to draw additional loan proceeds under the terms of our existing construction loan facility.  In 
addition to the above factors, we also continued to experience adverse ethanol market conditions during 
the fourth quarter of 2007.  The effects of lower than expected commodity margins—the difference 
between the selling price of ethanol and the cost of corn—caused our cash generated from operations to 
be lower than forecast. 

Quantitative Year-End Liquidity Status 

We believe that the following amounts provide insight into our liquidity and capital resources. 

The following selected financial data should be read in conjunction with our consolidated financial 
statements and notes to consolidated financial statements included elsewhere in this report, and the other 
sections of “Management’s Discussion and Analysis of Financial Condition and Results of Operations” 
contained in this report (dollars in thousands): 

As of and for the Year Ended 
December 31, 
2006 

December 31, 
2007 

Current assets ................................................................
Current liabilities ..........................................................
Property and equipment, net .........................................
Notes payable, net of current portion ............................
Cash provided by (used in) operating activities ............
Working capital ............................................................
Working capital ratio ....................................................

$ 
$ 
$ 
$ 
$ 
$ 

82,193 
120,079 
468,704 
151,188 
16,718 
(37,886) 
0.68 

$ 
$ 
$ 
$ 
$ 
$ 

127,045 
30,951 
196,156 
28,970 
(8,144) 
96,094 
4.10 

Change in Working Capital and Cash Flows 

Variance 

(35.3)% 
288.0% 
138.9% 
421.9% 
305.3% 
(139.4)% 
(83.4)% 

Working capital decreased to a deficit of $37,886,000 at December 31, 2007 from working 
capital of $96,094,000 at December 31, 2006 as a result of a decrease in current assets of $44,852,000 and 
an increase in current liabilities of $89,128,000.  

Current assets decreased primarily due to net decreases in cash and cash equivalents and 
investments in marketable securities of $38,346,000 and $19,766,000, respectively, the proceeds of which 
were predominantly used for costs associated with the construction of ethanol production facilities, and a 
decrease in accounts receivable of $1,288,000, which were partially offset by an increase in inventory of 
$10,945,000, primarily resulting from an increase in ethanol held in inventory, and an increase in all other 
current assets of $3,120,000. 

Current liabilities increased primarily due to an increase in construction-related accounts payable 
and accrued liabilities of $52,172,000, an increase in trade accounts payable of $13,683,000, an increase 
in current portion of long-term notes payable of $6,973,000, a short-term note payable of $6,000,000, an 
increase in contract retentions of $5,001,000, an increase in derivative liabilities of $10,256,000, an 
increase in accrued liabilities of $2,440,000 and an increase in all other liabilities of $1,125,000, which 
were partially offset by a net decrease in other liabilities – related parties of $8,522,000.  

-41- 

 
 
 
 
 
  
  
  
  
  
  
 
  
  
The decrease in working capital was primarily due to construction activity during the year, 

requiring the use of our cash and investments in marketable securities balances and increased 
construction-related accounts payable and accrued expenses. The decrease in working capital was also 
due in part to increased short- and long-term financing, which increased the current portion of our debt. 

Cash provided by our operating activities of $16,718,000 resulted primarily from an increase in 
accounts payable and accrued expenses of $10,332,000, depreciation and amortization of intangibles of 
$17,513,000, non-controlling interest in our variable interest entity of $9,676,000, derivative losses of 
$6,617,000, amortization of deferred financing fees of $4,726,000, non-cash compensation and consulting 
expense of $2,225,000 and a decrease in accounts receivable of $1,230,000, which were partially offset 
by an increase in inventories of $10,945,000 and other liabilities – related parties of $8,524,000.  

Cash used in our investing activities of $166,214,000 resulted from purchases of additional 
property and equipment of $210,482,000 which were partially offset by a decrease in restricted cash 
designated for construction of $24,851,000 and proceeds from sales of marketable securities of 
$19,417,000. 

Cash provided by our financing activities of $111,150,000 resulted primarily from proceeds from 

our debt financing and lines of credit of $137,725,000 and proceeds from the exercise of warrants and 
stock options of $2,257,000, which were partially offset by cash paid for debt issuance costs of 
$10,261,000, principal payments paid on borrowings of $8,678,000 and preferred stock dividends paid of 
$4,200,000. 

Changes in Other Assets and Liabilities 

Property and equipment, net, increased to $468,704,000 at December 31, 2007 from 

$196,156,000 at December 31, 2006 primarily as a result of the construction of ethanol plants. 

Restricted cash decreased to $0 at December 31, 2007 from $24,851,000 at December 31, 2006. 

We received approximately $24,851,000 in the first half of 2007, which represented the remaining 
balance in a restricted cash account from our April 2006 sale of our Series A Preferred Stock. 

Notes  payable,  net  of  current  portion,  increased  to  $151,188,000  at  December  31,  2007  from 
$28,970,000 at December 31, 2006 primarily as a result of loan proceeds used for construction activities 
at our ethanol plants under construction. The proceeds from these notes payable were primarily from our 
debt financing arrangement described below. 

Debt Financing 

On February 27, 2007, we closed a debt financing transaction in the aggregate amount of up to 
$325,000,000 through certain of our indirectly wholly-owned subsidiaries. The primary purpose of the 
debt financing was to provide debt financing for the development, construction, installation, engineering, 
procurement, design, testing, start-up, operation and maintenance of five ethanol production facilities. On 
November 27, 2007, we amended the related credit agreement to apply to four ethanol production 
facilities, thereby reducing the aggregate amount of available financing to up to $250,769,000. As of 
December 31, 2007, two of the four plants had been funded, with the remaining two expected to be 
funded in 2008. As of that date, the outstanding balance under the debt financing was $101,508,000, 
comprised of $92,308,000 in construction loans and $9,200,000 in used lines of credit.  

Debt financing proceeds are subject to customary conditions precedent, including, among others, 

the absence of a material adverse effect; the absence of defaults or events of defaults, which include the 

-42- 

 
existence of any material weakness in our internal control over financial reporting; the accuracy of certain 
representations and warranties; the maintenance of a debt-to-equity ratio that is not in excess of 65:35; the 
contribution of all required equity by us to the Borrowers, which is expected to be approximately 
$227,000,000 in the aggregate; and the attainment of at least a 1.5-to-1.0 debt service coverage ratio. 
Also, the Borrowers may not be able to fully utilize the debt financing if the completed ethanol plants fail 
to meet certain minimum performance standards or if the corresponding ethanol plants are not timely 
completed. Borrowings and the borrowers’ obligations under the debt financing are secured by a first-
priority security interest in all of our equity interests in the borrowers and substantially all the assets of the 
borrowers. The security interests granted by the borrowers under the debt financing restrict the assets and 
revenues of the borrowers and therefore may inhibit our ability to obtain other debt financing.  

In March 2008, we became aware of various events or circumstances which constituted defaults 

under our Credit Agreement. These events or circumstances included the existence of material 
weaknesses in our internal control over financial reporting as of December 31, 2007, cash management 
activities that violated covenants in our Credit Agreement, failure to maintain adequate amounts in a 
designated debt service reserve account, the existence of a number of Eurodollar loans in excess of the 
maximum number permitted under our Credit Agreement, and our failure to pay all remaining project 
costs on our Madera and Boardman facilities by certain stipulated deadlines. On March 26, 2008, we 
obtained waivers from our lenders as to these defaults and were required to pay the lenders a consent fee 
in an aggregate amount of up to approximately $600,000. In addition to the waivers, our lenders agreed to 
amend the Credit Agreement. These amendments include an increase in the frequency with which we are 
to deposit certain revenues into a restricted account each month, an increase the allowable Eurodollar 
loans from a maximum of seven to a maximum of ten, and we are required to pay all remaining project 
costs on our Madera and Boardman facilities by May 16, 2008.  

Line of Credit 

In addition to the above debt financing, in August 2007, we secured a working capital credit 

facility in the amount of up to $25,000,000 which expires in July 2009. As of December 31, 2007, we had 
$6,217,000 outstanding under this credit facility under two separate variable interest rates of 6.19% and 
6.75%.  

Notes Payable 

In November and December 2007, one of our subsidiaries borrowed an aggregate of $30,000,000 

in two separate loans of $15,000,000 each. The loans accrue interest at a rate equal to the Prime Rate of 
interest as reported from time to time in The Wall Street Journal, plus 2.00%. The November 2007 is due 
February 25, 2009. The December 2007 loan is due on March 31, 2008 or, if extended at our discretion, 
on March 31, 2009. We intend to extend the due date of the December 2007 loan. Both loans are secured 
by substantially all of our subsidiary’s assets. In addition, we have executed a corporate guaranty that 
guarantees the repayment of the loans. 

Contractual Obligations 

The  following  table  outlines  payments  due  under  our  significant  contractual  obligations  (in 

thousands):  

-43- 

 
Contractual Obligations 
2008 
At December 31, 2007 
Sourcing commitments(1) ................................
$  76,780 
13,637 
Debt principal ................................ 
14,787 
Debt interest................................ 
Operating leases(2)................................
2,247 
Firm capital commitments(3) ................................
  118,357 
Preferred dividends(4) ................................
4,253 

2009 
$  — 
53,465 
13,898 
2,434 
— 
4,253 

2010 
$  — 
7,260 
9,416 
2,425 
— 
4,253 

2011 
$  — 
17,546 
8,749 
2,267 
— 
4,253 

2012 
$  — 
5,661 
7,243 
1,965 
— 
4,253 

Thereafter 
$ 
  70,717 
  18,396 
  10,282 
— 
4,253 

Total 
—  $  76,780 
168,286 
     72,489 
21,620 
118,357 
25,518 

Total commitments ................................

$  230,061 

$ 74,050 

$  23,354 

$  32,815 

$ 19,122 

$ 103,648  $ 483,050 

__________ 
(1)  Unconditional purchase commitments for production materials incurred in the normal course of business. 
(2) 
(3)  Construction commitments for in-progress and contracted ethanol processing facilities  
(4)  Represents dividends on 5,315,625 shares of Series A Preferred Stock. 

Future minimum payments under non cancelable operating leases. 

The above table outlines our obligations as of December 31, 2007 and does not reflect the 

changes in our obligations that occurred after that date. 

Critical Accounting Policies 

Our discussion and analysis of our financial condition and results of operations are based upon 

our consolidated financial statements, which have been prepared in accordance with accounting principles 
generally accepted in the United States of America. The preparation of these financial statements requires 
us to make estimates and judgments that affect the reported amounts of assets and liabilities and 
disclosure of contingent assets and liabilities at the date of the financial statements and the reported 
amount of net sales and expenses for each period. The following represents a summary of our critical 
accounting policies, defined as those policies that we believe are the most important to the portrayal of 
our financial condition and results of operations and that require management’s most difficult, subjective 
or complex judgments, often as a result of the need to make estimates about the effects of matters that are 
inherently uncertain. 

Revenue Recognition 

We recognize revenue when it is realized or realizable and earned. We consider revenue realized 

or realizable and earned when it has persuasive evidence of an arrangement, delivery has occurred, the 
sales price is fixed or determinable, and collection is reasonably assured in conformity with Staff 
Accounting Bulletin No. 104, Revenue Recognition. 

We derive revenue primarily from sales of ethanol and related co-products. We recognize revenue 

when title transfers to our customers, which is generally upon the delivery of these products to a 
customer’s designated location. These deliveries are made in accordance with sales commitments and 
related sales orders entered into with customers either verbally or in written form. The sales commitments 
and related sales orders provide quantities, pricing and conditions of sales. In this regard, we engage in 
three basic types of revenue generating transactions: 

•  As a producer.  Sales as a producer consist of sales of our inventory produced at our facilities. 

•  As a merchant.  Sales as a merchant consist of sales to customers through purchases from 

third-party suppliers in which we may or may not obtain physical control of the ethanol or co-
products, though ultimately titled to us, in which shipments are directed from our suppliers to 

-44- 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  
 
  
 
  
  
  
  
our terminals or direct to our customers but for which we accept the risk of loss in the 
transactions. 

•  As an agent.  Sales as an agent consist of sales to customers through purchases from third-
party suppliers in which, depending upon the terms of the transactions, title to the product 
may technically pass to us, but the risk and rewards of inventory ownership remains with 
third-party suppliers as we receive a predetermined service fee under these transactions and 
therefore act predominantly in an agency capacity. When acting as an agent for third-party 
suppliers, we conduct back-to-back purchases and sales in which we match ethanol purchase 
and sales contracts of like quantities and delivery periods. 

We have employed the principles detailed in Emerging Issues Task Force (“EITF”) Issue No. 99-

19, Reporting Revenue Gross as a Principal Versus Net as an Agent, as guidance in our revenue 
recognition policies. Revenue from sales of third-party ethanol and its co-products is recorded net of costs 
when we are acting as an agent between the customer and supplier and gross when we are a principal to 
the transaction. Several factors are considered to determine whether we are acting as an agent or principal, 
most notably whether we are the primary obligor to the customer, whether we have inventory risk and 
related risk of loss or whether we add meaningful value to the vendor’s product or service. Consideration 
is also given to whether we have latitude in establishing the sales price or have credit risk, or both. 

We record revenues based upon the gross amounts billed to our customers in transactions where 
we act as a producer or a merchant and obtain title to ethanol and its co-products and therefore own the 
product and any related, unmitigated inventory risk for the ethanol, regardless of whether we actually 
obtain physical control of the product. When we act in an agency capacity, we record revenues on a net 
basis, or our predetermined agency fees only, based upon the amount of net revenues retained in excess of 
amounts paid to suppliers. 

Consolidation of Variable Interest Entities. 

We have determined that Front Range meets the definition of a variable interest entity under the 

Financial Accounting Standards Board’s (“FASB”) Financial Interpretation No. (“FIN”) 46(R), 
Consolidation of Variable Interest Entities. We have also determined that we are the primary beneficiary 
and we are therefore required to treat Front Range as a consolidated subsidiary for financial reporting 
purposes rather than use equity investment accounting treatment. As a result, we have consolidated the 
financial results of Front Range, including its entire balance sheet with the balance of the noncontrolling 
interest displayed between liabilities and equity, and the income statement after intercompany 
eliminations with an adjustment for the noncontrolling interest in net income since our acquisition on 
October 17, 2006. Under FIN 46(R), and as long as we are deemed the primary beneficiary of Front 
Range, we must treat Front Range as a consolidated subsidiary for financial reporting purposes. 

Impairment of Intangible and Long-Lived Assets  

Our intangible assets, including goodwill, were derived from the acquisition of our interest in 

Front Range in 2006 and our acquisition of Kinergy in 2005 in connection with the Share Exchange 
Transaction. In accordance with Statement of Financial Accounting Standards (“SFAS”) No. 141, we 
allocated the respective purchase prices to the tangible assets, liabilities and intangible assets acquired 
based upon their estimated fair values. The excess purchase prices over the fair values of the assets 
acquired and liabilities assumed were recorded as goodwill. Our long-lived assets are primarily associated 
with our ethanol production facilities.  

-45- 

 
We account for goodwill and intangible assets with indefinite lives in accordance with SFAS No. 

142. We review these assets at least annually, or more frequently if impairment indicators arise. In our 
review, we determine the fair value of these assets using market multiples and discounted cash flow 
modeling and compare it to the net book value of the acquired assets. Any assessed impairments will be 
recorded permanently and expensed in the period in which the impairment is determined. If it is 
determined through our assessment process that any of our intangible assets require impairment charges, 
they will be recorded in the line item other operating charges in the consolidated statements of operations. 
We performed our annual review of impairment and we have not recognized any impairment losses on 
any of our intangible assets through December 31, 2007. 

We evaluate impairment of long-lived assets in accordance with SFAS No. 144, Accounting for 

the Impairment or Disposal of Long-Lived Assets. We assess the impairment of long-lived assets, 
including property and equipment and purchased intangibles subject to amortization, when events or 
changes in circumstances indicate that suggest the fair value of assets could be less then their net book 
value. In such event, we assess long-lived assets for impairment by determining their fair value based on 
the forecasted, undiscounted cash flows the assets are expected to generate plus the net proceeds expected 
from the sale of the asset. An impairment loss would be recognized when the fair value is less than the 
related asset’s net book value, and an impairment expense would be recorded in the amount of the 
difference. Forecasts of future cash flows are judgments based on our experience and knowledge of our 
operations and the industries in which we operate. These forecasts could be significantly affected by 
future changes in market conditions, the economic environment, including inflation, and capital spending 
decisions of our customers. We have not recognized any impairment losses on long-lived assets through 
December 31, 2007. 

Stock-Based Compensation 

Effective January 1, 2006, we adopted the fair value method of accounting for employee stock 
compensation cost pursuant to SFAS No. 123(R), Share-Based Payments. Prior to that date, we used the 
intrinsic value method under Accounting Policy Board Opinion No. 25 to recognize compensation cost. 
Under the method of accounting for the change to the fair value method, compensation cost recognized is 
the same amount that would have been recognized if the fair value method would have been used for all 
awards granted. The effects on net income and income per share had the fair value method been applied 
to all outstanding and unvested awards in each period are reflected in Note 15 of the consolidated 
financial statements. 

Our assumptions made for purposes of estimating the fair value of our stock options, as well as a 
summary of the activity under our stock option plan are included in Note 15 of the consolidated financial 
statements. 

We account for the stock options granted to non-employees in accordance with EITF Issue No. 
96-18, Accounting for Equity Instruments That Are Issued to Other Than Employees for Acquiring, or in 
Conjunction with Selling, Goods or Services, and SFAS No. 123(R). 

Derivative Instruments and Hedging Activities 

Our business and activities expose us to a variety of market risks, including risks related to 

changes in commodity prices and interest rates. We monitor and manage these financial exposures as an 
integral part of our risk management program. This program recognizes the unpredictability of financial 
markets and seeks to reduce the potentially adverse effects that market volatility could have on operating 
results. We account for our use of derivatives related to our hedging activities pursuant to SFAS No. 133, 
Accounting for Derivative Instruments and Hedging Activities, in which we recognize all of our derivative 

-46- 

 
instruments in our statement of financial position as either assets or liabilities, depending on the rights or 
obligations under the contracts. We have designated and documented contracts for the physical delivery 
of commodity products to and from counterparties as normal purchases and normal sales. Derivative 
instruments are measured at fair value, pursuant to the definition found in SFAS No. 107, Disclosures 
about Fair Value of Financial Instruments. Changes in the derivative’s fair value are recognized currently 
in earnings unless specific hedge accounting criteria are met. Special accounting for qualifying hedges 
allows a derivative’s effective gains and losses to be deferred in accumulated other comprehensive 
income and later recorded together with the gains and losses to offset related results on the hedged item in 
the statements of operations. Companies must formally document, designate and assess the effectiveness 
of transactions that receive hedge accounting. 

The estimated gains (losses) on our derivatives were as follows (in thousands):  

Commodity futures 
Commodity options 
Interest rate options 

Total 

December 31, 

$ 

2007 
(6,702) 
1,371 
(5,590) 
$  (10,921) 

2006 

646  
(24) 
(17) 
605 

$ 

$ 

Allowance for Doubtful Accounts  

We primarily sell ethanol to gasoline refining and distribution companies. We also sell WDG to 

dairy operators and animal feed distributors. We had significant concentrations of credit risk as of 
December 31, 2007, as described in Note 1 to our consolidated financial statements. However, those 
customers historically have had good credit ratings and historically we have collected amounts that were 
billed to those customers. Receivables from customers are generally unsecured. We continuously monitor 
our customer account balances and actively pursue collections on past due balances.  

We maintain an allowance for doubtful accounts for balances that appear to have specific 
collection issues. Our collection process is based on the age of the invoice and requires attempted contacts 
with the customer at specified intervals. If after a specified number of days, we have been unsuccessful in 
our collection efforts, we consider recording a bad debt allowance for the balance in question. We would 
eventually write-off accounts included in our allowance when we have determined that collection is not 
likely. The factors considered in reaching this determination are the apparent financial condition of the 
customer, and our success in contacting and negotiating with the customer.  

Costs of Start-up Activities 

Start-up activities are defined broadly in Statement of Position 98-5, Reporting on the Costs of 

Start-Up Activities, as those one-time activities related to opening a new facility, introducing a new 
product or service, conducting business in a new territory, conducting business with a new class of 
customer or beneficiary, initiating a new process in an existing facility, commencing some new operation 
or activities related to organizing a new entity. Our start-up activities consist primarily of costs associated 
with new or potential sites for ethanol production facilities. We expense all the costs associated with a 
potential site, until the site is considered viable by management, at which time costs would be considered 
for capitalization based on authoritative accounting literature. These costs are included in selling, general, 
and administrative expenses in our consolidated statements of operations.  

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Impact of New Accounting Pronouncements 

In March 2008, the FASB issued SFAS No. 161, Disclosure about Derivative Instruments and 
Hedging Activities, an amendment of FASB Statement No. 133. SFAS No. 161 changes the disclosure 
requirements for derivative instruments and hedging activities. Entities are required to provide enhanced 
disclosures about (a) how and why an entity uses derivative instruments, (b) how derivative instruments 
and related hedged items are accounted for under Statement No. 133 and its related interpretations and (c) 
how derivative instruments and related hedged items affect an entity’s financial position, financial 
performance and cash flows. SFAS No. 161 is effective for financial statements issued for fiscal years and 
interim periods beginning after November 15, 2008, with early application encouraged. We are currently 
evaluating the impact SFAS No. 161 may have on our consolidated financial statements. 

In December 2007, the FASB issued SFAS No. 141(R), Business Combinations. SFAS No. 

141(R) retains the fundamental requirements in SFAS No. 141 that the acquisition method of accounting 
be used for all business combinations and for an acquirer to be identified for each business combination. 
SFAS No. 141(R) requires an acquirer to recognize the assets acquired, the liabilities assumed, and any 
noncontrolling interest in the acquiree at the acquisition date, measured at their fair values as of that date, 
with limited exceptions specified in SFAS No. 141(R). In addition, SFAS No. 141(R) requires acquisition 
costs and restructuring costs that the acquirer expected but was not obligated to incur to be recognized 
separately from the business combination, therefore, expensed instead of part of the purchase price 
allocation. SFAS No. 141(R) will be applied prospectively to business combinations for which the 
acquisition date is on or after the beginning of the first annual reporting period beginning on or after 
December 15, 2008. Early adoption is prohibited. We expect to adopt SFAS No. 141(R) to any business 
combinations with an acquisition date on or after January 1, 2009. 

In December 2007, the FASB issued SFAS No. 160, Noncontrolling Interests in Consolidated 

Financial Statements, an amendment to ARB No. 51. SFAS No. 160 changes the accounting and reporting 
for minority interests, which will be recharacterized as noncontrolling interests and classified as a 
component of equity. SFAS No. 160 is effective for fiscal years, and interim periods within those fiscal 
years, beginning on or after December 15, 2008. Early adoption is prohibited. We are currently evaluating 
the impact SFAS No. 160 may have on our consolidated financial statements. 

In February 2007, the FASB issued SFAS No. 159, The Fair Value Option for Financial Assets 

and Financial Liabilities. SFAS No. 159 permits an entity to irrevocably elect fair value on a contract-by-
contract basis as the initial and subsequent measurement attribute for many financial assets and liabilities 
and certain other items including insurance contracts. Entities electing the fair value option would be 
required to recognize changes in fair value in earnings and to expense upfront costs and fees associated 
with the item for which the fair value option is elected. SFAS No. 159 is effective for fiscal years 
beginning after November 15, 2007. Early adoption is permitted as of the beginning of a fiscal year that 
begins on or before November 15, 2007, provided the entity also elects to apply the provisions of SFAS 
No. 157, Fair Value Measurements. We do not expect the adoption of SFAS No. 159 to have a material 
impact on our financial condition or results of operations. 

In September 2006, the FASB issued SFAS No. 157. This new statement provides a single 

definition of fair value, together with a framework for measuring it, and requires additional disclosure 
about the use of fair value to measure assets and liabilities. SFAS No. 157 also emphasizes that fair value 
is a market-based measurement, not an entity-specific measurement, and sets out a fair value hierarchy 
with the highest priority being quoted prices in active markets. The original required effective date of 
SFAS No. 157 was the first quarter of 2008, however, the FASB issued FASB Staff Position 157-2, 
Effective Date of FASB Statement No. 157, which deferred the adoption date by one year for all 

-48- 

 
nonfinancial assets and nonfinancial liabilities. We are currently evaluating the impact SFAS No. 157 
may have on our consolidated financial statements.  

Item 7A.  Quantitative and Qualitative Disclosures About Market Risk. 

We are exposed to various market risks, including changes in commodity prices and interest rates. 

Market risk is the potential loss arising from adverse changes in market rates and prices. In the ordinary 
course of business, we enter into various types of transactions involving financial instruments to manage 
and reduce the impact of changes in commodity prices and interest rates. We do not enter into derivatives 
or other financial instruments for trading or speculative purposes.  

Commodity Risk – Cash Flow Hedges 

As part of our risk management strategy, we use derivative instruments to protect cash flows from 

fluctuations caused by volatility in commodity prices for periods of up to twelve months. These hedging 
activities are conducted to protect gross margins to reduce the potentially adverse effects that market 
volatility could have on operating results by minimizing our exposure to price volatility on ethanol sale 
and purchase commitments where the price is to be set at a future date and/or if the contract specifies a 
floating or index-based price for ethanol that is based on either the New York Mercantile Exchange price 
of gasoline or the Chicago Board of Trade price of ethanol. In addition, we hedge anticipated sales of 
ethanol to minimize our exposure to the potentially adverse effects of price volatility. These derivatives 
are designated and documented as SFAS No. 133 cash flow hedges and effectiveness is evaluated by 
assessing the probability of the anticipated transactions and regressing commodity futures prices against 
our purchase and sales prices. Ineffectiveness, which is defined as the degree to which the derivative does 
not offset the underlying exposure, is recognized immediately in income. For the year ended December 
31, 2007, a gain from ineffectiveness in the amount of $2,832,000 and an effective loss in the amount of 
$1,680,000 were recorded in cost of goods sold. For the year ended December 31, 2006, losses of 
ineffectiveness in the amount of $239,000 and an effective loss in the amount of $438,000 were recorded 
in cost of goods sold. For the year ended December 31, 2006, an effective gain in the amount of 
$1,281,000 was recorded in sales. Amounts remaining in accumulated other comprehensive income (loss) 
will be reclassified to income upon the recognition of the related purchase or sale. Accumulated other 
comprehensive loss in the amount of $455,000 associated with commodity cash flow hedges is expected 
to be recognized in income over the next twelve months. The notional balance of these derivatives as of 
December 31, 2007 and 2006 was $2,427,000 and $11,588,000, respectively.  

Commodity Risk – Non-Designated Derivatives 

As part of our risk management strategy, we use forward contracts on corn, crude oil and 

reformulated blendstock for oxygenate blending gasoline to lock in prices for certain amounts of corn, 
denaturant and ethanol, respectively. These derivatives are not designated under SFAS No. 133 for 
special hedge accounting treatment. The changes in fair value of these contracts are recorded on the 
balance sheet and recognized immediately in cost of goods sold. We recognized a loss of $6,484,000 (of 
which $3,532,000 is related to settled non-designated hedges) and $0 as the change in the fair value of 
these contracts for the year ended December 31, 2007 and 2006, respectively. The notional balances 
remaining on the contracts as of December 31, 2007 and 2006 were $29,999,000 and $0, respectively. 

Interest Rate Risk 

As part of our interest rate risk management strategy, we use derivative instruments to minimize 

significant unanticipated earnings fluctuations that may arise from rising variable interest rate costs 
associated with existing and anticipated borrowings. To meet these objectives we purchased interest rate 

-49- 

 
caps and swaps. The rate for notional balances of interest rate caps ranging from $0 to $21,588,000 is 
5.50%-6.00% per annum. The rate for notional balances of interest rate swaps ranging from $0 to 
$63,219,000 is 5.01%-8.16% per annum. These derivatives are designated and documented as SFAS No. 
133 cash flow hedges and effectiveness is evaluated by assessing the probability of anticipated interest 
expense and regressing the historical value of the rates against the historical value in the existing and 
anticipated debt. Ineffectiveness, reflecting the degree to which the derivative does not offset the 
underlying exposure, is recognized immediately in income. For the year ended December 31, 2007, losses 
from ineffectiveness in the amount of $4,836,000, losses from effectiveness in the amount of $147,000 
and losses from undesignated hedges in the amount of $606,000 were recorded in other income (expense). 
For the year ended December 31, 2006, ineffectiveness in the amount of $24,000 was recorded in other 
income (expense). There was no ineffectiveness for the year ended December 31, 2005. Amounts 
remaining in accumulated other comprehensive income will be reclassified to income upon the 
recognition of the hedged interest expense. For the year ending December 31, 2008, we anticipate 
reclassifying $595,000 to income associated with our cash flow interest rate caps and swaps. 

We marked all of our derivative instruments to fair value at each period end, except for those 
derivative contracts which qualified for the normal purchase and sale exemption pursuant to SFAS No. 
133. According to our designation of the derivative, changes in the fair value of derivatives are reflected 
in net income or accumulated other comprehensive income. 

Accumulated Other Comprehensive Income  

Accumulated other comprehensive income relative to derivatives for the year ended December 

31, 2007 is as follows (in thousands): 

Beginning balance, January 1, 2007 

Net changes 
Less:  Amount reclassified to cost of goods sold 
Less:  Amount reclassified to other income (expense) 

Ending balance, December 31, 2007 

$  

————— 

*Calculated on a pretax basis 

Interest Rate 
Commodity 
Derivatives 
Derivatives 
Gain/(Loss)*  Gain/(Loss)* 
$  

$ 

461 
(2,596) 
(1,680) 
— 
(455) 

(265) 
(1,810) 
— 
(147) 
(1,928) 

$  

The estimated fair values of our derivatives were as follows (in thousands): 

Commodity futures 
Interest rate options 

Total 

Material Limitations 

December 31, 

2007 
(1,649) 
(7,091) 
(8,740) 

$ 

$ 

2006 
329 
125 
454 

$ 

$ 

The disclosures with respect to the above noted risks do not take into account the underlying 

commitments or anticipated transactions. If the underlying items were included in the analysis, the gains 
or losses on the futures contracts may be offset. Actual results will be determined by a number of factors 
that are not generally under our control and could vary significantly from the factors disclosed.  

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We are exposed to credit losses in the event of nonperformance by counterparties on the above 
instruments, as well as credit or performance risk with respect to our hedged customers’ commitments. 
Although nonperformance is possible, we do not anticipate nonperformance by any of these parties.  

Item 8.  Financial Statements and Supplementary Data. 

Reference is made to the financial statements included in this report, which begin at Page F-1. 

Item 9.  Changes in and Disagreements with Accountants on Accounting and Financial Disclosure. 

None. 

Item 9A.  Controls and Procedures.  

We conducted an evaluation under the supervision and with the participation of our management, 

including our Chief Executive Officer and Chief Financial Officer, of the effectiveness of the design and 
operation of our disclosure controls and procedures. The term “disclosure controls and procedures,” as 
defined in Rules 13a-15(e) and 15d-15(e) under the Securities and Exchange Act of 1934, as amended 
(“Exchange Act”), means controls and other procedures of a company that are designed to ensure that 
information required to be disclosed by the company in the reports it files or submits under the Exchange 
Act is recorded, processed, summarized and reported, within the time periods specified in the Securities 
and Exchange Commission’s rules and forms. Disclosure controls and procedures also include, without 
limitation, controls and procedures designed to ensure that information required to be disclosed by a 
company in the reports that it files or submits under the Exchange Act is accumulated and communicated 
to the company’s management, including its principal executive and principal financial officers, or 
persons performing similar functions, as appropriate, to allow timely decisions regarding required 
disclosure. Based on this evaluation, our Chief Executive Officer and Chief Financial Officer concluded 
as of December 31, 2007 that our disclosure controls and procedures were not effective at a reasonable 
assurance level due to the two material weaknesses discussed immediately below.  

In light of the two material weaknesses described below, we performed additional analysis and 

other post-closing procedures to ensure that our consolidated financial statements were prepared in 
accordance with generally accepted accounting principles. Accordingly, we believe that the consolidated 
financial statements included in this report fairly present, in all material respects, our financial condition, 
results of operations and cash flows for the periods presented. 

Management’s Report on Internal Control Over Financial Reporting  

Our management is responsible for establishing and maintaining adequate internal control over 

financial reporting as defined in Rules 13a-15(f) and 15d-15(f) under the Exchange Act. Our internal 
control over financial reporting is designed to provide reasonable assurance regarding the reliability of 
financial reporting and the preparation of financial statements for external purposes in accordance with 
generally accepted accounting principles. Our internal control over financial reporting includes those 
policies and procedures that: 

(i) 

(ii) 

pertain to the maintenance of records that, in reasonable detail, accurately and fairly 
reflect the transactions and dispositions of our assets; 

provide reasonable assurance that transactions are recorded as necessary to permit 
preparation of financial statements in accordance with generally accepted accounting 

-51- 

 
principles, and that our receipts and expenditures are being made only in accordance with 
authorizations of our management and directors; and 

(iii) 

provide reasonable assurance regarding prevention or timely detection of unauthorized 
acquisition, use or disposition of our assets that could have a material affect on our 
financial statements. 

Because of its inherent limitations, internal control over financial reporting may not prevent or 

detect misstatements. Also, projections of any evaluation of effectiveness to future periods are subject to 
the risk that controls may become inadequate because of changes in conditions, or that the degree of 
compliance with the policies or procedures may deteriorate.  

A material weakness is defined by the Public Company Accounting Oversight Board’s Audit 
Standard No. 5 as being a deficiency, or combination of deficiencies, in internal control over financial 
reporting, such that there is a reasonable possibility that a material misstatement of the company’s annual 
or interim financial statements will not be prevented or detected on a timely basis by the company’s 
internal controls.  

Management assessed and evaluated the effectiveness of our internal control over financial 
reporting as of December 31, 2007. Based on the results of management’s assessment and evaluation, our 
Chief Executive Officer and Chief Financial Officer concluded that as of December 31, 2007, the 
following two material weaknesses in our internal control over financial reporting existed:   

(1)  We did not have adequate internal control over our accrual of construction-related costs 

for our ethanol production facilities; and 

(2)  We did not exercise oversight of our personnel or their actions in a manner reasonably 

calculated to ensure compliance under the Credit Agreement governing our credit facility.   

The foregoing material weaknesses are described in detail below under the caption “Material 
Weaknesses and Related Remediation Initiatives.” As a result of these material weaknesses, our Chief 
Executive Officer and Chief Financial Officer concluded that we did not maintain effective internal 
control over financial reporting as of December 31, 2007. If not remediated, these material weaknesses 
could result in one or more material misstatements in our reported financial statements in a future annual 
or interim period. 

In making its assessment of our internal control over financial reporting, management used 
criteria issued by the Committee of Sponsoring Organizations of the Treadway Commission (“COSO”) in 
its Internal Control—Integrated Framework. Because of the material weaknesses described above, 
management believes that, as of December 31, 2007, we did not maintain effective internal control over 
financial reporting. 

Our independent registered public accounting firm, Hein & Associates LLP, independently 

assessed the effectiveness of our internal control over financial reporting. Hein & Associates LLP has 
issued an attestation report concurring with management’s assessment, which is included herein. 

Inherent Limitations on the Effectiveness of Controls 

Management does not expect that our disclosure controls and procedures or our internal control 
over financial reporting will prevent or detect all errors and all fraud. A control system, no matter how 
well conceived and operated, can provide only reasonable, not absolute, assurance that the objectives of 

-52- 

 
the control systems are met. Further, the design of a control system must reflect the fact that there are 
resource constraints, and the benefits of controls must be considered relative to their costs. Because of the 
inherent limitations in a cost-effective control system, no evaluation of internal control over financial 
reporting can provide absolute assurance that misstatements due to error or fraud will not occur or that all 
control issues and instances of fraud, if any, have been or will be detected.  

These inherent limitations include the realities that judgments in decision-making can be faulty 
and that breakdowns can occur because of a simple error or mistake. Controls can also be circumvented 
by the individual acts of some persons, by collusion of two or more people, or by management override of 
the controls. The design of any system of controls is based in part on certain assumptions about the 
likelihood of future events, and there can be no assurance that any design will succeed in achieving its 
stated goals under all potential future conditions. Projections of any evaluation of controls effectiveness to 
future periods are subject to risks. Over time, controls may become inadequate because of changes in 
conditions or deterioration in the degree of compliance with policies or procedures.  

Material Weaknesses and Related Remediation Initiatives 

(1)  We did not have adequate internal control over our accrual of construction-related costs 

for our ethanol production facilities, as evidenced by the following control deficiencies: 

•  Our auditors discovered that our accounting staff failed to accrue construction-related 

costs represented by certain invoices that were set aside for review but overlooked by our 
accounting staff. During the first quarter of 2008, we implemented the following 
processes to remediate this deficiency: 

o  After our accounts payable subledger is closed for the period, our accounting 

staff is to communicate with our construction managers to determine whether any 
invoices or progress billings under their review for the reporting period have not 
been recorded in our accounts payable subledger; and 

o  After our accounts payable subledger is closed for the period, our accounting 
staff is to segregate any future invoices received for posting that relate to the 
reporting period. These invoices are to be compared to accrual balances to 
support the existing construction accruals.  

•  Our period-end closing process lacked a method for determining an estimate for invoices 
not yet received for construction costs as to which we believe a contract liability existed 
at the end of the reporting period. During the first quarter of 2008, we implemented the 
following processes to remediate this deficiency: 

o  During our period-end closing process, and after our accounts payable subledger 
is closed for the period, our accounting staff and senior management are to 
perform construction cost trending analyses for subsidiaries with significant 
construction related activities during the period. The trend analyses are to be 
based on vendor activity and management is to review the trend for 
reasonableness. 

We believe that we did, however, maintain adequate controls to ensure accruals were properly 

recorded for non-construction related invoices received subsequent to the closing of our accounts payable 
subledger. This material weakness resulted in adjustments to our consolidated balance sheet as of 
December 31, 2007 but had no impact to our consolidated statements of operations for the year ended 

-53- 

 
December 31, 2007. If not remediated, this material weakness could, however, result in one or more 
material misstatements in our reported financial statements in a future annual or interim period. 

(2)  We did not exercise oversight of our personnel or their actions in a manner reasonably 
calculated to ensure compliance under the Credit Agreement governing our credit facility, as evidenced 
by the following control deficiencies:   

•  Under the terms of the Credit Agreement, we are generally required to deposit all 

revenues related to the production facilities financed under the Credit Agreement in 
segregated revenue accounts which are controlled by our lenders. The Credit Agreement 
includes specific covenants governing our use of those funds. On Wednesday, March 12, 
2008, our senior management was informed that an unauthorized deviation from the 
Credit Agreement requirements related to the segregated revenue accounts had occurred.  
These actions, which we believe began in August 2007, were apparently undertaken for 
the purpose of optimizing our cash position and resulted in the violation of a number of 
covenants in the Credit Agreement. Based our current analysis, we believe that the net 
amount of cash that was diverted from the segregated revenue accounts to other internal 
uses was approximately $3.9 million, which constituted a default under the Credit 
Agreement.   

•  The Credit Agreement required that, on the date of the initial loan fundings for our 

Madera and Boardman facilities, a designated debt service reserve related to the loans 
should have been deposited into a debt service reserve account controlled by our lenders.  
The amount of $3.4 million has not been deposited as required by the Credit Agreement, 
which constitutes a default under the Credit Agreement.   

•  The Credit Agreement limits us to no more than seven separate Eurodollar loans 

outstanding at any time. We had eight Eurodollar loans outstanding, which constitutes a 
default under the Credit Agreement.   

•  The Credit Agreement provides that the “final completion” of our Madera and Boardman 
facilities should already have occurred. One of the conditions to “final completion” is that 
the borrowers pay all remaining project costs related to the construction of the particular 
plant. We are still in the process of negotiating final payments with certain contractors.  
Both facilities commenced operations and we received loan fundings for the facilities 
notwithstanding the failure to achieve “final completion” by the stated deadline, which 
constitutes a default under the Credit Agreement.   

During the first quarter of 2008, we implemented the following processes to remediate these 

deficiencies: 

•  We have reassigned cash management responsibilities to our Chief Financial Officer.   

•  Our Chief Financial Officer is to perform a review of all debt covenants in place as of 

December 31, 2007 and determine whether we are in compliance with those covenants; 
as to any covenants with which we are not in compliance, our Chief Financial Officer is 
to undertake remediation actions to ensure compliance with those covenants in the future.  

•  Our Chief Financial Officer is to review, at the end of each future reporting period, 
compliance reports prepared by his designee, for all debt covenants as to which we 
received waivers from our lenders. 

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This material weakness did not result in any adjustments to our 2007 consolidated financial 
statements. If not remediated, this material weakness could, however, result in one or more material 
misstatements in our reported financial statements in a future annual or interim period. 

Expected Remediation Date and Expenditures 

Management expects that our internal control over financial reporting as to the material 

weaknesses described above will be tested, and the material weaknesses will be remediated, by September 
30, 2008.  Management is unable, however, to estimate our expenditures associated with this remediation, 
but we do not expect them to be significant, except that we were required to pay a consent fee in the 
aggregate amount of up to approximately $600,000 in connection with the waivers from our lenders as to 
certain defaults under our Credit Agreement, including as a result of the material weaknesses described 
above that existed as of December 31, 2007. 

Changes in Internal Control over Financial Reporting 

There has been no change in our internal control over financial reporting (as defined in Rules 

13a-15(f) and 15d-15(f) under the Exchange Act) during the most recently completed fiscal quarter that 
has materially affected, or is reasonably likely to materially affect, our internal control over financial 
reporting. 

Attestation Report of Independent Registered Public Accounting Firm 

REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM 

To the Audit Committee and Management 
Pacific Ethanol, Inc. 
Sacramento, California 

We have audited Pacific Ethanol, Inc.’s internal control over financial reporting as of December 31, 2007, 
based on criteria established in Internal Control—Integrated Framework issued by the Committee of 
Sponsoring Organizations of the Treadway Commission (COSO). Pacific Ethanol, Inc.’s management is 
responsible for maintaining effective internal control over financial reporting and for its assessment of the 
effectiveness of internal control over financial reporting included in the accompanying Management’s 
Report on Internal Control Over Financial Reporting. Our responsibility is to express an opinion on the 
company’s internal control over financial reporting based on our audit. 

We conducted our audit in accordance with the standards of the Public Company Accounting Oversight 
Board (United States). Those standards require that we plan and perform the audit to obtain reasonable 
assurance about whether effective internal control over financial reporting was maintained in all material 
respects. Our audit included obtaining an understanding of internal control over financial reporting, 
assessing the risk that a material weakness exists, and testing and evaluating the design and operating 
effectiveness of internal control based on the assessed risk. Our audit also included performing such other 
procedures as we considered necessary in the circumstances. We believe that our audit provides a 
reasonable basis for our opinion. 

A company’s internal control over financial reporting is a process designed to provide reasonable 
assurance regarding the reliability of financial reporting and the preparation of financial statements for 
external purposes in accordance with generally accepted accounting principles. A company’s internal 
control over financial reporting includes those policies and procedures that (1) pertain to the maintenance 
of records that, in reasonable detail, accurately and fairly reflect the transactions and dispositions of the 

-55- 

 
assets of the company; (2) provide reasonable assurance that transactions are recorded as necessary to 
permit preparation of financial statements in accordance with generally accepted accounting principles, 
and that receipts and expenditures of the company are being made only in accordance with authorizations 
of management and directors of the company; and (3) provide reasonable assurance regarding prevention 
or timely detection of unauthorized acquisition, use, or disposition of the company’s assets that could 
have a material effect on the financial statements. 

Because of its inherent limitations, internal control over financial reporting may not prevent or detect 
misstatements. Also, projections of any evaluation of effectiveness to future periods are subject to the risk 
that controls may become inadequate because of changes in conditions, or that the degree of compliance 
with the policies or procedures may deteriorate. 

A material weakness is a deficiency, or a combination of deficiencies, in internal control over financial 
reporting, such that there is a reasonable possibility that a material misstatement of the company’s annual 
or interim financial statements will not be prevented or detected on a timely basis. The following material 
weaknesses have been identified and included in management’s assessment.   

1.  The Company did not have adequate internal control over its accrual of construction-

related costs for its ethanol production facilities; and 

2.  The Company did not exercise oversight of its personnel or their actions in a manner 
reasonably calculated to ensure compliance under the Credit Agreement governing its 
credit facility.   

These material weaknesses were considered in determining the nature, timing, and extent of audit tests 
applied in our audit of the 2007 consolidated financial statements, and this report does not affect our 
report dated March 27, 2008 on those consolidated financial statements 

In our opinion, because of the effect of the material weakness described above on the achievement of the 
objectives of the control criteria, Pacific Ethanol, Inc. has not maintained effective internal control over 
financial reporting as of December 31, 2007, based on criteria established in Internal Control—Integrated 
Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission (COSO). 

We also have audited, in accordance with the standards of the Public Company Accounting Oversight 
Board (United States), the consolidated balance sheets of Pacific Ethanol, Inc. as of December 31, 2007 
and 2006, and the related consolidated statements of operations, comprehensive income (loss), 
stockholders’ equity, and cash flows for each of the three years in the period ended December 31, 2007, 
of Pacific Ethanol, Inc. and our report dated March 27, 2008 expressed an unqualified opinion thereon. 

/s/ HEIN & ASSOCIATES LLP 

Irvine, California  
March 27, 2008 

Item 9A(T). Controls and Procedures. 

Not applicable. 

Item 9B.  Other Information. 

None. 

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Item 10.  Directors, Executive Officers and Corporate Governance. 

PART III 

The information under the captions “Information about our Board of Directors, Board 
Committees and Related Matters” and “Section 16(a) Beneficial Ownership Reporting Compliance,” 
appearing in the Proxy Statement, is hereby incorporated by reference.  

Item 11.  Executive Compensation. 

The information under the caption “Executive Compensation and Related Information,” 

appearing in the Proxy Statement, is hereby incorporated by reference.  

Item 12.  Security Ownership of Certain Beneficial Owners and Management and Related 

Stockholder Matters. 

The information under the captions “Security Ownership of Certain Beneficial Owners and 
Management” and “Equity Compensation Plan Information,” appearing in the Proxy Statement, is hereby 
incorporated by reference.  

Item 13.  Certain Relationships and Related Transactions, and Director Independence. 

The information under the captions “Certain Relationships and Related Transactions” and 

“Information about our Board of Directors, Board Committees and Related Matters—Director 
Independence” appearing in the Proxy Statement, is hereby incorporated by reference. 

Item 14.  Principal Accounting Fees and Services. 

The information under the caption “Principal Accounting Fees and Services,” appearing in the 

Proxy Statement, is hereby incorporated by reference.  

PART IV 

Item 15.  Exhibits, Financial Statement Schedules. 

(a)(1) Financial Statements 

Reference is made to the financial statements listed on and attached following the Index to 

Consolidated Financial Statements contained on page F-1 of this report. 

(a)(2) Financial Statement Schedules 

None. 

(a)(3) Exhibits 

Reference is made to the exhibits listed on the Index to Exhibits. 

-57- 

 
 
Index to Financial Statements 

Report of Independent Registered Public Accounting Firm ................................................................... F-2 

Consolidated Balance Sheets as of December 31, 2007 and 2006 ......................................................... F-3 

Consolidated Statements of Operations for the Years Ended  

December 31, 2007, 2006 and 2005 ................................................................................................. F-5 

Consolidated Statements of Comprehensive Income (Loss) for the Years Ended 

December 31, 2007, 2006 and 2005 ................................................................................................. F-6 

Consolidated Statement of Stockholders’ Equity for the Years Ended  

December 31, 2007, 2006 and 2005 ................................................................................................. F-7 

Consolidated Statements of Cash Flows for the Years Ended  

December 31, 2007, 2006 and 2005 ................................................................................................. F-10 

Notes to Consolidated Financial Statements ........................................................................................... F-12 

F-1 

 
 
REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM  

To the Board of Directors 
Pacific Ethanol, Inc. 
Sacramento, California 

We  have  audited  the  accompanying  consolidated  balance  sheets  of  Pacific  Ethanol,  Inc.  as  of 
December 31,  2007  and  2006,  and  the  related  consolidated  statements  of  operations,  comprehensive 
income  (loss),  stockholders’  equity,  and  cash  flows  for  each  of  the  three  years  in  the  period  ended 
December  31,  2007.  These  consolidated  financial  statements  are  the  responsibility  of  the  Company’s 
management. Our responsibility is to express an opinion on these consolidated financial statements based 
on our audits.  

We conducted our audits in accordance with the standards of the Public Company Accounting Oversight 
Board (United States). Those standards require that we plan and perform the audits to obtain reasonable 
assurance about whether the consolidated financial statements are free of material misstatement. An audit 
includes  examining,  on  a  test  basis,  evidence  supporting  the  amounts  and  disclosures  in  the  financial 
statements. An audit also includes assessing the accounting principles used and significant estimates made 
by management, as well as evaluating the overall presentation of the financial statements. We believe that 
our audits provide a reasonable basis for our opinion.  

In  our  opinion,  the  consolidated  financial  statements  referred  to  above  present  fairly,  in  all  material 
respects, the consolidated financial position of Pacific Ethanol, Inc. at December 31, 2007 and 2006, and 
the results of its operations and its cash flows for each of the three years in the period ended December 
31, 2007, in conformity with accounting principles generally accepted in the United States of America.  

We  also  have  audited,  in  accordance  with  the  standards  of  the  Public  Company  Accounting  Oversight 
Board (United States), Pacific Ethanol, Inc.’s internal control over financial reporting as of December 31, 
2007, based on criteria established in Internal Control—Integrated Framework issued by the Committee 
of  Sponsoring  Organizations  of  the  Treadway  Commission  (COSO).  Our  report  dated  March  27,  2008 
expressed an opinion that Pacific Ethanol, Inc. had not maintained effective internal control over financial 
reporting  as  of  December  31,  2007,  based  on  criteria  established  in  Internal  Control—Integrated 
Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission (COSO). 

/s/ HEIN & ASSOCIATES LLP 

Irvine, California 
March 27, 2008 

F-2 

 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED BALANCE SHEETS 
(in thousands) 

ASSETS 

December 31, 

2007 

2006 

Current Assets: 

Cash and cash equivalents 
Investments in marketable securities 
Accounts receivable, net (including $7 and $1,195 as 

of December 31, 2007 and 2006,  
respectively, from a related party) 

Restricted cash 
Inventories 
Prepaid expenses 
Prepaid inventory 
Derivative instruments 
Other current assets 

Total current assets 

Property and equipment, net 

Other Assets: 

Restricted cash 
Deposits and advances 
Goodwill 
Intangible assets, net 
Other assets 

Total other assets 

Total Assets 

$ 

5,707 
19,353 

$ 

44,053 
39,119 

28,034 
780 
18,540 
1,498 
3,038 
1,613 
3,630 
82,193 

468,704 

— 
81 
88,168 
6,324 
6,130 
100,703 

29,322 
1,567 
7,595 
1,053 
2,029 
551 
1,756 
127,045 

196,156 

24,851 
9,040 
85,307 
10,155 
1,266 
130,619 

$ 

651,600 

$ 

453,820 

The accompanying notes are an integral part of these consolidated financial statements. 
F-3 

 
  
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED BALANCE SHEETS (CONTINUED) 
(in thousands, except shares and par value) 

LIABILITIES AND STOCKHOLDERS’ EQUITY 

Current Liabilities: 

Accounts payable – trade  
Accrued liabilities 
Accounts payable and accrued liabilities – construction-related 
Contract retentions 
Other liabilities – related parties 
Current portion – long-term notes payable 
Short-term note payable 
Derivative instruments 
Other current liabilities 

Total current liabilities 

Notes payable, net of current portion 

Other liabilities 

Total Liabilities 

Commitments and contingencies (Notes 9, 16 and 17) 

Noncontrolling interest in variable interest entity 

Stockholders’ Equity: 

Preferred stock, $0.001 par value; 10,000,000 shares authorized; 
5,315,625 and 5,250,000 shares issued and outstanding as of 
December 31, 2007 and 2006, respectively 

Common stock, $0.001 par value; 100,000,000 shares 

authorized; 40,606,214 and 40,269,627 shares issued and 
outstanding as of December 31, 2007 and 2006, 
respectively  

Additional paid-in capital 
Accumulated other comprehensive income (loss) 
Accumulated deficit 

Total stockholders’ equity 

$ 

December 31, 

2007 

2006 

$ 

22,641 
5,570 
55,203 
5,358 
900 
11,098 
6,000 
10,353 
2,956 
120,079 

151,188 

1,965 

273,232 

8,958 
3,130 
3,031 
357 
9,422 
4,125 
— 
97 
1,831 
30,951 

28,970 

1,091 

61,012 

96,082 

94,363 

5 

5 

41 
402,932 
(2,383) 
(118,309) 
282,286 

40 
397,536 
545 
(99,681) 
298,445 

Total Liabilities and Stockholders’ Equity 

$ 

651,600 

$ 

453,820 

The accompanying notes are an integral part of these consolidated financial statements. 
F-4 

 
  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF OPERATIONS 
(in thousands, except per share data) 

Years Ended December 31, 

2007 

2006 

2005 

Net sales (including $6,039, $16,985 and 

$9,060 for the years ended December 31, 
2007, 2006 and 2005, respectively, to a 
related party) 
Cost of goods sold 
Gross profit 
Selling, general and administrative expenses  
Income (loss) from operations 
Other income (expense), net 
Income (loss) before provision for income 

taxes and noncontrolling interest in 
variable interest entity 
Provision for income taxes 
Income (loss) before noncontrolling 
interest in variable interest entity  

Noncontrolling  interest  in  variable  interest 

entity 
Net loss 
Preferred stock dividends 
Deemed dividend on preferred stock 
Loss available to common stockholders 
Net loss per share, basic and diluted 
Weighted-average shares outstanding, 

basic and diluted 

$ 

$ 
$ 

 $ 
$ 

461,513  $ 
428,614 
32,899 
30,822 
2,077 
(6,801) 

(4,724) 
— 

(4,724) 

(9,676) 
(14,400)  $ 
(4,200)  $ 
(28) 
(18,628)  $ 
(0.47)  $ 

$ 

226,356 
201,527 
24,829 
24,641 
188 
3,426 

3,614 
— 

3,614 

(3,756) 
(142) 
(2,998) 
(84,000) 
(87,140) 
(2.50) 

$ 
$ 

$ 
$ 

87,599 
84,444 
3,155 
12,638 
(9,483) 
(440) 

(9,923) 
— 

(9,923) 

— 
(9,923) 
— 
— 
(9,923) 
(0.40) 

39,895 

34,855 

25,066 

The accompanying notes are an integral part of these consolidated financial statements. 
F-5 

 
  
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF COMPREHENSIVE INCOME (LOSS) 
(in thousands) 

Net loss 
Other comprehensive income (loss), net of 

tax:  

Cash flow hedges: 

Net change in the fair value of 

derivatives, net of tax  
Unrealized gain on restricted available-for-

sale securities 

Comprehensive income (loss) 

For the Years Ended December 31, 

2007 

2006 

2005 

$ 

(14,400)  $ 

(142) 

$ 

(9,923) 

(2,579) 

$ 

(349) 
(17,328)  $ 

196 

349 
403 

$ 

— 

— 
(9,923) 

The accompanying notes are an integral part of these consolidated financial statements. 
F-6 

 
  
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF STOCKHOLDERS’ EQUITY  
FOR THE YEARS ENDED DECEMBER 31, 2007, 2006 AND 2005 
(in thousands) 

Preferred Stock 

Common Stock 

Shares 

Amount 

Shares 

Amount 

Additional 
Paid-In 
Capital 

Accumulated 
Other 
Comprehensive 
Income (Loss) 

Balances, January 1, 2005 

Amounts received from shareholder 

Issuance of shares in private placement, net of 

offering costs of $2,125 

Share exchange 

Acquisition costs in excess of cash acquired 

Compensation expense related to issuance of 

warrants for consulting services 

Stock issued for exercise of warrants for cash 

Stock issued for cashless exercise of warrants 

Compensation expense for options issued to 

employees 

Compensation expense for employee option 

converted into a warrant 

Stock issued for exercise of stock options for 

cash 

Stock issued for cashless exercise of stock 

options 

Issuance of stock to employees 

Conversion of LDI debt  

Comprehensive loss 

Balances, December 31, 2005 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

$ 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

13,446 

$ 

13 $ 

5,004  $ 

— 

7,000 

7,090 

— 

— 

237 

34 

— 

— 

78 

89 

70 

830 

— 

—

7

7

—

—

—

—

—

—

—

1

—

1

—  

67 

18,868 

13,577 

481 

927 

490 

— 

80 

233 

450 

(1) 

651 

1,244 

— 

28,874 

$ 

29 $ 

42,071  $ 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

Accumulated 
Deficit 

Total 

$ 

(3,661) 

$ 

1,356 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

(9,923) 

67 

18,875 

13,584 

481 

927 

490 

— 

80 

233 

450 

— 

651 

1,245 

(9,923) 

$ 

(13,584) 

$ 

28,516 

The accompanying notes are an integral part of these consolidated financial statements. 
F-7 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF STOCKHOLDERS’ EQUITY  
FOR THE YEARS ENDED DECEMBER 31, 2007, 2006 AND 2005 (CONTINUED) 
(in thousands) 

Preferred Stock 

Common Stock 

Shares 

Amount 

Shares 

Amount 

Additional 
Paid-In 
Capital 

Accumulated 
Other 
Comprehensive 
Income (Loss) 

$  — 

28,874 

$ 

Balances, January 1, 2006 

Cumulative effect adjustment (Note 11) 

Issuance of preferred stock, net of offering 

costs of $1,434 

Beneficial conversion feature on issuance of 
preferred stock and preferred dividend 
declared 

Issuance of common stock for private 

investment in public equity, net of offering 
costs of $7,381 

Exercise of warrants and Accessity options 

Share-based compensation expense – restricted 

stock to employees and directors, net of 
cancellations 

Common stock issued for purchase of 42% 

interest in Front Range 

Fair value of warrants issued for purchase of 

42% interest in Front Range 

Collection of stockholder receivable 

Share-based compensation expense – options 
and warrants to employees and consultants 

Stock issued for exercise of warrants for cash 

Stock issued for cashless exercise of warrants 

Stock issued for exercise of stock options for 

cash 

Comprehensive income 

— 

— 

5,250 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

5 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

5 

— 

— 

— 

5,497 

71 

894 

2,082 

— 

— 

— 

2,518 

150 

183 

— 

40,269 

$ 

29 

— 

— 

— 

5 

— 

1 

2 

— 

— 

— 

3 

— 

— 

— 

40 

$ 

42,071  $ 

— 

82,561 

84,000 

137,614 

89 

3,047 

30,006 

5,087 

1 

3,201 

8,556 

— 

1,303 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

545 

Accumulated 
Deficit 

Total 

$ 

(13,584) 

$  28,516 

1,043 

1,043 

— 

82,566 

(86,998) 

(2,998) 

— 

— 

— 

— 

— 

— 

— 

— 

— 

— 

(142) 

137,619 

89 

3,048 

30,008 

5,087 

1 

3,201 

8,559 

— 

1,303 

403 

Balances, December 31, 2006 

5,250 

$ 

$ 

397,536 

$ 

545 

$ 

(99,681) 

$ 298,445 

The accompanying notes are an integral part of these consolidated financial statements. 

F-8 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF STOCKHOLDERS’ EQUITY  
FOR THE YEARS ENDED DECEMBER 31, 2007, 2006 AND 2005 (CONTINUED) 
(in thousands) 

Preferred Stock 

Common Stock 

Shares 

Amount 

Shares 

Amount 

Additional 
Paid-In 
Capital 

Accumulated 
Other 
Comprehensive 
Income (Loss) 

Accumulated 
Deficit 

Total 

Balances, January 1, 2007 

5,250 

$ 

5 

40,269 

$ 

40 

$ 

397,536  $ 

545 

$ 

(99,681) 

$  298,445 

Share-based compensation expense – restricted 

stock to employees and directors, net of 
cancellations 

Share-based compensation expense – options 
and warrants to employees and consultants 

Stock issued for exercise of warrants for cash 

Stock issued for exercise of stock options for 

cash 

Beneficial conversion feature on issuance of 
preferred stock and preferred dividends 
declared 

Comprehensive loss 

— 

— 

— 

— 

66 

— 

Balances, December 31, 2007 

5,316 

$ 

— 

— 

— 

— 

— 

— 

5 

(34) 

— 

128 

243 

— 

— 

40,606 

$ 

— 

— 

— 

1 

— 

— 

41 

1,729 

333 

363 

1,893 

1,078 

— 

— 

— 

— 

— 

— 

— 

— 

— 

1,729 

333 

363 

1,894 

(4,228) 

(3,150) 

— 

(2,928) 

(14,400) 

(17,328) 

$ 

402,932 

$  (2,383) 

$  (118,309) 

$ 282,286 

The accompanying notes are an integral part of these consolidated financial statements. 

F-9 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF CASH FLOWS 
(in thousands) 

Operating Activities: 

Net loss 
Adjustments to reconcile net loss to  

cash provided by (used in) operating activities: 
Depreciation and amortization of intangibles 
Noncontrolling interest in variable interest entity 
Loss on derivative instruments  
Amortization of deferred financing fees 
Non-cash compensation expense 
Non-cash consulting expense 
Loss on disposal of equipment 
Bad debt expense 
Interest expense relating to amortization of debt 

discount 

Feasibility study expensed in connection with 

acquisition of ReEnergy 

Acquisition cost expense in excess of cash 

received 

Discontinued design of cogeneration facility 
Expiration of option acquired in acquisition of 

ReEnergy 

Changes in operating assets and liabilities: 

Accounts receivable 
Restricted cash 
Notes receivable, related party 
Inventories 
Prepaid expenses and other assets 
Prepaid inventory 
Other receivable 
Accounts payable and accrued expenses 
Accounts payable, and accrued expenses (related 

party) 
Net cash provided by (used in) operating 

activities 

Investing Activities: 

Additions to property and equipment 
Restricted cash designated for construction projects 
Proceeds from sales of available-for-sale investments 
Advances on equipment  
Purchases of available-for-sale investments 
Acquisition of 42% interest in Front Range, net of 

cash received 

Net cash acquired in acquisition of Kinergy, 

ReEnergy and Accessity 

Cash payments in connection with share exchange 

transaction 

Payment on deposit 

For the Years Ended December 31, 

2007 

2006 

2005 

$ 

(14,400)  $ 

(142) 

 $ 

(9,923) 

17,513 
9,676 
6,617 
4,726 
2,074 
151 
81 
58 

— 

— 

— 
— 

— 

1,230 
787 
— 
(10,945) 
(1,649) 
(1,009) 
— 
10,332 

3,998 
3,756 
162 
1,069 
4,466 
1,782 
— 
83 

404 

— 

— 
— 

— 

(20,939) 
(1,570) 
136 
(3,697) 
(1,030) 
(679) 
—  
2,498 

(8,524) 

1,559 

16,718 

(8,144) 

(210,482) 
24,851 
19,417 
— 
— 

— 

— 

— 
— 

(82,454) 
(24,851) 
— 
(9,041) 
(28,962) 

(29,514) 

— 

—  
—  

766 
— 
— 
21 
963 
1,099 
— 
— 

428 

852 

481 
311 

120 

(2,427) 
— 
(131) 
219 
(515) 
(1,042) 
(22) 
7,242 

5,565 

4,007 

(17,273) 
— 
12,250 
— 
(15,000) 

— 

3,327 

(541) 
(14) 

Net cash used in investing activities 

$         (166,214)  $         (174,822) 

$           (17,251) 

Financing Activities: 

Proceeds from borrowings 
Proceeds from exercise of warrants and stock options 

$          137,725 
2,257 

$              1,950 
9,951 

$                   — 
939 

The accompanying notes are an integral part of these consolidated financial statements. 

F-10 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
CONSOLIDATED STATEMENTS OF CASH FLOWS (CONTINUED) 
(in thousands) 

For the Years Ended December 31, 

Cash paid for debt issuance costs 
Principal payments paid on borrowings 
Principal payments paid on borrowings (related party) 
Principal payments on capital lease 
Payment on notes payable, Kinergy and ReEnergy 
Proceeds from notes payable, related party 
Payment on notes payable, related party 
Proceeds from sale of common stock, net 
Proceeds from sale of preferred stock, net 
Preferred share dividend paid 
Dividend payments to noncontrolling interests 
Receipt of stockholder receivable 

Net cash provided by financing activities 

Net increase (decrease) in cash and cash equivalents 

Cash and cash equivalents at beginning of period 

Cash and cash equivalents at end of period 

Supplemental Information: 

Interest paid ($8,494, $671 and $298 capitalized) 

Non-cash financing and investing activities: 

Change in fair value of derivative instruments 
Preferred stock dividend declared 
Deemed dividend on preferred stock (Note 13) 
Unrealized gain on restricted available-for-sale 

securities 

Accrued additions to construction in progress 
Accounts payable converted to short-term note 

payable 

Transaction costs associated with acquisition of 42% 

interest in Front Range 

Issuance of common stock associated with acquisition 

of 42% interest in Front Range 

Issuance of warrant associated with acquisition of 

42% interest in Front Range 

Cumulative effect adjustment (Note 11) 
Conversion of debt to equity 
Purchase of ReEnergy with stock 
Capital lease obligation 
Shares contributed by stockholder in purchases of 

ReEnergy and Kinergy 

Purchases of ReEnergy and Kinergy with stock 

2007 

(10,261) 
(8,678) 
— 
(59) 
— 
— 
— 
— 
— 
(4,200) 
(5,634) 
— 
111,150 

(38,346) 

44,053 

$ 

$ 

$ 
$ 
$ 

5,707 

$ 

9,467 

2,579 
1,078 
28 

$ 

$ 
$ 
$ 

2006 
(3,036) 
(1,005) 
(3,600) 
— 
—  
— 
—  
137,619 
82,566 
(1,948) 
— 
1 
222,498 

39,532 

4,521 

44,053 

966 

196 
1,050 
84,000 

(349) 

$ 
349 
$              52,172  $              3,031 

$ 

2005 

— 
— 
— 
— 
(2,097) 
280 
(300) 
18,875 
— 
— 
— 
68 
17,765 

4,521 

— 

4,521 

387 

— 
— 
— 

$ 

$ 

$ 
$ 
$ 

$ 
— 
$                   — 

$                6,000  $ 

— 

$                    — 

$ 

$ 

$ 
$ 
$ 
$ 
$ 

$ 
$ 

— 

— 

— 
— 
— 
— 
203 

— 
— 

$ 

$ 

$ 
$ 
$ 
$ 
$ 

$ 
$ 

304 

30,008 

5,087 
2,134 
— 
— 
— 

— 
— 

$ 

$ 

$ 
$ 
 $ 
$ 
$ 

$ 
$ 

— 

— 

— 
— 
1,245 
316 
— 

1,518 
9,804 

The accompanying notes are an integral part of these consolidated financial statements. 
F-11 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

1.  ORGANIZATION, SIGNIFICANT ACCOUNTING POLICIES AND RECENT ACCOUNTING 

PRONOUNCEMENTS. 

Organization  and  Business  –  The  consolidated  financial  statements  include  the  accounts  of  Pacific 
Ethanol,  Inc.,  a  Delaware  corporation  (“Pacific  Ethanol”),  and  all  of  its  wholly-owned  subsidiaries, 
including  Pacific  Ethanol  California,  Inc.,  a  California  corporation  (“PEI  California”),  Kinergy 
Marketing,  LLC,  an  Oregon  limited  liability  company  (“Kinergy”)  and  ReEnergy,  LLC,  a  California 
limited  liability  company  (“ReEnergy”),  and,  effective  October  17,  2006,  the  consolidated  financial 
statements  of  Front  Range  Energy,  LLC,  a  Colorado  limited  liability  company  (“Front  Range”),  a 
variable-interest entity of which Pacific Ethanol, Inc. owns 42% (collectively, the “Company”).   

The Company produces and sells ethanol and its co-products, including wet distillers grain (“WDG”), and 
provides  transportation,  storage  and  delivery  of  ethanol  through  third-party  service  providers  in  the 
Western  United  States,  primarily  in  California,  Nevada,  Arizona,  Oregon,  Colorado  and  Idaho.  The 
Company  produces  its  ethanol  and  co-products  through  its  two  ethanol  production  facilities  located  in 
Madera, California and Boardman, Oregon. The Madera facility, with annual production capacity of up to 
40  million  gallons,  has  been  in  operation  since  October  2006  and  the  Boardman  facility,  with  annual 
production capacity of up to 40 million gallons, has been in operation since September 2007. In addition, 
the Company owns a 42% interest in a facility with annual production capacity of up to 50 million gallons 
in Windsor, Colorado, as a result of its acquisition of 42% of the membership interests of Front Range. 
The Company sells ethanol to gasoline refining and distribution companies and WDG to dairy operators 
and animal feed distributors. 

On October 17, 2006, Pacific Ethanol and PEI California entered into an agreement with Eagle Energy, 
LLC (“Eagle Energy”) to acquire Eagle Energy’s 42% ownership interest in Front Range by paying cash 
and  issuing  common  stock  and  a  warrant  to  purchase  common  stock  of  the  Company  in  a  transaction 
valued  at  $65,612,000.  The  results  of  operations  for  the  year  ended  December  31,  2006  consist  of  the 
Company’s operations for the twelve months and the operations of Front Range from October 18, 2006 
through December 31, 2006. (See Note 2.) 

On March 23, 2005, the Company completed a share exchange transaction with the shareholders of PEI 
California  and  the  holders  of  the  membership  interests  of  each  of  Kinergy  and  ReEnergy,  pursuant  to 
which the Company acquired all of the issued and outstanding capital stock of PEI California and all of 
the  outstanding  membership  interests  of  Kinergy  and  ReEnergy  (the  “Share  Exchange  Transaction”). 
Immediately prior to the consummation of the Share Exchange Transaction, the Company’s predecessor, 
Accessity  Corp.,  a  New  York  corporation  (“Accessity”),  reincorporated in  the State  of  Delaware  under 
the  name  “Pacific  Ethanol,  Inc”  through  a  merger  of  Accessity  with  and  into  its  then-wholly-owned 
Delaware  subsidiary  named  Pacific  Ethanol,  Inc.,  which  was  formed  for  the  purpose  of  effecting  the 
reincorporation  (the  “Reincorporation  Merger”).  In  connection  with  the  Reincorporation  Merger,  the 
shareholders of Accessity became stockholders of the Company and the Company succeeded to the rights, 
properties and assets and assumed the liabilities of Accessity. (See Note 2.) 

The Share Exchange Transaction has been accounted for as a reverse acquisition whereby PEI California 
is  deemed  to  be  the  accounting  acquiror.  The  Company  has  consolidated  the  results  of  PEI  California, 
Kinergy  and  ReEnergy  beginning  March  23,  2005,  the  date  of  the  Share  Exchange  Transaction.  The 
Company’s results of operations for the year ended December 31, 2005 consist of the operations of PEI 
California for the twelve month period and the operations of Kinergy and ReEnergy from March 23, 2005 
through December 31, 2005, and the Company’s results of operations for the year ended December 31, 
2006 include the operations of PEI California, Kinergy and ReEnergy for the entire twelve month period. 
(See Note 2.) 

F-12 

 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Liquidity - The Company has incurred significant losses in the past. For the years ended December 31, 
2007,  2006  and  2005,  the  Company  incurred  net  losses  of  approximately  $14.4  million,  $142,000  and 
$9.9 million, respectively. In March 2008, the Company became aware of various events or circumstances 
which  constituted  defaults  under  its  Credit  Agreement.  On  March  26,  2008,  the  Company  obtained 
waivers  from  its  lenders  as  to  the  defaults.  Consequently,  as  of  December  31,  2007,  certain  amounts 
borrowed under the Credit Agreement that, without the waivers, may have been classified as short-term 
liabilities  have  been  classified  as  long-term  liabilities  resulting  in  additional  working  capital  as  of 
December 31, 2007. Nevertheless, the Company had a working capital deficiency of $37.9 million as of 
December 31, 2007. Based on management's forecasts for 2008 and additional funding received in March 
2008  from  the  sale  of  preferred  stock,  management  believes  that  current  and  future  capital  resources, 
revenues generated from operations and other existing sources of liquidity, including available proceeds 
from  the  Company's  existing  debt  financing,  will  be  adequate  to  fund  its  operations  through  2008  and 
meet  its  capital  expenditure  requirements  to  reach  its  goal  of  220  million  gallons  of  annual  production 
capacity in 2008 upon completion of its Burley and Stockton facilities.  (See Notes 9 and 20.) 

Basis  of  Presentation  –  The  consolidated  financial  statements  and  related  notes  have  been  prepared  in 
accordance with accounting principles generally accepted in the United States of America and include the 
accounts of Pacific Ethanol, each of its wholly-owned subsidiaries, and effective October 17, 2006, Front 
Range. All significant intercompany accounts and transactions have been eliminated in consolidation. 

Cash  and  Cash  Equivalents  –  The  Company  considers  all  highly-liquid  investments  with  an  original 
maturity of three months or less to be cash equivalents.  

Investments in Marketable Securities – The Company’s short-term investments consist of amounts held in 
variable rate preferred stock, money market portfolio funds and United States Treasury Securities, which 
represented funds available for current operations. In accordance with Statement of Financial Accounting 
Standards  (“SFAS”)  No.  115,  Accounting  for  Certain  Investments  in  Debt  and  Equity  Securities,  these 
short-term investments are classified as available-for-sale and are carried at the fair market value. These 
securities had stated maturities beyond three months but were priced and traded as short-term instruments. 
Available-for-sale securities are marked-to-market based on quoted market values of the securities, with 
the unrealized gains and losses, net of tax, reported as a component of accumulated other comprehensive 
income (loss). Realized gains and losses on sales of available-for-sale securities are computed based upon 
the initial cost adjusted for any other-than-temporary declines in fair value. The cost of investments sold 
is determined on the specific identification method.  

Accounts Receivable and Allowance for Doubtful Accounts – Trade accounts receivable are presented at 
face value, net of the allowance for doubtful accounts.  

The Company sells ethanol to gasoline refining and distribution companies and WDG to dairy operators 
and  animal  feed  distributors  generally  without  requiring  collateral.  Due  to  a  limited  number  of  these 
customers, the Company had significant concentrations of credit risk as of December 31, 2007 and 2006, 
as described below.  

The  Company  maintains  an  allowance  for  doubtful  accounts  for  balances  that  appear  to  have  specific 
collection issues. The collection process is based on the age of the invoice and requires attempted contacts 
with  the  customer  at  specified  intervals.  If,  after  a  specified  number  of  days,  the  Company  has  been 
unsuccessful  in  its  collection  efforts,  a  bad  debt  allowance  is  recorded  for  the  balance  in  question. 
Delinquent  accounts  receivable  are  charged  against  the  allowance  for  doubtful  accounts  once 
uncollectibility  has  been  determined.  The  factors  considered  in  reaching  this  determination  are  the 
apparent  financial  condition  of  the  customer  and  the  Company’s  success  in  contacting  and  negotiating 

F-13 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

with the customer. If the financial condition of the Company’s customers were to deteriorate, resulting in 
an impairment of ability to make payments, additional allowances may be required. 

The  allowance  for  doubtful  accounts  was  $58,000  and  $83,000  as  of  December  31,  2007  and  2006, 
respectively.  The  Company  had  no  material  bad  debt  expense  for  the  period  from  January  1,  2005  to 
December  31,  2007.  The  Company  does  not  have  any  off-balance  sheet  credit  exposure  related  to  its 
customers.  

Concentrations of Credit Risk – Credit risk represents the accounting loss that would be recognized at the 
reporting date if counterparties failed completely to perform as contracted. Concentrations of credit risk, 
whether on- or off-balance sheet, that arise from financial instruments exist for groups of customers or 
counterparties  when  they  have  similar  economic  characteristics  that  would  cause  their  ability  to  meet 
contractual  obligations  to  be  similarly  affected  by  changes  in  economic  or  other  conditions  described 
below. 

Financial  instruments  that  subject  the  Company  to  credit  risk  consist  of  cash  balances  maintained  in 
excess  of  federal  depository  insurance  limits  and  accounts  receivable,  which  have  no  collateral  or 
security.  The  accounts  maintained  by  the  Company  at  financial  institutions  are  insured  by  the  Federal 
Deposit  Insurance  Corporation  up to $100,000. The Company’s  uninsured balance  was  $8,460,000  and 
$109,804,000 as of December 31, 2007 and 2006, respectively. The uninsured balance at December 31, 
2006  included  $28,000,000  of  United  States  Government  issued  marketable  securities,  including 
treasuries and agencies. The Company has not experienced any losses in such accounts and believes that 
it is not exposed to any significant risk of loss of cash. 

The Company sells fuel-grade ethanol to gasoline refining and distribution companies. During the years 
ended December 31, 2007, 2006 and 2005, the Company had sales from customers representing 10% or 
more of total net sales as follows:  

Customer A 
Customer B 
Customer C 
Customer D 

2007 

16% 
16% 
6% 
4% 

2006 

12% 
9% 
13% 
8% 

2005 

11% 
9% 
18% 
10% 

As  of  December  31,  2007,  the  Company  had  receivables  from  these  customers  of  approximately 
$5,152,000, representing 18% of total accounts receivable. As of December 31, 2006, the Company had 
receivables  from  these  customers  of  approximately  $11,468,000,  representing  39%  of  total  accounts 
receivable.  

The  Company  purchases  fuel-grade  ethanol  and  corn,  its  largest  cost  component  in  producing  ethanol, 
from  its  suppliers.  During  the  years  ended  December  31,  2007,  2006  and  2005,  the  Company  had 
purchases from ethanol and corn suppliers representing 10% or more of total purchases in the purchase 
and production of ethanol as follows:  

Supplier A 
Supplier B 
Supplier C 
Supplier D 
Supplier E 
Supplier F 

2006 

0% 
6% 
22% 
11% 
17% 
5% 

2007 

20% 
14% 
13% 
9% 
9% 
6% 

F-14 

2005 

0% 
0% 
9% 
17% 
22% 
20% 

  
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Restricted  Cash  –  Current  Asset  –  The  restricted  cash  balance  of  $780,000  and  $1,567,000  as  of 
December  31,  2007  and  2006,  respectively,  was  the  balance  of  deposits  held  at  the  Company’s  trade 
broker in connection with trading instruments entered into as part of the Company’s hedging strategy.  

Inventories – Inventories consist primarily of bulk ethanol, unleaded fuel and corn, and are valued at the 
lower-of-cost-or-market, with cost determined on a first-in, first-out basis. Inventory balances consisted 
of the following (in thousands): 

Raw materials 
Work in progress 
Finished goods 
Other 
  Total 

December 31, 

2007 

3,647 
1,809 
12,064 
1,020 
18,540 

$ 

$ 

2006 

3,709 
873 
2,452 
561 
7,595 

$ 

$ 

Property and Equipment – Property and equipment are stated at cost. Depreciation is computed using the 
straight-line method over the following estimated useful lives: 

Buildings  
Site improvements and utilities 
Facilities and plant equipment 
Other equipment and vehicles 
Office furniture, fixtures and equipment 
Water rights 

40 years 
25 years 
10 – 25 years 
7 – 10 years 
5 – 10 years 
99 years 

The  cost  of  normal  maintenance  and  repairs  is  charged  to  operations  as  incurred.  Significant  capital 
expenditures that increase the life of an asset are capitalized and depreciated over the estimated remaining 
useful  life  of  the  asset.  The  cost  of  fixed  assets  sold,  or  otherwise  disposed  of,  and  the  related 
accumulated  depreciation  or  amortization  are  removed  from  the  accounts,  and  any  resulting  gains  or 
losses are reflected in current operations. 

Restricted  Cash  –  Other  Assets  –  The  long-term  restricted  cash  balance  at  December  31,  2006  of 
$24,851,000 is the remaining balance of the $80,000,000 in cash received in connection with the issuance 
of  5,250,000  shares  of  the  Company’s  Series  A  Preferred  Stock,  which  has  been  disbursed  to  the 
Company  in  accordance  with  the  terms  of  a  deposit  agreement  between  the  Company  and  Comerica 
Bank. (See Note 13.) The restricted funds balance of $24,851,000 at December 31, 2006 consisted of cash 
and cash equivalents. 

Advertising Costs – Advertising costs are charged to expense as incurred. Advertising costs were $84,000, 
$101,000 and $0 for the years ended December 31, 2007, 2006 and 2005, respectively.  

Shipping  and  Handling  Costs  –  Shipping  and  handling  costs  are  classified  as  a  component  of  cost  of 
goods sold in the accompanying statements of operations. 

Net Income (Loss) Per Share – The Company computes income (loss) per common share in accordance 
with  the  provisions  of  SFAS  No.  128,  Earnings  Per  Share.  SFAS  No.  128  requires  companies  with 
complex capital structures to present basic and diluted earnings per share. Basic income (loss) per share is 
computed on the basis of the weighted-average number of shares of common stock outstanding during the 
period. Preferred dividends are deducted from net income and are considered in the calculation of income 
(loss) available to common stockholders in computing basic income (loss) per share. In periods in which 

F-15 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

there is a loss available to common stockholders, diluted income per share is equal to basic income per 
share.  

The following table computes basic and diluted net loss per share (in thousands, except per share data): 

Numerator (basic and diluted): 

Net loss 

Preferred stock dividends 

Deemed dividend on preferred stock 

Loss available to common stockholders 

Denominator: 
  Weighted-average common shares 
 outstanding – basic and diluted 
Net loss per share – basic and diluted 

Years Ended December 31, 

2007 

2006 

2005 

$ 

(14,400) 

$ 

(142) 

$ 

(9,923) 

(4,200) 

(28) 

(18,628) 

(2,998) 

(84,000) 

(87,140) 

— 

— 

(9,923) 

39,895 

34,855 

$ 

(0.47)    

$ 

(2.50)    $ 

25,066 

(0.40)   

There  were  an  aggregate  of  10,750,000,  14,568,000  and  3,832,000  of  potentially  dilutive  shares  from 
stock options, common stock warrants and convertible securities outstanding as of December 31, 2007, 
2006  and  2005,  respectively.  These  options,  warrants  and  convertible  securities were  not  considered in 
calculating diluted net loss per common share for the years ended December 31, 2007, 2006 and 2005, as 
their effect would be anti-dilutive. As a result, for each of the years ended December 31, 2007, 2006 and 
2005, the Company’s basic and diluted net loss per share are the same. 

Financial Instruments – SFAS No. 107, Disclosures about Fair Value of Financial Instruments, requires 
all entities to disclose the fair value of financial instruments, both assets and liabilities recognized and not 
recognized on the balance sheet, for which it is practicable to estimate fair value. This statement defines 
fair value of a financial instrument as the amount at which the instrument could be exchanged in a current 
transaction between willing parties.  

The  carrying  value  of  cash  and  cash  equivalents,  marketable  securities,  accounts  receivable,  accounts 
payable and accrued expenses are reasonable estimates of their fair value because of the short maturity of 
these  items.  The  Company  believes  the  carrying  values  of  its  notes  payable  and  long-term  debt 
approximate fair value because the interest rates on these instruments are variable. As of December 31, 
2007 and 2006, the fair value of all financial instruments approximated their carrying values. 

Costs  of  Start-Up  Activities  –  Start-up  activities  are  defined  broadly  in  American  Institute  of  Certified 
Public  Accountants  Statement  of  Position  98-5,  Reporting  on  the  Costs  of  Start-Up  Activities,  as  those 
one-time  activities  related  to  opening  a  new  facility,  introducing  a  new  product  or  service,  conducting 
business in a new territory, conducting business with a new class of customer or beneficiary, initiating a 
new process in an existing facility, commencing some new operation or activities related to organizing a 
new entity. The Company’s start-up activities consist primarily of costs associated with new or potential 
sites for ethanol production facilities. All the costs associated with a potential site are expensed, until the 
site is considered viable by management, at which time costs would be considered for capitalization based 
on  authoritative  accounting  literature.  These  costs  are  included  in  selling,  general  and  administrative 
expenses in the consolidated statements of operations. 

Deferred  Financing  Costs  –  Deferred  financing  costs,  which  are  included  in  other  assets,  are  costs 
incurred to obtain debt financing, including all related fees, and are amortized as interest expense over the 

F-16 

  
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

term of the related financing using the straight-line method which approximates the interest rate method. 
To  the  extent  these  fees  relate  to  facility  construction,  a  portion  is  capitalized  with  the  related  interest 
expense into construction in progress until such time as the facility is placed into operation. 

Consolidation of Variable-Interest Entities – In January 2003, the Financial Accounting Standards Board 
(“FASB”) issued FASB Interpretation No. (“FIN”) 46, Consolidation of Variable Interest Entities, and in 
December  2003,  amended  it  by  issuing  FIN  46(R).  FIN  46(R)  addresses  consolidation  by  business 
enterprises of variable interest entities that either: (i) do not have sufficient equity investment at risk to 
permit  the  entity  to  finance  its  activities  without  additional  subordinated  financial  support,  or  (ii)  have 
equity investors that lack an essential characteristic of a controlling financial interest. Under FIN 46(R), 
the  primary  beneficiary  of  a  variable  interest  entity  is  the  party  that  absorbs  a  majority  of  the  entity’s 
expected losses, receives a majority of its expected residual returns, or both, as a result of holding variable 
interests, which can be ownership, contractual, or other financial interests that change with the fair value 
of the entity’s net assets.  

The Company has determined that Front Range meets the definition of a variable interest entity under FIN 
46(R). The Company has also determined that it is the primary beneficiary and is therefore required to 
treat  Front  Range  as  a  consolidated  subsidiary  for  financial  reporting  purposes  rather  than  use  equity 
investment  accounting  treatment.  As  a  result,  the  Company  consolidates  the  financial  results  of  Front 
Range, including its entire balance sheet with the balance of the noncontrolling interest displayed between 
liabilities  and  equity,  and the  income  statement  after intercompany  eliminations with an  adjustment for 
the noncontrolling interest in net income, in each case since its acquisition on October 17, 2006. Under 
FIN 46(R), and as long as the Company is deemed the primary beneficiary of Front Range, it must treat 
Front Range as a consolidated subsidiary for financial reporting purposes. 

Impairment  of  Long-Lived  Assets  –  The  Company  evaluates  impairment  of  long-lived  assets  in 
accordance with SFAS No. 144, Accounting for the Impairment or Disposal of Long-Lived Assets. The 
Company assesses the impairment of long-lived assets, including property and equipment and purchased 
intangibles subject to amortization, when events or changes in circumstances indicate that the fair value of 
assets could be less then their net book value. In such event, the Company assesses long-lived assets for 
impairment by determining their fair value based on the forecasted, undiscounted cash flows the assets are 
expected to generate plus the net proceeds expected from the sale of the asset. An impairment loss would 
be  recognized  when  the  fair  value  is  less  than  the  related  asset’s  net  book  value,  and  an  impairment 
expense would be recorded in the amount of the difference. Forecasts of future cash flows are judgments 
based  on  the  Company’s  experience  and  knowledge  of  its  operations  and  the  industries  in  which  it 
operates.  These  forecasts  could  be  significantly  affected  by  future  changes  in  market  conditions,  the 
economic environment, including inflation, and capital spending decisions of the Company’s customers.  

The  Company  believes  the  future  cash  flows  to  be  received  from  its  long-lived  assets  will  exceed  the 
carrying  value  of  the  assets,  and,  accordingly,  the  Company  has  not  recognized  any  impairment  losses 
through December 31, 2007. 

Goodwill  –  Goodwill  represents  the  excess  of  cost  of  an  acquired  entity  over  the  net  of  the  amounts 
assigned  to  net  assets  acquired  and  liabilities  assumed.  The  Company  accounts  for  its  goodwill  in 
accordance with SFAS No. 142, Goodwill and Other Intangible Assets, which requires an annual review 
for  impairment,  or  more  frequently  if  indications  of  impairment  arise.  This  review  includes  the 
determination  of  each  reporting  unit’s  fair  value  using  market  multiples  and  discounted  cash  flow 
modeling. The Company is operating as a single-segmented, single-reporting unit. The estimates of future 
cash  flows  are  judgments  based  on  management’s  experience  and  knowledge  of  the  Company’s 
operations  and  the  industries  in  which  the  Company  operates.  These  estimates  can  be  significantly 
affected  by  future  changes  in  market  conditions,  the  economic  environment,  including  inflation,  and 

F-17 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

capital spending decisions of the Company’s customers. Any assessed impairments will be permanent and 
expensed  in  the  period  in  which  the  impairment  is  determined.  If  the  Company  determines  through  its 
assessment process that any of its goodwill requires impairment charges, the charges will be recorded in 
selling, general and administrative expenses in the consolidated statements of operations. 

The Company performed its annual review of impairment and did not recognize any impairment losses 
for the years ended December 31, 2007, 2006 and 2005.  

Intangible Assets – Intangible assets have been identified as assets with definite lives. The Company will 
amortize these assets over their established lives, generally 2-10  years. Additionally, the Company will 
test these assets with established lives for impairment if conditions exist that indicate that carrying values 
may  not  be  recoverable.  Possible  conditions  leading  to  the  unrecoverability  of  these  assets  include 
changes  in  market  conditions,  changes  in  future  economic  conditions  or  changes  in  technological 
feasibility that impact the Company’s assessments of future operations. If the Company determines that  
an  impairment  charge  is  needed,  the  charge  will  be  recorded  in  selling,  general  and  administrative 
expenses in the consolidated statements of operations. 

Revenue Recognition – The Company recognizes revenue when it is realized or realizable and earned. The 
Company  considers  revenue  realized  or  realizable  and  earned  when  it  has  persuasive  evidence  of  an 
arrangement, delivery has occurred, the sales price is fixed or determinable, and collection is reasonably 
assured in conformity with the Securities and Exchange Commission’s (“Commission”) Staff Accounting 
Bulletin (“SAB”) No. 104, Revenue Recognition.  

The  Company  derives  revenue  primarily  from  sales  of  ethanol  and  related  co-products.  The  Company 
recognizes  revenue  when  title  transfers  to  its  customers,  which  is  generally  upon  the  delivery  of  these 
products  to  a  customer’s  designated  location.  These  deliveries  are  made  in  accordance  with  sales 
commitments and related sales orders entered into with customers either verbally or in written form. The 
sales  commitments  and  related  sales  orders  provide  quantities,  pricing  and  conditions  of  sales.  In  this 
regard, the Company engages in three basic types of revenue generating transactions: 

• 

• 

• 

As a producer. Sales as a producer consist of sales of the Company’s inventory produced at 
its ethanol production facilities. 

As  a  merchant.  Sales  as  a  merchant  consist  of  sales  to  customers  through  purchases  from 
third-party  suppliers  in  which  the  Company  may  or  may  not  obtain  physical  control  of  the 
ethanol  or  co-products,  though  ultimately  titled  to  the  Company,  in  which  shipments  are 
directed  from  the  Company’s  suppliers  to  its  terminals  or  direct  to  its  customers  but  for 
which the Company accepts the risk of loss in the transactions. 

As an agent. Sales as an agent consist of sales to customers through purchases from third-
party  suppliers  in  which,  depending  upon  the  terms  of  the  transactions,  title  to  the  product 
may  technically  pass  to  the  Company,  but  the  risks  and  rewards  of  inventory  ownership 
remains  with  third-party  suppliers  as  the  Company  receives  a  predetermined  service  fee 
under these transactions and therefore acts predominantly in an agency capacity. When acting 
as an agent for third-party suppliers, the Company conducts back-to-back purchases and sales 
in  which  it  matches  ethanol  purchase  and  sales  contracts  of  like  quantities  and  delivery 
periods. 

The  Company  records  revenues  based  upon  the  gross  amounts  billed  to  its  customers  in  transactions 
where the Company acts as a producer or a merchant and obtains title to ethanol and its co-products and 

F-18 

  
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

therefore  owns  the  product  and  any  related,  unmitigated  inventory  risk  for  the  ethanol,  regardless  of 
whether the Company actually obtains physical control of the product.  

When the Company acts in an agency capacity, it records revenues based on the principles of Emerging 
Issues Task Force (“EITF”) Issue No. 99-19, Reporting Revenue Gross as a Principal Versus Net as an 
Agent. The Company recognizes revenue on a net basis or recognizes its predetermined agency fees only, 
based  upon  the  amount  of  net  revenues  retained in  excess  of  amounts  paid  to  suppliers.  Revenue  from 
sales of third-party ethanol and its co-products is recorded net of costs when the Company is acting as an 
agent between the customer and supplier and gross when the Company is a principal to the transaction. 
Several factors are considered to determine whether the Company is acting as an agent or principal, most 
notably whether the Company is the primary obligor to the customer, whether the Company has inventory 
risk  and  related  risk  of  loss.  Consideration  is  also  given  to  whether  the  Company  has  latitude  in 
establishing the sales price or has credit risk, or both. 

Stock-Based Compensation – On January 1, 2006, the Company adopted SFAS No. 123(R), Share-Based 
Payments. SFAS No. 123(R) requires a public entity to measure the cost of employee services received in 
exchange for the award of equity instruments based on the fair value of the award on the date of grant. 
The expense is to be recognized over the period during which an employee is required to provide services 
in exchange for the award. 

Derivative Instruments and Hedging Activities – Beginning in 2006, the Company implemented a policy 
to  minimize  its  exposure  to  commodity  price  risk  associated  with  certain  anticipated  commodity 
purchases  and  sales  and  interest  rate  risk  associated  with  anticipated  corporate  borrowings  by  using 
derivative  instruments. The  Company  accounts for  its  derivative  transactions in  accordance  with  SFAS 
No.  133,  Accounting  for  Derivative  Instruments  and  Hedging  Activities,  as  amended  and  interpreted. 
Derivative  transactions,  which  can  include  forward  contracts  and  futures  positions  on  the  New  York 
Mercantile Exchange and the Chicago Board of Trade and interest rate caps and swaps are recorded on 
the balance sheet as assets and liabilities based on the derivative’s fair value. Changes in the fair value of 
the derivative contracts are recognized currently in income unless specific hedge accounting criteria are 
met.  If  derivatives  meet  those  criteria,  effective  gains  and  losses  are  deferred  in  accumulated  other 
comprehensive  income  and  later  recorded  together  with  the  hedged  item  in  income.  For  derivatives 
designated  as  a  cash  flow  hedge,  the  Company  formally  documents  the  hedge  and  assesses  the 
effectiveness with associated transactions. The Company has designated and documented contracts for the 
physical  delivery  of  commodity  products  to  and  from  counterparties  as  normal  purchases  and  normal 
sales. 

Income  Taxes  –  Income  taxes  are  accounted  for  under  SFAS  No.  109,  Accounting  for  Income  Taxes. 
Under  SFAS  No.  109,  deferred  tax  assets  and  liabilities  are  determined  based  on  differences  between 
financial  reporting  and  tax  basis  of  assets  and  liabilities,  and  are  measured  using  enacted  tax  rates  and 
laws that are expected to be in effect when the differences reverse. Valuation allowances are established 
when necessary to reduce deferred tax assets to the amounts expected to be realized.  

Estimates and Assumptions – The preparation of the consolidated financial statements in conformity with 
accounting principles generally accepted in the United States requires management to make estimates and 
assumptions that affect the reported amounts of assets and liabilities and disclosure of contingent assets 
and liabilities at the date of the financial statements and the reported amounts of revenues and expenses 
during  the  reporting  period.  Significant  estimates  are  required  as  part  of  determining  allowance  for 
doubtful  accounts,  estimated  lives  of  property  and  equipment  and  intangibles,  goodwill  and  long-lived 
asset impairments, valuation allowances on deferred income taxes, and the potential outcome of future tax 
consequences of events recognized in the Company’s financial statements or tax returns. Actual results 
and outcomes may materially differ from management’s estimates and assumptions.  

F-19 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Reclassifications  –  Certain  prior  year  amounts  have  been  reclassified  to  conform  to  the  current 
presentation. Such reclassification had no effect on the net loss reported in the consolidated statements of 
operations.  

Recently  Issued  Accounting  Pronouncements  –  In  March  2008,  the  FASB  issued  SFAS  No.  161, 
Disclosure about Derivative Instruments and Hedging Activities, an amendment of FASB Statement No. 
133. SFAS No. 161 changes the disclosure requirements for derivative instruments and hedging activities. 
Entities  are  required  to  provide  enhanced  disclosures  about  (a)  how  and  why  an  entity  uses  derivative 
instruments, (b) how derivative instruments and related hedged items are accounted for under Statement 
No. 133 and its related interpretations and (c) how derivative instruments and related hedged items affect 
an  entity’s  financial  position,  financial  performance  and  cash  flows.  SFAS  No.  161  is  effective  for 
financial statements issued for fiscal years and interim periods beginning after November 15, 2008, with 
early application encouraged. The Company is currently evaluating the impact SFAS No. 161 may have 
on its consolidated financial statements. 

In  December  2007,  the  FASB  issued  SFAS  No.  141(R),  Business  Combinations.  SFAS  No.  141(R) 
retains  the  fundamental  requirements  in  SFAS  No.  141,  Business  Combinations,  that  the  acquisition 
method of accounting be used for all business combinations and for an acquirer to be identified for each 
business  combination.  SFAS  No.  141(R)  requires  an  acquirer  to  recognize  the  assets  acquired,  the 
liabilities  assumed,  and  any  noncontrolling  interest  in  the  acquiree  at  the  acquisition  date,  measured  at 
their fair values as of that date, with limited exceptions specified in SFAS No. 141(R). In addition, SFAS 
No.  141(R)  requires  acquisition  costs  and  restructuring  costs  that  the  acquirer  expected  but  was  not 
obligated to incur to be recognized separately from the business combination, therefore, expensed instead 
of  part  of  the  purchase  price  allocation.  SFAS  No.  141(R)  will  be  applied  prospectively  to  business 
combinations  for  which  the  acquisition  date  is  on  or  after  the  beginning  of  the  first  annual  reporting 
period beginning on or after December 15, 2008. Early adoption is prohibited. The Company expects to 
adopt  SFAS  No.  141(R)  to  any  business  combinations  with  an  acquisition  date  on  or  after  January  1, 
2009. 

In December 2007, the FASB issued SFAS No. 160, Noncontrolling Interests in Consolidated Financial 
Statements,  an  amendment  to  ARB  No.  51.  SFAS  No.  160  changes  the  accounting  and  reporting  for 
minority interests, which will be recharacterized as noncontrolling interests and classified as a component 
of  equity.  SFAS  No.  160  is  effective  for  fiscal  years,  and  interim  periods  within  those  fiscal  years, 
beginning  on  or  after  December  15,  2008.  Early  adoption  is  prohibited.  The  Company  is  currently 
evaluating the impact SFAS No. 160 may have on its consolidated financial statements. 

In  February  2007,  the  FASB  issued  SFAS  No.  159,  The  Fair  Value  Option  for  Financial  Assets  and 
Financial  Liabilities.  SFAS  No.  159  permits  an  entity  to  irrevocably  elect  fair  value  on  a  contract-by-
contract basis as the initial and subsequent measurement attribute for many financial assets and liabilities 
and  certain  other  items  including  insurance  contracts.  Entities  electing  the  fair  value  option  would  be 
required to recognize  changes  in fair  value  in  earnings and to expense upfront cost and fees associated 
with  the  item  for  which  the  fair  value  option  is  elected.  SFAS  No.  159  is  effective  for  fiscal  years 
beginning after November 15, 2007. Early adoption is permitted as of the beginning of a fiscal year that 
begins on or before November 15, 2007, provided the entity also elects to apply the provisions of SFAS 
No. 157, Fair Value Measurements. The Company does not expect the adoption of SFAS No. 159 to have 
a material impact on its financial condition or results of operations. 

In September 2006, the FASB issued SFAS No. 157. SFAS No. 157 provides a single definition of fair 
value, together with a framework for measuring it, and requires additional disclosure about the use of fair 
value to measure assets and liabilities. SFAS No. 157 also emphasizes that fair value is a market-based 
measurement,  not  an  entity-specific  measurement,  and  sets  out  a  fair  value  hierarchy  with  the  highest 

F-20 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

priority being quoted prices in active markets. The original required effective date of SFAS No. 157 for 
the  Company  was  the  first  quarter  of  2008,  however,  the  FASB  issued  FASB  Staff  Position  157-2, 
Effective  Date  of  FASB  Statement  No.  157,  which  deferred  the  adoption  date  by  one  year  for  all 
nonfinancial  assets  and  nonfinancial  liabilities.  The  Company  is  currently  evaluating  the  impact  SFAS 
No. 157 may have on its consolidated financial statements.  

2.  BUSINESS COMBINATIONS. 

Acquisition of Interest in Front Range – On October 17, 2006, the Company entered into a Membership 
Interest Purchase Agreement with Eagle Energy to acquire Eagle Energy’s 42% interest in Front Range. 
Front Range was formed on July 29, 2004 to construct and operate a 50 million gallon dry mill ethanol 
plant in Windsor, Colorado. Front Range began producing ethanol in June 2006.  

As  consideration  for  the  acquisition  of  Eagle  Energy’s  interest  in  Front  Range,  the  Company  paid  to 
Eagle Energy $30,000,000 in cash, 2,081,888 shares of common stock valued at $30,008,000 under the 
valuation provisions of the agreement and a warrant to purchase up to 693,963 shares of common stock at 
an  exercise  price  of  $14.41  per  share.  The  warrant  expired  unexercised  on  October  17,  2007.  The 
Company utilized EITF Issue No. 99-12, Determination of the Measurement Date for the Market Price of 
Acquirer  Securities  Issued  in  a  Purchase  Business  Combination,  to  establish  the  market  price  of  the 
securities issued in the transaction where the measurement date was determined to be the date at which 
the number of acquirer shares and the amount of consideration becomes fixed and determinable without 
subsequent revision. In the transaction, the measurement date on which the shares to be issued became 
fixed  and  determinable  was  October  17,  2006  and  the  common  stock  valuation  price  was  $14.41  per 
share,  pursuant  to  the  terms  of  the  Front  Range  acquisition  agreement,  whereby  the  10-day  volume-
weighted-average trading price prior to closing was used in determining the number of exercisable shares 
in  the  warrant.  Using  the  Black-Scholes  option-pricing  model,  the  value  of  this  warrant  on  the 
measurement  date  was  $5,087,000.  The  total  value  of  the  consideration  paid  to  Eagle  Energy  was 
$65,095,000.  The  Company  incurred,  and  has  capitalized,  transaction  costs  associated  with  this 
acquisition  of  $517,000.  The  following  summarizes  the  Company’s  estimated  fair  values  of  the  Front 
Range tangible and intangible assets and liabilities acquired, which have been revised for activity in 2007 
as discussed in Note 6 (in thousands):  

Total Current Assets 
Property and Equipment 
Other Assets 
Intangible Assets: 

Customer backlogs 
Non-compete covenants 
Goodwill 

Total Intangible Assets 

Total Assets 

Total Current Liabilities 
Long Term Debt 
Total Liabilities 
Noncontrolling interest in variable interest entity 
Net Assets 

Cash issued to Eagle Energy 
Stock issued to Eagle Energy 
Value of warrant issued to Eagle Energy 
Acquisition expenses 
Transaction value 

F-21 

$          15,090 
92,376 
584 

3,900 
400 
83,468 
87,768 
195,818 

(10,847) 
(28,753) 
(39,600) 
(90,606) 
$          65,612 

$          30,000 
30,008 
5,087 
517 
$          65,612 

  
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Prior  to  the  Company’s  acquisition  of  its  ownership  interest  in  Front  Range,  the  Company,  directly  or 
through one of its subsidiaries, had entered into four marketing and management agreements with Front 
Range.  

The Company entered into a marketing agreement with Front Range on August 19, 2005 that provided the 
Company  with  the  exclusive  right  to  act  as  an  agent  to  market  and  sell  all  of  Front  Range’s  ethanol 
production.  The  marketing  agreement  was  amended  on  August  9,  2006  to  extend  the  Company’s 
relationship  with  Front  Range  to  allow  the  Company  to  act  as  a  merchant  under  the  agreement.  The 
marketing  agreement  was  amended  again  on  October  17,  2006  to  provide  for  a  term  of  six  and  a  half 
years with provisions for annual automatic renewal thereafter.  

The  Company  entered  into  a  grain  supply  agreement  with  Front  Range  on  August  20,  2005  (amended 
October 17, 2006) under which the Company is to negotiate on behalf of Front Range all grain purchase, 
procurement and transport contracts. The Company is to receive a $1.00 per ton fee related to this service. 
The  grain  supply  agreement  has  a  term  of  two  and  a  half  years  with  provisions  for  annual  automatic 
renewal thereafter.  

The Company entered into a WDG marketing and services agreement with Front Range on August 19, 
2005 (amended October 17, 2006) that provided the Company with the exclusive right to market and sell 
all of Front Range’s WDG production. The Company is to receive the greater of a 5% fee of the amount 
sold or $2.00 per ton. The WDG  marketing and services agreement has a term of two and a half years 
with provisions for annual automatic renewal thereafter.  

The Company entered into a management agreement with Front Range on August 30, 2005 under which 
the Company is to provide management services to Front Range relating to construction management and 
operational  support. These  services are  advisory  in  nature  as  Front  Range  management  retains ultimate 
decision making authority. The Company is to receive an annual management fee of $150,000 under this 
agreement.  The  management  agreement  has  a term  of  three  years  with  provisions  for  annual automatic 
renewal thereafter. This agreement was terminated by mutual agreement on February 28, 2007. 

The  Company’s  acquisition  of  its  ownership  interest  in  Front  Range  does  not  impact  the  Company’s 
rights or obligations under any of these agreements. 

Share Exchange Transaction – On March 23, 2005, the shareholders of PEI California and the holders of 
the membership interests of each of Kinergy and ReEnergy, completed the Share Exchange Transaction. 
The Share Exchange Transaction has been accounted for as a reverse acquisition whereby PEI California 
is deemed to be the accounting acquiror. 

The following table summarizes the assets acquired and liabilities assumed in connection with the Share 
Exchange Transaction (in thousands):  

F-22 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Accessity 
March 23, 2005 

Kinergy 
March 23, 2005 

ReEnergy 
March 23, 2005 

Total 

Total Current Assets 

$          2,870 

$         3,861 

$              3 

$      6,734 

Property and Equipment 
Other Assets - Land option 
Total Intangible Assets (Note 6) 

Total Assets 
Total Current Liabilities 

— 
— 
— 

2,870 
(222) 

7 
— 
10,816 

14,684 
(3,868) 

Net Assets 

$ 

2,648 

$ 

10,816 

$ 

— 
120 
— 

123 
(3) 

120 

7 
120 
10,816 

17,677 
(4,093) 

$13,584 

Expense for services rendered in 

connection with feasibility study 

$ 

— 

$ 

— 

$ 

852 

$ 

852 

Stock Issued 
Stock issued to Accessity officers 
Stock Issued as finders fee 
  Total Stock Issued 

2,339 
600 
150 
3,089 

3,875 
— 
— 
3,875 

125 
— 
— 
125 

6,339 
600 
150 
7,089 

Reverse  Acquisition  –  Immediately  prior  to  the  consummation  of  the  Share  Exchange  Transaction, 
Accessity reincorporated in the State of Delaware under the name “Pacific Ethanol, Inc” through a merger 
of Accessity with and into its then-wholly-owned Delaware subsidiary named Pacific Ethanol, Inc., which 
was  formed  for  the  purpose  of  effecting  the  Reincorporation  Merger.  In  connection  with  the 
Reincorporation  Merger,  the  shareholders  of  Accessity  became  stockholders  of  the  Company  and  the 
Company succeeded to the rights, properties and assets and assumed the liabilities of Accessity. 

In addition, Accessity divested its two operating subsidiaries. Accordingly, effective as of the closing of 
the  Share  Exchange  Transaction,  Accessity  did  not  have  any  ongoing  business  operations.  Assets 
consisting primarily of cash and cash equivalents totaling $2,870,000 were acquired and certain current 
liabilities of $222,000 were assumed from Accessity. Because Accessity had no operations and only net 
monetary assets, the Share Exchange Transaction is being treated as a capital transaction, whereby PEI 
California  acquired  the  net  monetary  assets  of  Accessity,  accompanied  by  a  recapitalization  of  PEI 
California. As such, no fair value adjustments were necessary for any of the assets acquired or liabilities 
assumed. 

The  former  shareholders  of  Accessity,  who  collectively  held  2,339,452  shares  of  common  stock  of 
Accessity, became the stockholders of an equal number of shares of common stock of the Company and 
holders of options and warrants to acquire shares of common stock of Accessity, who collectively held 
options and warrants to acquire 402,667 shares of common stock of Accessity, became holders of options 
and warrants to acquire an equal number of shares of common stock of the Company. 

In connection with the reverse acquisition, the Company issued to Accessity’s and the Company’s former 
Chairman  of  the  Board,  President  and  Chief  Executive  Officer,  400,000  shares  of  the  Company’s 
common  stock  in  consideration  of  his  obligations  under  a  Confidentiality,  Non-Competition,  Non-
Solicitation and  Consulting  Agreement  that  was  entered  into  with the  Company  in  connection  with the 
Share Exchange Transaction. These shares, valued at $1,012,000, are accounted for as transaction costs of 
the reverse acquisition. 

F-23 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

In connection with the reverse acquisition, the Company issued to Accessity’s and the Company’s former 
Senior Vice President, Secretary, Treasurer and Chief Financial Officer, 200,000 shares of the Company’s 
common  stock  in  consideration  of  his  obligations  under  a  Confidentiality,  Non-Competition,  Non-
Solicitation and  Consulting  Agreement  that  was  entered  into  with the  Company  in  connection  with the 
Share Exchange Transaction. These shares, valued at $506,000, are accounted for as transaction costs of 
the reverse acquisition. 

On March 23, 2005, the Company issued 150,000 shares of common stock to an independent contractor 
for services rendered by her as a finder in connection with the Share Exchange Transaction. These shares, 
valued at $380,000, are accounted for as transaction costs of the reverse acquisition. 

Immediately  prior  to  the  closing  of  the  Share  Exchange  Transaction,  certain  shareholders  of  PEI 
California sold an aggregate of 250,000 shares of PEI California’s common stock owned by them to the 
then-Chief  Executive  Officer  of  Accessity  at  $0.01  per  share  to  compensate  him  for  facilitating  the 
closing  of  the  Share  Exchange  Transaction.  These  shares,  valued  at  $633,000,  are  accounted  for  as 
transaction costs of the reverse acquisition. 

In  addition to  the  value  of  the  shares  transferred  as discussed  above  totaling  $2,530,000, the  Company 
incurred  $821,000  in  legal  fees,  finder’s  fees  and  valuation  services  in  connection  with  the  reverse 
acquisition, resulting in total transaction costs of $3,351,000. The Company has recorded an expense with 
a  corresponding  increase  in  paid  in  capital  in  the  amount  of  $481,000  for  transaction  costs  incurred  in 
excess of the cash acquired from Accessity. 

Kinergy  Acquisition  –  In  connection  with  the  Share  Exchange  Transaction,  the  Company  issued 
3,875,000 shares of common stock to the sole limited liability company  member of Kinergy to acquire 
Kinergy. This stock was valued at $9,804,000. 

Immediately  prior  to  the  closing  of  the  Share  Exchange  Transaction,  the  Chairman  of  the  Board  of 
Directors of the Company and PEI California sold 300,000 shares of PEI California’s common stock to 
the sole member of Kinergy and an officer and director of the Company and PEI California, at $0.01 per 
share to compensate him for facilitating the closing of the Share Exchange Transaction. The transfer of 
these shares resulted in additional purchase price of $759,000. 

Immediately  prior  to  the  closing  of  the  Share  Exchange  Transaction,  the  Chairman  of  the  Board  of 
Directors of the Company and PEI California sold 100,000 shares of PEI California’s common stock to a 
member of ReEnergy and a related party of the sole member of Kinergy, at $0.01 per share to compensate 
him for facilitating the closing of the Share Exchange Transaction. The transfer of these shares resulted in 
additional purchase price of $253,000. 

The transfer of these shares increased the purchase price by $1,012,000 resulting in a total purchase price 
for Kinergy of $10,816,000.  

Pursuant to the terms of the Share Exchange Transaction, Kinergy distributed to its sole member in the 
form  of  a promissory  note  in the amount  of $2,096,000,  Kinergy’s  net  worth  as  set  forth  on Kinergy’s 
balance  sheet  prepared  in  accordance  with  generally  accepted  accounting  principles,  as  of  March  23, 
2005. As a result, there was no value to the net assets acquired, resulting in a significant premium paid to 
acquire Kinergy. In deciding to pay this premium, the Company considered various factors, including the 
value  of  Kinergy’s  trade  name,  Kinergy’s  extensive  market  presence  and  history,  Kinergy’s  industry 
knowledge  and  expertise,  Kinergy’s  extensive  customer  relationships  and  expected  synergies  among 
Kinergy’s businesses and assets and the Company’s planned entry into the ethanol production business. 
The purchase price has been allocated as follows (in thousands): 

F-24 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

March 23, 2005 

Backlog 
Customer relationships 
Non-compete 
Kinergy trade name 
Goodwill (Note 11) 

$ 

136 
4,741 
695 
2,678 
2,566 

Total assets acquired 

$  10,816 

The Company has determined that the Kinergy trade name has an indefinite life and therefore, rather than 
being amortized, it will be periodically tested for impairment. The distribution backlog had an estimated 
life of six months, the customer relationships were estimated to have a ten-year life and the non-compete 
had  an  estimated  life  of  three  years  and,  as  a  result,  will  be  amortized  accordingly,  unless  otherwise 
impaired at an earlier time. 

ReEnergy Acquisition – The Company made a $150,000 cash payment and issued 125,000 shares of stock 
valued at $316,000 for the acquisition of ReEnergy. In addition, immediately prior to the closing of the 
Share Exchange Transaction, the Company’s and PEI California’s Chairman of the Board of Directors, 
sold 200,000 shares of PEI California’s common stock to the individual members of ReEnergy at $0.01 
per  share,  to  compensate  them  for  facilitating  the  closing  of  the  Share  Exchange  Transaction.  The 
contribution  of  these  shares  increased  the  purchase  price  by  $506,000  for  a  total  of  $972,000.  Of  this 
amount, $120,000 was recorded as an asset for an option to acquire land and because the acquisition of 
ReEnergy was not deemed to be an acquisition of a business, the remaining purchase price of $852,000 
was recorded as an expense for services rendered in connection with a feasibility study. Upon expiration 
of ReEnergy’s option on December 15, 2005, the Company expensed the $120,000 asset associated with 
the fair value of the option. 

The following table summarizes, on an unaudited pro forma basis, the combined results of operations of 
the Company, as though the acquisitions of Kinergy and Front Range occurred as of January 1, 2005. The 
pro forma amounts give effect to appropriate adjustments for amortization of intangible assets and income 
taxes.  The  pro  forma  amounts  presented  are  not  necessarily  indicative  of  future  operating  results  (in 
thousands, except per share data): 

Net sales 
Net income (loss) 
Preferred stock dividends 
Deemed dividend on preferred stock 
Loss available to common 

stockholders 

Basic  loss  per  share  of  common 

stock 
___________ 

December 31,  

2006 

2005(1) 

$ 
$ 
$ 

244,046 
7,026 
(2,998) 
(84,000) 

$ 
$ 
$ 

111,187 
(13,095) 
— 
— 

(79,972) 

(13,095) 

$ 

(2.30) 

$ 

(0.52) 

(1) Front  Range’s  ethanol  production  facility  became  operational  in  June  2006  and 
accordingly, no sales revenues and only administrative expenses were incurred during 
2005. 

F-25 

  
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

3.  INVESTMENTS IN MARKETABLE SECURITIES. 

The cost, gross unrealized gains (losses) and fair value of the available-for-sale securities by security type 
are as follows (in thousands):  

Gross 
Unrealized 
Gains  

Gross 
Unrealized 
(Losses)  

Cost  

Fair Value 

As of December 31, 2007: 
Available-for-sale: 

Short-term marketable securities 
Total marketable securities 

$        19,353 
19,353 
$ 

$          — 
— 
$ 

As of December 31, 2006: 
Available-for-sale: 

U.S. Treasury securities 
Other short-term marketable 

securities 

Total marketable securities 

$ 

27,651 

$ 

349 

11,119 
38,770 

— 
349 

$ 

$ 

$ 
$ 

$ 

$ 

— 
— 

$        19,353 
19,353 
$ 

— 

— 
— 

$ 

28,000 

11,119 
39,119 

$ 

4.  RELATED PARTY NOTES RECEIVABLE. 

On December 30, 2005, an employee was advanced $40,000 at 5% interest, due and payable on or before 
June 30, 2006, to cover withholding taxes due on reportable gross taxable income related to a stock grant 
of 25,000 shares on June 23, 2005. The loan was repaid in full on June 20, 2006. 

On December 30, 2005, an employee was advanced $96,000 at 5% interest, due and payable on or before 
June 30, 2006, to cover withholding taxes due on reportable gross taxable income related to a stock grant 
of 45,000 shares on June 23, 2005. The loan was repaid in full on June 29, 2006. 

5.  PROPERTY AND EQUIPMENT. 

Property and equipment consisted of the following (in thousands): 

Land 
Water rights – capital lease 
Facilities 
Equipment and vehicles 
Office furniture, fixtures and equipment 
Construction in progress 

Accumulated depreciation 

December 31, 

2007 

5,848 
1,613 
71,383 
192,045 
2,510 
213,157 
486,556 
(17,852) 
468,704 

  $ 

  $ 

2006 

4,350 
1,613 
43,928 
125,489 
1,368 
23,612 
200,360 
(4,204) 
196,156 

$ 

$ 

As of December 31, 2007, the Company had completed construction of two ethanol production facilities 
in  Madera,  California  and  Boardman,  Oregon,  which  were  completed  in  October  2006  and  September 
2007, respectively. Additionally, the Company is continuing construction on two additional facilities in 
Burley,  Idaho  and  Stockton,  California,  which  had  a  balance  of  $91,150,000  and  $74,012,000  of 

F-26 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

construction  in  progress  costs,  respectively,  as  of  December  31,  2007.  The  Burley,  Idaho  facility  is 
expected to be completed in the second quarter of 2008, with estimated additional costs to be capitalized 
of $12,687,000. The Stockton, California facility is expected to be completed in the third quarter of 2008, 
with estimated additional costs to be capitalized of $47,843,000. Although the Company has suspended 
construction  of  its  Imperial  Valley,  California  facility,  approximately  $32,636,000  remains  in 
construction in progress as of December 31, 2007.  

Included  in  construction  in  progress  at  December  31,  2007  and  2006  was  capitalized  interest  of 
$5,961,000 and $0, respectively. Depreciation expense was $13,682,000, $2,284,000 and $85,000 for the 
years ended December 31, 2007, 2006 and 2005, respectively. 

6.  GOODWILL AND OTHER INTANGIBLE ASSETS. 

The table below represents the net balances for goodwill and intangible assets (in thousands): 

Useful 
Life 
(Years) 

Gross 

December 31, 2007 
Accumulated 
Amortization/ 
Impairment 

Net Book 
Value 

Gross 

December 31, 2006 
Accumulated 
Amortization/ 
Impairment 

Net Book 
Value 

$ 

88,168  $ 
2,678 

$ 

— 
— 

88,168  $ 
2,678 

85,307 $ 
2,678

—  $ 
— 

85,307 
2,678 

10 
2-3 
<1 

4,741 
1,095 
4,036 

1,314 
876 
4,036 

3,427 
219 
— 

4,741
1,095
4,036

840 
444 
1,111 

3,901 
651 
2,925 

$ 

100,718  $ 

6,226 

$ 

94,492  $ 

97,857 $ 

2,395  $ 

95,462 

Non-Amortizing: 

Goodwill recognized in 

business combinations 
Trademarks, brand names 

Amortizing: 

Customer relationships 
Non-compete covenants 
Customer backlogs 

Total goodwill and 
intangible assets 

Goodwill – The Company recorded goodwill of $2,566,000 as part of the Share Exchange Transaction. 
The  Company  originally  recorded  goodwill  of  $80,607,000  as  part  of  the  Company’s  purchase  of 
ownership  interests  in  Front  Range  for  the  year  ended  December  31,  2006.  During  the  year  ended 
December 31, 2007, the Company adjusted the purchase price allocation, increasing goodwill and accrued 
liabilities in the aggregate amount of $2,861,000, due to recognition of additional liabilities that existed at 
the time of the acquisition.  

Trademarks  –  The  Company  recorded  trademarks  of  $2,678,000  as  part  of  the  Share  Exchange 
Transaction for the year ended December 31, 2005. The Company determined that the trademarks have an 
indefinite life and therefore, rather than being amortized, will, along with the recorded goodwill, be tested 
annually for impairment.  

Customer  Relationships  –  The  Company  recorded  customer  relationships  of  $4,741,000  as  part  of  the 
Share Exchange Transaction. The Company has established a useful life of ten years for these customer 
relationships.  

Non-Compete  Covenants  –  The  Company  recorded  non-compete  covenants  of  $400,000  as  part  of  the 
Company’s purchase of ownership interest in Front Range and $695,000 as part of the Share Exchange 
Transaction. The Company has established estimated useful lives of two and three years, respectively, for 
these non-compete covenants. 

Customer Backlogs – The Company recorded customer backlogs of $3,900,000 as part of the Company’s 
purchase  of  its  ownership  interest  in  Front  Range  and  $136,000  as  part  of  the  Share  Exchange 

F-27 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Transaction. The Company had established estimated useful lives of eight and six months, respectively, 
for these customer backlogs. 

Amortization expense associated with intangible assets totaled $3,831,000, $1,714,000 and $681,000 for 
the  years  ended  December 31,  2007,  2006  and  2005,  respectively.  The  weighted-average  unamortized 
lives of the amortizing intangible assets are 7.2 and 0.7 years for customer relationships and non-compete 
covenants, respectively.  

The expected amortization expense relating to amortizable intangible assets in each of the five years after 
December 31, 2007, are (in thousands): 

Years Ended 
December 31, 
2008 
2009 
2010 
2011 
2012 
Thereafter 
     Total 

Amount 
$               693 
474 
474 
474 

        474     
1,057 
$            3,646 

7.  SHORT-TERM NOTE PAYABLE. 

In November 2007, the Company issued an unsecured note payable for $6,000,000 to finance short-term 
cash needs related to its plant construction activities. This note was for final construction costs related to 
its Boardman facility and did not result in any cash proceeds to the Company. The note requires monthly 
principal payments of $500,000 and accrued interest. The remaining balance is due in full on December 
15, 2008. The note bears interest at the Prime Rate. 

8.  LINE OF CREDIT. 

The  Company  has  a  line  of  credit  of  $3,500,000  with  a  commercial  bank  to  support  working  capital, 
specifically inventories and accounts receivable. The line of credit expires November 25, 2008 and bears 
interest  at  a  rate  equal  to  the  30-day  London  Interbank  Offered  Rate  (“LIBOR”)  plus  3.50%.  As  of 
December  31,  2007,  the interest  rate  was  8.1%. The line of  credit is  secured  by  substantially  all  of the 
assets of Front Range. There was no outstanding balance on this line of credit as of December 31, 2007.  

F-28 

  
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

9.  DEBT 

Long-term borrowings are summarized in the table below (in thousands): 

Plant construction term loans, due 2015 
Plant construction lines of credit, due 2009 
Operating line of credit, due 2009 
Notes payable, due 2009 
Swap note, due 2011 
Variable rate note, due 2011 
Long-term revolving note 

    Water rights capital lease obligations 

Less short-term portion 
Long-term debt 

Plant Construction Term Loans & Lines of Credit 

December 31,  

2007 

2006 

$                92,308  $                    —      

9,200 
6,217 
30,000 
16,370 
6,930 
— 
1,261 

— 
— 
— 
17,658 
12,607 
1,617 
1,213 

162,286 
(11,098) 

  33,095 
(4,125) 
$              151,188  $          28,970 

On February 27, 2007, the Company closed a debt financing transaction in the aggregate amount of up to 
$325,000,000 through  certain of its  wholly-owned  indirect  subsidiaries (the  “Borrowers”). The  primary 
purpose of the debt financing (the “Debt Financing”) was to provide debt financing for the development, 
construction, installation, engineering, procurement, design, testing, start-up, operation and maintenance 
of  five  ethanol  production  facilities.  On  November  27,  2007,  the  Company  amended  the  agreement  to 
apply to four ethanol production facilities, thereby reducing the aggregate amount of available financing 
to  up  to  $250,769,000.  As  of  December  31,  2007,  two  of  the  four  plants  have  been  funded,  with  the 
remaining two expected to be funded in 2008. As of December 31, 2007, the outstanding balance under 
the Debt Financing was $101,508,000, comprised of $92,308,000 in construction loans and $9,200,000 in 
used lines of credit.  

The Debt Financing, as amended, includes:  

• 

• 

• 

four construction loan facilities in an aggregate amount of up to $230,800,000. Loans made under 
the construction loan facilities do not amortize, but require payment of accrued interest, and are 
fully due and payable on the earlier of October 27, 2008 or the date the construction loans made 
thereunder are converted into term loans (the “Conversion Date”), the latter of which is to be the 
date  the  last  of  the  four  plants  achieves  commercial  operations.  On  the  Conversion  Date,  the 
construction loans are to be converted into term loans;  
four  term  loan  facilities  in  an  aggregate  amount  of  up  to  $230,800,000,  which  are  intended  to 
refinance the loans made under the construction loan facilities. The term loans are to be repaid 
ratably by each Borrower on a quarterly basis from and after the Conversion Date in an amount 
equal  to  1.5%  of  the  aggregate  original  principal  amount  of  the  corresponding  term  loan.  The 
remaining principal balance and all accrued and unpaid interest on the term loans are fully due 
and payable on the date that is 84 months after the Conversion Date; and 
a  working  capital  and  letter  of  credit  facility  in  an  aggregate  amount  of  up  to  $20,000,000 
($5,000,000  per  facility)  that  is  fully  due  and  payable  on  the  date  that  is  12  months  after  the 
Conversion Date, but is expected to be renewed on similar terms and conditions. During the term 

F-29 

  
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

of  the  working  capital  and  letter  of  credit  facility,  the  Borrowers  may  borrow,  repay  and  re-
borrow amounts available under the facility.  

Loans and letters of credit under the Debt Financing are subject to conditions precedent, including, among 
others, the absence of a material adverse effect; the absence of defaults or events of defaults; the accuracy 
of certain representations and warranties; the maintenance of a debt-to-equity ratio that is not in excess of 
65:35; the contribution of all required equity by the Company to the Borrowers, which is expected to be 
approximately  $227,000,000  in  the  aggregate;  and  the  attainment  of  at  least  a  1.5-to-1.0  debt  service 
coverage ratio. Also, the Borrowers may not be able to fully utilize the Debt Financing if the completed 
ethanol plants fail to meet certain minimum performance standards. Loans made under the construction 
and term loan facilities may not be re-borrowed once repaid or re-borrowed once prepaid. Finally, loan 
amounts under the construction and term loan facilities are limited to a percentage of project costs of the 
corresponding plant but are not to exceed approximately $1.15 per gallon of annual production capacity 
of the plant.  

The Borrowers have the option to select from multiple interest rates that float with common interest rate 
indices,  such  as  the  LIBOR,  with  reset  periods  of  differing  durations.  Depending  upon  the  floating 
interest rate selected, the type of loan and whether the loan is made under a construction loan facility, a 
term loan facility or the working capital and letter of credit facility, loans under the Debt Financing bear 
interest at rates ranging from 3.75% to 4.35% over the selected interest rate index. 

In  addition  to  scheduled  principal  payments,  starting  after the  Conversion  Date,  the term  loan facilities 
require  mandatory  repayments  of  principal  in  amounts  based  on  the  Borrowers’  free  cash  flow.  The 
percentage of the Borrowers’ free cash flow to be applied to principal repayments is to vary from 50% in 
the first two years following the Conversion Date to 75-100% in succeeding years, based upon repayment 
amounts measured against targeted balances. 

Borrowings  and  the  Borrowers’  obligations  under  the  Debt  Financing  are  secured  by  a  first-priority 
security  interest  in  all  of  the  equity  interests  in  the  Borrowers  and  substantially  all  the  assets  of  the 
Borrowers. The security interests granted by the Borrowers under the Debt Financing restrict the assets 
and  revenues  of  the  Borrowers  and  therefore  may  inhibit  the  Company’s  ability  to  obtain  other  debt 
financing.  

installation,  engineering,  procurement,  design, 

In  connection  with  the  Debt  Financing,  the  Company  also  entered  into  a  Sponsor  Support  Agreement 
under  which  the  Company  is  to  provide  limited  contingent  equity  support  in  connection  with  the 
development,  construction, 
testing,  start-up  and 
maintenance of the four ethanol production facilities. In particular, the Company has agreed to contribute 
to  the  Borrowers  up  to  an  aggregate  of  approximately  $28,083,000  (the  “Sponsor  Funding  Cap”)  of 
contingent equity in the event the Borrowers have insufficient funds to either pay their project costs as 
they become due and payable or, by delay in payment, cause the ethanol production facilities to fail to be 
completed  by  the  Conversion  Date. The  Company  has  agreed to  provide  a  warranty  with respect  to all 
ethanol plants other than its Madera facility, which is under standard warranty through the contractor. The 
warranty  obligations  of  the  Company  with  respect  to  the  other  three  facilities  extend  one  year  beyond 
final  completion  of  each  facility.  The  warranty  obligation  will  cease  one  year  from  the  date  the  third 
ethanol plant achieves final completion. The Company’s obligations under the warranty are capped at the 
Sponsor Funding Cap. Until the Company’s contingent equity obligations have been fully performed or 
the  warranty  period  has  expired,  the  Company  may  not  incur  any  secured  indebtedness  for  borrowed 
money,  grant liens on its assets or provide any secured credit enhancements in an aggregate amount in 
excess of $10,000,000 unless the Company provides the lenders under the Debt Financing with the same 
liens or credit support.  

F-30 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

The  Company  incurred  $11,048,000  of  costs  associated  with  the  completion  of  the  Debt  Financing 
arrangement and has capitalized these costs in other assets, except the portion amortizing during the next 
twelve months, which is classified in other current assets. In connection with the amendment discussed 
above, the Company recognized a write-off of the corresponding facility’s related unamortized financing 
costs  of  approximately  $1,962,000  for  the  year  ended  December  31,  2007.  For  the  other  facilities,  the 
Company  recognized  amortization  of  financing  costs  of  approximately  $2,764,000  for  the  year  ended 
December 31, 2007. The remaining unamortized financing costs continue to be amortized over a six-year 
life.  

In  March  2008,  the  Company  became  aware  of  various  events  or  circumstances  which  constituted 
defaults under its Credit Agreement. (See Note 9.)  These events or circumstances included the existence 
of  material  weaknesses  in  the  Company’s  internal  control  over  financial  reporting  as  of  December  31, 
2007,  cash  management  activities  that  violated  covenants  in  its  Credit  Agreement,  failure  to  maintain 
adequate amounts in a designated debt service reserve account, the existence of a number of Eurodollar 
loans  in  excess  of  the  maximum  number  permitted  under  the  Company’s  Credit  Agreement,  and  the 
Company’s  failure  to  pay  all  remaining  project  costs  on  its  Madera  and  Boardman  facilities  by  certain 
stipulated  deadlines.  On  March  26,  2008,  the  Company  obtained  waivers  from  its  lenders  as  to  these 
defaults and was required to pay the lenders a consent fee in an aggregate amount of up to approximately 
$600,000.    In  addition  to  the  waivers,  the  Company’s  lenders  agreed  to  amend  the  Credit  Agreement. 
These  amendments  include  an  increase  in  the  frequency  with  which  the  Company  is  to  deposit  certain 
revenues  into  a  restricted  account  each  month,  an  increase  the  allowable  Eurodollar  loans  from  a 
maximum of seven to a maximum of ten, and the Company is required to pay all remaining project costs 
on its Madera and Boardman facilities by May 16, 2008.  

Operating Line of Credit 

In addition to the Debt Financing, in August 2007, a subsidiary of the Company entered into an operating 
line  of  credit  facility  that  allows  for  borrowings  not  to  exceed  the lesser  of  $25,000,000  or  the  sum  of 
80% of eligible accounts receivable and 70% of eligible inventory of the subsidiary. Advances under the 
operating  line  of  credit  bear  interest  at  spreads  typical  in  the  industry  for  this  type  of  financing  over 
standard  indices,  such  as  the  prime  rate  and/or  LIBOR.  Interest  payments  are  due  monthly  or  at  the 
applicable LIBOR period. As of December 31, 2007, the outstanding balance under the line of credit was 
$6,217,000 and accrues interest at two separate variable interest rates ranging from 6.19% to 6.75%. The 
line  of  credit  expires  in  July  2009,  at  which  time  the  outstanding  balance  becomes  due  and  payable. 
Borrowings under the line of credit are secured by substantially all of the assets of the subsidiary and are 
also secured by a limited guaranty by the Company. Under the terms of the line of credit, the subsidiary is 
required  to  maintain  certain  financial  and  non-financial  covenants.  The  financial  covenants  became 
effective  beginning  with  the  three  months  ended  December  31,  2007.  The  Company  believes  that  the 
subsidiary is in compliance with the covenants as of December 31, 2007.  

Notes Payable 

In  November  2007,  Pacific  Ethanol  Imperial,  LLC  (“PEI  Imperial”),  an  indirect  subsidiary  of  the 
Company, borrowed $15,000,000 from Lyles United, LLC under a Secured Promissory Note containing 
customary terms and conditions. The loan accrues interest at a rate equal to the Prime Rate of interest as 
reported from time to time in The Wall Street Journal, plus two percent (2.00%), computed on the basis 
of a 360-day year of twelve 30-day months. The loan was due 90-days after issuance or, if extended at the 
option  of  PEI  Imperial,  365-days  after  the  end  of  such  90-day  period.  This  loan  was  extended  by  PEI 
Imperial  and  is  due  February  25,  2009.  The  Secured  Promissory  Note  provided  that  if  the  loan  was 
extended,  the  Company  was  to  issue  a  warrant  to  purchase  100,000  shares  of  the  Company’s  common 
stock at an exercise price of $8.00 per share. The Company is to issue this warrant simultaneously with 

F-31 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

the closing of the transactions contemplated by the Purchase Agreement, or alternatively, not later than 
April 30, 2008. The warrant will be exercisable at any time during the 18-month period after the date of 
issuance.  The  loan  is  secured  by  substantially  all  of  the  assets  of  PEI  Imperial  pursuant  to  a  Security 
Agreement dated November 28, 2007 by and between PEI Imperial and Lyles United, LLC that contains 
customary  terms  and  conditions  and  an  Amendment  No.  1  to  Security  Agreement  dated  December  27, 
2007 by and between PEI Imperial and Lyles United, LLC (collectively, the “Security Agreement”). The 
Company  has  guaranteed  the  repayment  of  the  loan  pursuant  to  an  Unconditional  Guaranty  dated 
November 28, 2007 containing customary terms and conditions. In connection with the loan, PEI Imperial 
entered  into  a  Letter  Agreement  dated  November  28,  2007  with  Lyles  United,  LLC  under  which  PEI 
Imperial committed to award the primary construction and mechanical contract to Lyles United, LLC or 
one of its affiliates for the construction of an ethanol production facility at the Company’s Imperial Valley 
site  near  Calipatria,  California  (the  “Project”),  conditioned  upon  PEI  Imperial  electing,  in  its  sole 
discretion, to proceed with the Project and Lyles United, LLC or its affiliate having all necessary licenses 
and is otherwise ready, willing and able to perform the primary construction and mechanical contract.  In 
the  event the foregoing  conditions  are  satisfied  and PEI  Imperial  awards  such contract  to a  party  other 
than Lyles United, LLC or one of its affiliates, PEI Imperial will be required to pay to Lyles United, LLC, 
as liquidated damages, an amount equal to $5,000,000.   

In December 2007, PEI  Imperial borrowed an additional $15,000,000 from Lyles United, LLC under a 
second Secured Promissory Note containing customary terms and conditions. The loan accrues interest at 
a rate equal to the Prime Rate of interest as reported from time to time in The Wall Street Journal, plus 
two percent (2.00%), computed on the basis of a 360-day year of twelve 30-day months.  The loan is due 
on  March  31,  2008  or,  if  extended  at  the  option  of  PEI  Imperial,  on  March  31,  2009.  If  the  loan  is 
extended, the interest rate increases by 2.00%. The loan is secured by substantially all of the assets of PEI 
Imperial  pursuant  to  the  Security  Agreement.  The  Company  has  guaranteed  the  repayment  of  the  loan 
pursuant  to  an  Unconditional  Guaranty  dated  December  27,  2007  containing  customary  terms  and 
conditions. The Company intends to extend the due date of the second Secured Promissory Note.   

Since the Company either has extended or has the intent and ability to extend the term of these notes to 
2009, it has classified these notes payable as noncurrent.    

Swap Note, due 2011 

The swap note is a term loan, with a floating interest rate, established on a quarterly basis, equal to the 90-
day LIBOR, plus 3.00%. The Company has entered into a swap contract with the lender to provide a fixed 
rate of 8.16%. The loan matures in five years, but has required principal payments due based on a ten-
year amortization schedule. Quarterly payments are approximately $678,000, including interest with final 
payment due November 10, 2011.  

Variable Rate Note, due 2011 

The variable rate note is a term loan that carries an interest rate that will float at a rate equal to the 90-day 
LIBOR, plus 2.75-3.50%, depending on a debt-to-net worth ratio. As of December 31, 2007, the interest 
rate  was  7.45%.  The  variable  loan  matures  in  five  years  but  is  amortized  over  10  years  with  a  final 
payment due November 10, 2011. Quarterly payments of approximately $654,000 which are applied in a 
cascading  order,  as  follows:  long-term  revolving  note  interest,  variable  rate  note  interest,  variable  rate 
note principal and long-term revolving note principal.  

F-32 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Long-Term Revolving Note, due 2011 

The long-term revolving note is a revolving loan in the amount of $5,000,000 and carries an interest rate 
that will float at a rate equal to the 30-day LIBOR, plus 2.75-3.50%, depending on a debt-to-net worth 
ratio. As of December 31, 2007, the interest rate was 7.45%. Repayment terms are included above in the 
description of the variable rate note. 

The  swap  note,  variable  rate  note  and  long-term  revolving  note  are  due  in  2011,  and  include  an 
accelerated principal reduction provision based on excess net cash flow. Excess net cash flow is measured 
on an annual basis and is defined as net income before interest expense, income taxes, depreciation and 
amortization and after giving effect to scheduled loan payments and capital expenditures. The provision 
requires the Company to pay 20% of its excess net cash flow within 120 days of its year end; however, 
this  amount  is  not  to  exceed  $4,000,000  per  fiscal  year.  The  accelerated  payment  for  the  year  ended 
December 31, 2007, estimated at $4,000,000, is expected to be paid prior to April 30, 2008 and will have 
the effect of increasing the maturities of long-term debt due in 2008 and decreasing the future maturities 
of long-term debt that would have been due in 2011.  

The  three  notes  listed  above  represent  permanent  financing  and  are  collateralized  by  a  perfected,  first-
priority security interest in all of the assets of Front Range, including inventories and all rights, title and 
interest in all tangible and intangible assets of Front Range; a pledge of 100% of the ownership interest in 
Front Range; an assignment of all revenues produced by Front Range; a pledge and assignment of Front 
Range’s material contracts and documents, to the extent assignable; all contractual cash flows associated 
with such agreements; and any other collateral security as the lender may reasonably request.  

These  collateralizations  restrict  the  assets  and  revenues  as  well  as  future  financing  strategies  of  Front 
Range, the Company’s variable interest entity, but do not apply to, nor have bearing upon any financing 
strategies that the Company may choose to undertake in the future. 

The carrying  values and classification of assets that are collateral for the obligations of Front Range at 
December 31, 2007 are as follows (in thousands): 

Current assets 
Property and equipment 
Other assets 

Total collateralized assets 

$            31,120 
50,519 
433 
$          82,072 

Front  Range  is  subject  to  certain  loan  covenants  that  were  effective  beginning  in  the  fourth  quarter  of 
2006. Under these covenants, Front Range is required to maintain a certain fixed-charge coverage ratio, a 
minimum level of working capital and a minimum level of net worth. The covenants also set a maximum 
amount  of  additional  debt  that  may  be  incurred  by  Front  Range.  The  covenants  also  limit  annual 
distributions  that  may  be  made  to  owners  of  Front  Range,  including  the  Company,  based  on  Front 
Range’s  leverage  ratio.  The  Company  believes  that  as  of  December  31,  2007,  Front  Range  was  in 
compliance with all terms and conditions of the above credit facilities. 

Water Rights Capital Lease 

The water rights lease obligation relates to a lease agreement with the Town of Windsor for augmentation 
water for use in Front Range’s production processes. The lease requires an initial payment of $400,000 
and annual payments of $160,000 per year for the next nine years. The future payments were discounted 
using a 5.25% interest rate which was comparable to available borrowing rates at the time of execution of 

F-33 

  
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

the agreement. The obligation has been recorded as a capital lease and included in long-term obligations 
and the related asset has been included in property and equipment. 

Interest Expense on Borrowings 

Interest  expense  on  all  borrowings  was  $1,882,000,  $720,000  and  $495,000,  for  the  years  ended 
December  31,  2007,  2006  and  2005,  respectively.  These  amounts  were  net  of  capitalized  interest  and 
deferred financing fees of $8,494,000, $671,000 and $298,000 for the years ended December 31, 2007, 
2006 and 2005, respectively, and included the Company’s construction costs of plant and equipment.  

The amounts of long-term debt maturing in each of the next five years are included below (in thousands):  

Years Ended 
December 31, 

2008 
2009 
2010 
2011 
2012 
Thereafter 
Total 

Amount 

$ 

7,637 
53,465 
7,260 
17,546 
5,661 
70,717 
$  162,286 

10.  RELATED PARTY NOTES PAYABLE. 

On December 28, 2004, January 10, 2005 and February 22, 2005, the chairman of the board of directors 
of  each  of  the  Company  and  PEI  California  advanced  the  Company  $20,000,  $60,000  and  $20,000, 
respectively, at 5% interest, due and payable upon the closing of the Share Exchange Transaction. The 
accumulated  principal  due was  repaid  on March  24, 2005  and the  related  interest  of  $921  was  paid  on 
April 15, 2005.  

On January 10, 2005, a shareholder and officer of PEI California advanced the Company $100,000 at 5% 
interest, due and payable upon the closing of the Share Exchange Transaction. The principal was repaid 
on March 24, 2005 and the related interest of $1,003 was paid on April 15, 2005. 

On January 31, 2005, a principal of Cagan-McAfee Capital Partners, LLC, a founding shareholder of PEI 
California,  advanced  the  Company  $100,000  at  5%  interest,  due  and  payable  upon  close  of  the  Share 
Exchange Transaction. The principal was repaid on March 24, 2005 and the related interest of $714 was 
paid on April 15, 2005. 

In  connection  with  the  acquisition  of  a  grain  facility  in  March  2003,  on  June  16,  2003,  PEI  California 
entered into a Term Loan Agreement (the “Loan Agreement”) with W.M. Lyles Co., a subsidiary of Lyles 
Diversified,  Inc.  (“LDI”),  whereby  LDI  loaned  PEI  California  $5,100,000.  In  addition,  PEI  California 
agreed to engage LDI at the appropriate time, on mutually acceptable terms substantially similar to the 
Design-Build  Agreement  for  the  Madera  facility,  under  a  design-build  agreement  for  a  second  ethanol 
production  facility.  On  March  23,  2005  the  Loan  Agreement  was  assigned  by  PEI  California  to  the 
Company.  On  April  13,  2006,  the  Company  and  LDI  entered  into  an  Amended  and  Restated  Loan 
Agreement (the “Amended and Restated Loan Agreement”) whereby the Loan Agreement was assigned 
by the Company to PEI Madera. 

F-34 

  
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

The Amended and Restated Loan Agreement provided for a fixed interest rate of 5% per annum on the 
unpaid principal balance through June 19, 2004, at which time the loan converted to a variable interest 
rate based on the Prime Rate, as reported in The Wall Street Journal, which was 7.25% as of December 
31,  2005,  plus  2%.  The  first  payment,  consisting  of  interest  only,  was  due  June  19,  2004,  after  which 
interest was due and payable monthly. Principal payments were due annually in three equal installments 
beginning  June  20,  2006  and  ending  June  20,  2008.  As  of  December  31,  2005,  $3,195,000  was 
outstanding  on  the  above  loan,  of  which  $1,200,000 was  a  current  liability  and  $1,995,000  was  a  non-
current liability. The loan balance was paid off in full on July 21, 2006.  

In partial consideration for entering into the Loan Agreement, PEI California issued 1,000,000 shares of 
common  stock  to  LDI.  The  fair  value  of  the  common  stock  on  the  date  of  issuance,  $1,203,000,  was 
recorded as a debt discount and was amortized over the life of the loan and recorded as interest expense. 
As of December 31, 2006 and 2005, the unamortized debt discount was $0 and $404,000, respectively.  

LDI  also  had  the  option  to  convert  up  to  $1,500,000  of  the  debt  into  PEI  California’s  and/or  the 
Company’s common stock, as the case may be, at a conversion price of $1.50 per share originally through 
March 31, 2005. On December 28, 2004, the Company and LDI amended the Loan Agreement to extend 
the conversion option through June 30, 2005. During 2004, LDI converted $255,000 of debt into 170,000 
shares  of  common  stock,  at  a  conversion  price  equal  to  $1.50  per  share.  Prior  to  June  30,  2005,  LDI 
converted $1,245,000 of debt into 830,000 shares of the Company’s common stock, at a conversion price 
equal to $1.50 per share. 

11.  CUMULATIVE EFFECT ADJUSTMENT. 

In  September  2006,  the  Commission  issued  SAB  No.  108,  Topic  1N,  Financial  Statements  — 
Considering the Effects of Prior Year Misstatements When Quantifying Misstatements in the Current Year 
Financial Statements. SAB No. 108 was issued in order to eliminate the diversity of practice surrounding 
how public companies quantify financial statement misstatements.  

Traditionally,  there  have  been  two  widely  recognized  methods  for  quantifying  the  effects  of  financial 
statement  misstatements:  the  “roll-over”  method  and  the  “iron  curtain”  method.  The  roll-over  method 
focuses primarily on the impact of a misstatement on the statements of operations, including the reversing 
effect of prior year misstatements, but its use can lead to the accumulation of misstatements in the balance 
sheet. The iron-curtain method, on the other hand, focuses primarily on the effect of correcting the period-
end  balance  sheet  with  less  emphasis  on  the  reversing  effects  of  prior  year  errors  on  the  statements  of 
operations.  The  Company  historically  used  the  roll-over  method  for  quantifying  identified  financial 
statement misstatements. 

In  SAB  No.  108,  the  Commission  established  an  approach  that  requires  quantification  of  financial 
statement  misstatements  based  on  the  effects  of  the  misstatements  on  each  of  the  company’s  financial 
statements and the related financial statement disclosures. This model is commonly referred to as a “dual 
approach”  because  it  requires  quantification  of  errors  under  both  the  iron  curtain  and  the  roll-over 
methods. 

SAB  No.  108  permits  existing  public  companies  to  initially  apply  its  provisions  either  by  (i)  restating 
prior  financial  statements  as  if  the  “dual  approach”  had  always  been  applied  or  (ii)  recording  the 
cumulative effect of initially applying the “dual approach” as adjustments to the carrying values of assets 
and  liabilities  as  of  January  1,  2006  with  an  offsetting  adjustment  recorded  to  the  opening  balance  of 
retained  earnings.  The  Company  elected  to  record  the  effects  of  applying  SAB  No.  108  using  the 
cumulative effect transition method.  

F-35 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

The following table summarizes the effects (up to January 1, 2006) of applying the guidance in SAB No. 
108 (in thousands): 

Period in Which 
Misstatement 
Originated(1) 

Year Ended 
December 31, 2005 
$ 
$ 
$ 

2,134 
(1,091) 
1,043 

Adjustment 
Recorded as of 
January 1, 2006 
$ 
$ 
$ 
$ 

2,134 
(1,091) 
— 
1,043 

Goodwill(2) 
Deferred tax liability(2) 
Impact on net income (loss)(3) 
Retained earnings(4) 
__________ 
(1) 

(2) 

(3) 

(4) 

The  Company  previously  quantified  these  errors  under  the  roll-over  method  and 
concluded that they were immaterial individually and in the aggregate. 
In allocating the purchase price with respect to the Kinergy acquisition, no adjustment 
was made to record a deferred tax liability for the difference between the recorded value 
of the assets acquired and their corresponding tax basis. Such an adjustment would have 
increased  goodwill  by  the  amount  of  the  deferred  tax  liability  recorded.  In  addition, 
goodwill  would  have  been  reduced  by  the  amount  of  any  valuation  allowance 
attributable  to  any  pre-acquisition  deferred  tax  asset  of  the  Company  that  could  more 
likely than not have been utilized against the recorded deferred tax liability.  
Represents the net overstatement of net loss for the indicated period resulting from the 
misstatements 
Represents the increase in retained earnings recorded as of January 1, 2006 to record the 
initial application of SAB No. 108. 

12.  INCOME TAXES.  

The asset and liability method is used to account for income taxes. Under this method, deferred tax assets 
and liabilities are recognized for tax credits and for the future tax consequences attributable to differences 
between  the  financial  statement  carrying  amounts  of  existing  assets  and  liabilities  and  their  tax  bases. 
Deferred  tax  assets  and  liabilities  are  measured  using  enacted  tax  rates  expected  to  apply  to  taxable 
income  in  the  years  in  which  those  temporary  differences  are  expected  to  be  recovered  or  settled.  A 
valuation  allowance  is  recorded to reduce the carrying  amounts  of  deferred  tax  assets  unless  it  is  more 
likely than not that such assets will be realized.  

The Company files a consolidated federal income tax return. This return includes all corporate companies 
80% or more owned by the Company as well as the Company’s pro-rata share of taxable income from 
pass-through  entities  in  which  Company  holds  an  ownership  interest.  State  tax  returns  are  filed  on  a 
consolidated, combined or separate basis depending on the applicable laws relating to the Company and 
its subsidiaries. 

Income taxes for each of the years ended December 31, 2007, 2006 and 2005 were $0.  

A  reconciliation  of  the  differences  between  the  United  States  statutory  federal  income  tax  rate  and  the 
effective tax rate as provided in the consolidated statements of operations is as follows: 

F-36 

  
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Statutory rate 
State income taxes, net of federal benefit 
Non-deductible items 
Valuation allowance relating to equity items 
Prior year purchase accounting adjustment 
Change in valuation allowance 
Other 

Effective rate 

Years Ended December 31, 
2006 

(35.0)% 
—  
15.6 
369.8 
1,599.9 
(2,091.8) 
141.5 

0.0% 

2007 

(35.0)% 
(5.9) 
0.8 
(8.3) 
— 
49.1 
(0.7) 
0.0% 

2005 

(35.0)% 
(5.7) 
10.7 
(4.7) 
— 
34.7 
— 
0.0% 

Deferred income taxes are provided using the asset and liability method to reflect temporary differences 
between the financial statement carrying amounts and tax bases of assets and liabilities using presently 
enacted tax rates and laws. The components of deferred income taxes included in the consolidated balance 
sheets were as follows (in thousands): 

December 31, 

Deferred tax assets: 
  Other accrued liabilities 

Stock option compensation 

      Derivative instruments mark-to-market 
      Available-for-sale securities 
  Net operating loss carryforward(1) 
  Other 
Total deferred tax assets 

Deferred tax liabilities: 

Fixed assets 
Investment in partnerships 
Intangibles 

  Available-for-sale securities 
  Derivative instruments 
Total deferred tax liabilities 

Valuation allowance 
Net deferred tax liabilities 

Classified in balance sheet as: 
  Deferred income tax benefit (current assets) 
  Deferred income taxes (long-term liability) 

2007 

189 
1,339 
2,341 
   970 
23,218 
132 
28,189 

(15,318) 
(995) 
(2,513) 
      —  
—  
(18,826) 

(10,454) 
(1,091) 

— 
(1,091) 
(1,091) 

$ 

$ 

$ 

$ 

2006 

140 
569 
      — 
      — 
6,623 
2 
7,334 

(1,228) 
(586) 
(2,997) 
(142) 
(80) 
(5,033) 

(3,392) 
(1,091) 

— 
(1,091) 
(1,091) 

$ 

$ 

$ 

$ 

_______________ 
(1)  The  deferred  tax  asset  for  the  Company’s  net  operating  loss  carryforwards  at 
December 31,  2007  does  not  include  $5,667,000  which  relates  to  the  tax  benefits 
associated with warrants and non-statutory options exercised by employees, members of 
the  board  and  others  under  the  various  incentive  plans.  These  tax  benefits  will  be 
recognized  in  stockholders’  equity  rather  than  in  the  statements  of  operations  in 
accordance  with  SFAS  No.  109  but  not  until  the  period  that  these  amounts  decrease 
taxes payable. 

At  December  31,  2007  and  2006,  the  Company  had  federal  net  operating  loss  carryforwards  of 
approximately $71,466,000 and $27,560,000, and state net operating loss carryforwards of approximately 

F-37 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  
 
 
 
 
 
 
  
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

$67,392,000 and $23,464,000, respectively. These net operating loss carryforwards expire at various dates 
beginning in 2013.  

A portion of the Company’s net operating loss carryforwards will be subject to provisions of the tax law 
that limit the use of losses incurred by a company prior to becoming a member of a consolidated group as 
well  as  losses  that  existed  at  the  time  there  is  a  change  in  control  of  an  enterprise.  The  amount  of  the 
Company’s net operating loss carryforwards that would be subject to these limitations was approximately 
$7,728,000 at December 31, 2007. 

In assessing whether the deferred tax assets are realizable, SFAS No. 109 establishes a more likely than 
not standard. If it is determined that it is more likely than not that deferred tax assets will not be realized, 
a  valuation  allowance  must  be  established  against  the  deferred  tax  assets.  The  ultimate  realization  of 
deferred tax assets is dependent upon the generation of future taxable income during the periods in which 
the associated temporary differences become deductible. Management considers the scheduled reversal of 
deferred  tax  liabilities,  projected  future  taxable  income  and  tax  planning  strategies  in  making  this 
assessment. 

A valuation allowance has been established in the amount of $10,454,000 in 2007 and $3,392,000 in 2006 
based  on  Company’s  assessment  of  the  future  realizability  of  certain  deferred  tax  assets.  For  the  years 
ending  December  31, 2007  and 2006,  the  Company  recorded an increase in the valuation allowance  of 
$7,062,000 and a decrease in the valuation allowance of $2,968,000, respectively. The reduction in the 
valuation allowance for 2006 was partially attributable to a cumulative effect adjustment. (See Note 11.) 
The valuation allowance on deferred tax assets is related to future deductible temporary differences and 
net operating loss carryforwards (exclusive of net operating losses associated with items recorded directly 
to equity) for which the Company has concluded it is more likely than not that these items will not be 
realized in the ordinary course of operations. 

On  January  1,  2007,  the  Company  adopted  the  provisions  of  FIN  48,  Accounting  for  Uncertainty  in 
Income  Taxes,  an  interpretation  of  FASB  Statement  No.  109,  Accounting  for  Income  Taxes.  FIN  48 
clarifies the accounting for uncertainty in income taxes recognized in the entity’s financial statements in 
accordance with SFAS No. 109. The adoption of FIN 48 did not result in a cumulative effect adjustment 
to  the  Company’s  retained  earnings.  As  of  the  date  of  adoption,  the  Company  had  no  unrecognized 
income tax benefits. Accordingly, the annual effective tax rate was not affected by the adoption of FIN 
48. Should the Company incur interest and penalties relating to tax uncertainties, such amounts would be 
classified as a component of interest expense and operating expense, respectively. 

At December 31, 2007, the Company had no increase or decrease in unrecognized income tax benefits for 
the year. There was no accrued interest or penalties relating to tax uncertainties at December 31, 2007. 
Unrecognized tax benefits are not expected to increase or decrease within the next twelve months.  

The Company is subject to income tax in the U.S. federal jurisdiction and various state jurisdictions and 
has  identified  its  federal  tax  return  and  tax  returns  in  state  jurisdictions  below  as  “major”  tax  filings. 
These jurisdictions, along with the years still open to audit under the applicable statutes of limitation, are 
as follows:   

Jurisdiction 

Tax Years 

Federal  
California 
Oregon  
Colorado 
Idaho 

2004 – 2006 
2003 – 2006 
2006 
2006 
2006 

F-38 

  
 
  
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

However,  because  the  Company  had  net  operating  losses  and  credits  carried  forward  in  several  of  the 
jurisdictions,  including  the  U.S.  federal and  California jurisdictions,  certain  items  attributable to  closed 
tax  years  are  still  subject  to  adjustment  by  applicable  taxing  authorities  through  an  adjustment  to  tax 
attributes carried forward to open years. 

13.  PREFERRED STOCK. 

Issuances  of  Preferred  Stock  –  On  April  13,  2006,  the  Company  issued to  Cascade  Investment,  L.L.C. 
(“Cascade”), 5,250,000 shares of Series A Cumulative Redeemable Convertible Preferred Stock (“Series 
A Preferred Stock”) at a price of $16.00 per share, for an aggregate purchase price of $84,000,000. The 
Company was entitled to use $4,000,000 of the proceeds for general working capital and was required to 
use  the  remaining  $80,000,000  for  the  construction  or  acquisition  of  one  or  more  ethanol  production 
facilities in accordance with the terms of a deposit agreement.  

Under  the  Certificate  of  Designations,  Powers,  Preferences  and  Rights  of  the  Series  A  Cumulative 
Redeemable  Convertible  Preferred  Stock,  the  Series  A  Preferred  Stock  ranks  senior  in  liquidation  and 
dividend preferences to the Company’s common stock. Holders of Series A Preferred Stock are entitled to 
quarterly  cumulative  dividends  payable  in  arrears  in  cash  in  an  amount  equal  to  5%  per  annum  of  the 
purchase price per share of the Series A Preferred Stock; however, such dividends may, at the Company’s 
option, be paid in additional shares of Series A Preferred Stock based on the value of the purchase price 
per share of the Series A Preferred Stock.  

The  Company  recorded  preferred  stock  dividends  of  $4,200,000  and  $2,998,000  for  the  years  ended 
December 31, 2007 and 2006, respectively. For all periods except for the three months ended December 
31,  2007,  the  Company  declared  cash  dividends  for  payment  of  the  preferred  stock  dividends.  For  the 
three  months  ended  December  31,  2007,  the  Company  elected  to  issue  an  additional  65,625  shares  of 
Series A Preferred Stock as a payment-in-kind of dividends. 

The holders of the Series A Preferred Stock have conversion rights initially equivalent to two shares of 
common stock for each share of Series A Preferred Stock. The conversion ratio is subject to customary 
antidilution  adjustments,  including  in  the  event  that  the  Company  issues  equity  securities  at  a  price 
equivalent  to  less  than $8.00  per share, including  derivative  securities convertible into  equity  securities 
(on  an  as-converted  or  as-exercised  basis).  Certain  specified  issuances  will  not  result  in  antidilution 
adjustments.  The  shares  of  Series  A  Preferred  Stock  are  also  subject  to  forced  conversion  upon  the 
occurrence of a transaction that would result in an internal rate of return to the holders of the Series A 
Preferred Stock of 25% or more. Accrued but unpaid dividends on the Series A Preferred Stock are to be 
paid in cash upon any conversion of the Series A Preferred Stock.  

The holders of Series A Preferred Stock have a liquidation preference over the holders of the Company’s 
common stock equivalent to the purchase price per share of the Series A Preferred Stock plus any accrued 
and unpaid dividends on the Series A Preferred Stock. A liquidation will be deemed to occur upon the 
happening  of  customary  events,  including  transfer  of  all  or  substantially  all  of  the  Company’s  capital 
stock or assets or a merger, consolidation, share exchange, reorganization or other transaction or series of 
related transaction, unless holders of 66 2/3% of the Series A Preferred Stock vote affirmatively in favor 
of or otherwise consent to such transaction. 

In connection with the issuance of the Series A Preferred Stock, the Company entered into a Registration 
Rights and Stockholders Agreement (the “Rights Agreement”) with Cascade. The Rights Agreement is to 
be effective until the holders of the Series A Preferred Stock, and their affiliates, as a group, own less than 
10%  of  the  Series  A  Preferred  Stock  issued  under  the  purchase  agreement  with  Cascade,  including 
common stock into which such Series A Preferred Stock has been converted (the “Termination Date”). 

F-39 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

The  Rights  Agreement  provides  that  holders  of  a  majority  of  the  Series  A  Preferred  Stock,  including 
common stock into which the Series A Preferred Stock has been converted, may demand and cause the 
Company, at any time after April 13, 2007, to register on their behalf the shares of common stock issued, 
issuable  or  that  may  be  issuable  upon  conversion  of  the  Series  A  Preferred  Stock  (the  “Registrable 
Securities”). Following such demand, the Company is required to notify any other holders of the Series A 
Preferred Stock or Registrable Securities of the Company’s intent to file a registration statement and, to 
the extent requested by such holders, include them in the related registration statement. The Company is 
required to keep such registration statement effective until such time as all of the Registrable Securities 
are  sold  or  until  such  holders  may  avail  themselves  of  Rule  144(k)  under  the  Securities  Act  of  1933, 
which  requires,  among  other  things,  a  minimum  two-year  holding  period  and  requires  that  any  holder 
availing itself of Rule 144(k) not be an affiliate of the Company. The holders are entitled to three demand 
registrations on Form S-1 and unlimited demand registrations on Form S-3; however, the Company is not 
obligated to effect more than two demand registrations on Form S-3 in any 12-month period. 

In addition to the demand registration rights afforded the holders under the Rights Agreement, the holders 
are entitled to “piggyback” registration rights. These rights entitle the holders who so elect to be included 
in  registration  statements  to  be  filed  by  the  Company  with  respect  to  other  registrations  of  equity 
securities. The holders are entitled to unlimited “piggyback” registration rights. 

Under  its  obligations  in  the  Rights  Agreement,  the  Company  filed  a  registration  statement  with  the 
Commission, registering for resale shares of the common stock up to 10,500,000. The Company filed the 
registration statement with the Commission and was declared effective in November 2007. 

The Rights Agreement also provides for the initial appointment of two persons designated by Cascade to 
the  Company’s  board  of  directors,  and  the  appointment  of  one  of  such  persons  as  the  chairman  of  the 
compensation  committee  of  the  Company’s  board  of  directors.  Following  a  specified  termination  date, 
Cascade is required to cause its director designees, and all other designees, to resign from all applicable 
committees and boards of directors, effective as of the termination date. 

Deemed  Dividend  on  Preferred  Stock  –  In  accordance  with  EITF  Issue  No.  98-5,  Accounting  for 
Convertible  Securities  with  Beneficial  Conversion  Features  or  Contingently  Adjustable  Conversion 
Ratios, and EITF Issue No. 00-27, Application of Issue No. 98-5 to Certain Convertible Instruments, the 
Series  A  Preferred  Stock  is  considered  to  have  an  embedded  beneficial  conversion  feature  because  the 
conversion price was less than the fair value of the Company’s common stock at the issuance date. The 
Company has recorded a deemed dividend on preferred stock of $28,000 and $84,000,000 for the years 
ended  December  31,  2007  and  2006,  respectively.  These  non-cash  dividends  are  to  reflect  the  implied 
economic value to the preferred stockholder of being able to convert its shares into common stock at a 
price which was in excess of the fair value of the Series A Preferred Stock at the time of issuance. The 
fair value allocated to the Series A Preferred Stock together with the original conversion terms were used 
to calculate the value of the deemed dividend on the Series A Preferred Stock on the date of issuance.  

For  the  year  ended  December  31,  2007,  the  fair  value  was  calculated  using  the  difference  between  the 
agreed-upon conversion price of the Series A Preferred Stock into shares of common stock of $8.00 per 
share and the fair market value of the Company’s common stock of $8.21 on the date of issuance of the 
Series A Preferred Stock.  

For  the  year  ended  December  31,  2006,  the  fair  value  was  calculated  using  the  difference  between  the 
agreed-upon conversion price of the Series A Preferred Stock into shares of common stock of $8.00 per 
share and the fair market value of the Company’s common stock of $29.27 on the date of issuance of the 
Series A Preferred Stock. The fair value allocated to the Series A Preferred Stock was in excess of the 
gross  proceeds  received  of  $84,000,000  in  connection  with  the  sale  of  the  Series  A  Preferred  Stock; 

F-40 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

however, the deemed dividend on the Series A Preferred Stock is limited to the gross proceeds received of 
$84,000,000.  

These amounts have been charged to accumulated deficit with the offsetting credit to additional paid-in-
capital. The  Company  has treated  the  deemed  dividend  on  preferred  stock  as  a reconciling  item  on  the 
consolidated  statements  of  operations  to  adjust  its  reported  net  loss,  together  with  any  preferred  stock 
dividends  recorded  during  the  applicable  period,  to  loss  available  to  common  stockholders  in  the 
consolidated statements of operations. 

Likely  Embedded  Derivative  –  Under  the  provisions  of  SFAS  No.  133,  the  Series  A  Preferred  Stock’s 
redemption  feature  was  likely  a  derivative  instrument  that  required  bifurcation  from  the  host  contract. 
SFAS  No.  133  requires  all  derivative  instruments  to  be  measured  at  fair  value.  However,  because  the 
underlying events that would cause the redemption feature to be exercisable (i.e., redemption events) are 
in  the  Company’s  control and  were  not  probable  of occurrence  in  the foreseeable  future,  the  Company 
believed  that  the  fair  value  of  the  embedded  derivative  was  de  minimis  at  the  date  of  issuance  of  the 
Series A Preferred Stock. As of December 31, 2007, the redemption events are no longer applicable, as 
the funds have been fully used for construction.  

14.  COMMON STOCK. 

In May 2006, the Company issued to 45 accredited investors an aggregate of 5,496,583 shares of common 
stock  at  a  price  of  $26.38  per  share,  for  an  aggregate  purchase  price  of  $145.0  million  in  cash.  The 
Company  designated  the  net  proceeds  of  approximately  $138.0  million,  net  of  capital  raising  fees  and 
expenses, for construction of additional ethanol plants and working capital. The Company also issued to 
the investors warrants to purchase an aggregate of 2,748,297 shares of common stock at an exercise price 
of $31.55 per share. These warrants expired unexercised in February 2007.  

The Company was obligated under a securities purchase agreement related to the above private offering 
to file, by June 30, 2006, a registration statement with the Commission, registering for resale shares of 
common  stock,  and  shares  of  common  stock  underlying  the  warrants,  issued  in  connection  with  the 
private  offering.  The  Company  filed the registration statement  with  the  Commission  on June  23,  2006. 
The registration statement was declared effective by the Commission on July 10, 2006. 

On March 23, 2005, PEI California issued to 63 accredited investors in a private offering an aggregate of 
7,000,000 shares of common stock at a purchase price of $3.00 per share, two-year investor warrants to 
purchase 1,400,000 shares of common stock at an exercise price of $3.00 per share and two-year investor 
warrants to purchase 700,000 shares of common stock at an exercise price of $5.00 per share, for total 
gross  proceeds  of  approximately  $21,000,000.  PEI  California  paid  cash  placement  agent  fees  and 
expenses  of  approximately  $1,850,000  and  issued  five-year  placement  agent  warrants  to  purchase 
678,000 shares of common stock at an exercise price of $3.00 per share in connection with the offering. 
Additional  costs  related  to  the  financing  include  legal,  accounting,  consulting  and  stock  certificate 
issuance fees that totaled approximately $275,000. 

The  Company  was  obligated  under  a  registration  rights  agreement  to  file,  on  the  151st  day  following 
March 23, 2005, a Registration Statement with the Commission registering for resale shares of common 
stock,  and  shares  of  common  stock  underlying  investor  warrants  and  certain  of  the  placement  agent 
warrants, issued in connection with the private offering. If (i) the Company did not file the Registration 
Statement  within  the  time  period  prescribed,  or  (ii)  the  Company  failed  to  file  with  the  Commission  a 
request  for  acceleration  in  accordance  with  Rule  461  promulgated  under  the  Securities  Act  of  1933, 
within five trading days of the date that the Company is notified (orally or in writing, whichever is earlier) 
by  the  Commission  that  the  Registration  Statement  will  not  be  “reviewed,”  or  is  not  subject  to  further 

F-41 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

review,  or  (iii)  the  Registration  Statement  filed  or  required  to  be  filed  under  the  registration  rights 
agreement  was  not  declared  effective  by  the  Commission  on  or  before  225  days  following  March  23, 
2005, or (iv) after the Registration Statement is first declared effective by the Commission, it ceases for 
any  reason  to  remain  continuously  effective  as  to  all  securities  registered  thereunder,  or  the  holders  of 
such securities are not permitted to utilize the prospectus contained in the Registration Statement to resell 
such securities, for more than an aggregate of 45 trading days during any 12-month period (which need 
not  be  consecutive  trading  days)  (any  such  failure  or  breach  being  referred  to  as  an  “Event,”  and  for 
purposes of clause (i) or (iii) the date on which such Event occurs, or for purposes of clause (ii) the date 
on which such five-trading day period is exceeded, or for purposes of clause (iv) the date on which such 
45-trading day-period is exceeded being referred to as “Event Date”), then in addition to any other rights 
the holders of such securities may have under the Registration Statement or under applicable law, then, on 
each such Event Date and on each monthly anniversary of each such Event Date (if the applicable Event 
shall not have been cured by such date) until the applicable Event is cured and except as disclosed below, 
the Company is required to pay to each such holder an amount in cash, as partial liquidated damages and 
not  as  a  penalty,  equal  to  2.0%  of  the  aggregate  purchase  price  paid  by  such  holder  pursuant  to  the 
Securities Purchase Agreement relating to such securities then held by such holder. If the Company fails 
to  pay  any  partial liquidated  damages  in  full  within  seven  days  after  the  date  payable,  the  Company  is 
required  to  pay  interest  thereon  at  a  rate  of  18%  per  annum  (or  such  lesser  maximum  amount  that  is 
permitted to be paid by applicable law) to such holder, accruing daily from the date such partial liquidated 
damages are due until such amounts, plus all such interest thereon, are paid in full. The partial liquidated 
damages are to apply on a daily pro-rata basis for any portion of a month prior to the cure of an Event.  

The Registration Rights Agreement also provides for customary piggy-back registration rights whereby 
holders of shares of the Company’s common stock, or warrants to purchase shares of common stock, can 
cause  the  Company  to  register  such  shares  for  resale  in  connection  with  the  Company’s  filing  of  a 
Registration  Statement  with  the  commission  to  register  shares  in  another  offering.  The  Registration 
Rights Agreement also contains customary representations and warranties, covenants and limitations. 

The  Registration  Statement  was  not  declared  effective  by  the  commission  on  or  before  225  days 
following  March 23,  2005.  The  Company  endeavored  to  have  all  security  holders  entitled  to  these 
registration rights execute amendments to the Registration Rights Agreement reducing the penalty from 
2.0%  to  1.0%  of  the  aggregate  purchase  price  paid  by  such  holder  pursuant  to  the  Securities  Purchase 
Agreement relating to such securities then held by such holder. This penalty reduction applies to penalties 
accrued  on  or  prior  to  January  31,  2006  as  a  result  of  the  related  Registration  Statement  not  being 
declared  effective  by  the  Commission.  Certain  of  the  security  holders  executed  this  amendment. 
However,  not  all  security  holders  executed  this  amendment  and  as  a  result,  the  Company  paid  an 
aggregate  of  $298,000  in  penalties  on  November  8,  2005.  The  Registration  Statement  was  declared 
effective by the Commission on December 1, 2005. 

The  Company  has  evaluated  the  classification  of  common  stock  and  warrants  issued  in  the  private 
offerings discussed above in accordance with EITF Issue No. 00-19, Accounting for Derivative Financial 
Instruments Indexed to, and Potentially Settled in, a Company’s Own Stock, and EITF  Issue No. D-98, 
Classification  and  Measurement  of  Redeemable  Securities.  The  Company  has  determined,  based  on  a 
valuation performed by an independent appraiser that the maximum potential liquidated damages are less 
than the difference in fair value between registered and unregistered shares of the Company’s stock and, 
therefore, has classified the common stock and warrants as equity. 

15.  STOCK-BASED COMPENSATION. 

The Company has three equity incentive compensation plans: an Amended 1995 Incentive Stock Plan, a 
2004 Stock Option Plan and a 2006 Stock Incentive Plan. 

F-42 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Amended 1995 Incentive Stock Plan 

The  Amended  1995  Incentive  Stock  Plan  was  carried  over  from  Accessity  as  a  result  of  the  Share 
Exchange  Transaction.  The  plan  authorized  the  issuance  of  incentive  stock  options  (“ISOs”)  and  non-
qualified stock options (“NQOs”), to the Company’s employees, directors or consultants for the purchase 
of  up  to  an  aggregate  of  1,200,000  shares  of  the  Company’s  common  stock.  On  July  19,  2006,  the 
Company  terminated  the  Amended  1995  Incentive  Stock  Plan,  except  to  the  extent  of  issued  and 
outstanding  options  then  existing  under  the  plan.  The  Company  had  40,000,  63,000  and  105,000  stock 
options outstanding under its Amended 1995 Incentive Stock Plan at December 31, 2007, 2006 and 2005, 
respectively. 

2004 Stock Option Plan 

The  2004  Stock  Option  Plan  authorized  the  issuance  of  ISOs  and  NQOs  to  the  Company’s  officers, 
directors or key employees or to consultants that do business with the Company for up to an aggregate of 
2,500,000  shares  of  common  stock.  On  September  7,  2006,  the  Company  terminated  the  2004  Stock 
Option  Plan,  except  to  the  extent  of  issued  and  outstanding  options  then  existing  under  the  plan.  The 
Company had 185,000, 405,000 and 822,500 stock options outstanding under its 2004 Stock Option Plan 
at December 31, 2007, 2006 and 2005, respectively.  

On  August  10,  2005,  the  Company  granted  options  to  purchase  an  aggregate  of  425,000  shares  of  the 
Company’s  common  stock  at  an  exercise  price  equal  to  $8.03,  the  closing  price  per  share  of  the 
Company’s common stock on the day immediately preceding that date, to its Chief Financial Officer. The 
options vested as to 85,000 shares immediately and 85,000 shares were to vest on each of the next four 
anniversaries of the date of grant. The options were to expire 10 years following the date of grant. Since 
the  options  were  granted  at  par  with  the  market  price  of  the  stock,  no  non-cash  charge  was  recorded. 
Upon  the  retirement  of  the  Chief  Financial  Officer  on  December  14,  2006,  the  unvested  stock  options 
related to this grant were forfeited, except for the options allotted under a consulting agreement entered 
into with the retired Chief Financial Officer on December 14, 2006. The consulting agreement provided 
for the immediate vesting of 42,500 stock options on December 14, 2006, and an additional 42,500 stock 
options  vested  on  August 15,  2007,  the  last  day  of  the  term  of  the  consulting  agreement,  provided  the 
obligations  under  the  consulting  agreement  were  fulfilled  by  the  retired  Chief  Financial  Officer.  The 
Company accounted for these options under the provisions of SFAS No. 123(R) and EITF Issue No. 96-
18,  Accounting  for  Equity  Instruments  That  Are  Issued  to  Other  Than  Employees  for  Acquiring,  or  in 
Conjunction with Selling, Goods or Services, and accordingly, has recorded compensation expense for the 
unvested stock options based on the fair value of those options at the end of the reporting period based on 
the  Black-Scholes  option-pricing  model  with  inputs  of:  the  closing  stock  price  on  the  last  day  of  the 
reporting period, an exercise price of $8.03, the remaining contractual term through August 15, 2007, and 
volatility of 73.1%. The Company recorded $151,000 and $312,000 in stock-based compensation expense 
relating to these options for the years ended December 31, 2007 and 2006, respectively. 

On  August  10,  2005,  the  Company  granted  options  to  purchase  an  aggregate  of  75,000  shares  of  the 
Company’s  common  stock  at  an  exercise  price  equal  to  $8.03,  the  closing  price  per  share  of  the 
Company’s  common  stock  on  the  day  immediately  preceding  that  date,  to  a  consultant.  The  options 
vested  as  to  15,000  shares  immediately  and  15,000  shares  were  to  vest  on  each  of  the  next  four 
anniversaries of the date of grant. The options were to expire 10 years following the date of grant. Under 
the  guidelines  of  EITF  Issue  No.  96-18,  based  on  the  consultant  meeting  its  obligations  under  the 
consulting agreement, the Company recorded compensation expense based on the fair value of the stock 
options  at  the  vesting  dates  and  on  the  last  day  of  the  reporting  period  for  the  unvested  stock  options, 
based on the Black-Scholes option-pricing model with inputs of: an exercise price of $8.03, the closing 
stock  price,  a  contractual  term  of  10  years,  and  volatility  of  53.6%.  Beginning  in  December  2006  the 

F-43 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

consultant stopped providing services and will not be providing services in the future under the existing 
consulting  agreement.  As  a  result,  the  unvested  stock  options  were  forfeited.  The  Company  recorded 
share-based compensation expense of $0, $174,000 and $104,000 for the years ended December 31, 2007, 
2006 and 2005, respectively, relating to these options.  

One  outstanding  option  granted  to  an  employee  of  the  Company  to  acquire  25,000  shares  of  common 
stock  vested  on  March  23,  2005  and  was  converted  into  a  warrant.  A  non-cash  charge  of  $232,000  to 
compensation  expense  was  recorded  for  the  year  ended  December  31,  2005  in  connection  with  this 
warrant. 

The Company issued an aggregate of 70,000 shares of common stock to two employees on their date of 
hire  on June  23,  2005.  A  non-cash  charge  of  $651,000  was  recorded  for the  year  ended  December  31, 
2005 in connection with these issuances. 

On  July  26,  2005,  the  Company  issued  options  to  purchase  an  aggregate  of  17,500  shares  of  the 
Company’s common stock at an exercise price equal to $7.01 per share, which exercise price equals 85% 
of  the  closing  price  per  share  of  the  Company’s  common  stock  on  that  date.  The  options  vested  upon 
issuance and expire 10 years following the date of grant. A non-cash charge of $22,000 to compensation 
expense was recorded for the year ended December 31, 2005 in connection with these issuances. 

On September 1, 2005, the Company granted options to purchase an aggregate of 160,000 shares of the 
Company’s common stock at an exercise price equal to $6.63 per share, which exercise price equals 85% 
of  the  closing  price  per  share  of  the  Company’s  common  stock  on  the  day  immediately  preceding  that 
date. The options expire 10 years following the date of grant. A non-cash charge of $59,000 was recorded 
to compensation expense for the year ended December 31, 2005. The options will be amortized ratably 
over  the  dates  of  additional  vesting  occurring  on  each  of  the  three  anniversaries  following  the  date  of 
grant.  

2006 Stock Incentive Plan 

The 2006 Stock Incentive Plan authorizes the issuance of options, restricted stock, restricted stock units, 
stock appreciation rights, direct stock issuances and other stock-based awards to the Company’s officers, 
directors or key employees or to consultants that do business with the Company for up to an aggregate of 
2,000,000 shares of common stock.  

The Company grants to certain employees and directors shares of restricted stock under its 2006 Stock 
Incentive Plan pursuant to Restricted Stock Agreements. A summary of unvested restricted stock activity 
is as follows (shares in thousands): 

Unvested at January 1, 2006 
Issued 
Vested 
Unvested at December 31, 2006 
Issued 
Vested 
Canceled 
Unvested at December 31, 2007 

Weighted 
Average 
Grant Date  
Fair Value 

$  — 

13.06 
13.06 
13.06 
15.11 
13.14 
13.72 
13.07 

$ 

Number of 
Shares 

— 
946 
(281) 
665 
19 
(140) 
(36) 
508 

F-44 

  
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

A summary of the status of Company’s stock option plans as of December 31, 2007, 2006 and 2005 and 
of  changes  in  options  outstanding  under  the  Company’s  plans  during  those  years  are  as  follows  (in 
thousands, except exercise prices): 

2007 

Years Ended December 31, 
2006 

2005 

Weighted-
Average 
Exercise 
Price 
$7.42 
— 

— 
7.79 
     — 
7.03 

$7.11 

Weighted-
Average 
Exercise 
Price 
$7.53 
— 

— 
7.06 
8.04 
7.42 

Weighted- 
Average 
Exercise 
Price 
$      0.01 
7.78 

5.98 
6.10 
0.01 
7.53 

Number of 
Shares 
25 
822 

378 
(270) 
(28) 
927 

$7.36 

262 

$ 

7.57 

Number 
of Shares 

927 
— 

— 
(196) 
(263) 
468 

297 

Number 
of Shares 
468 
— 

— 
(243) 
— 
225 

185 

Outstanding at beginning of year 
  Granted 
  Acquired in Share Exchange 

Transaction 

  Exercised 
  Terminated 
Outstanding at end of year 

Options exercisable at end of year 

Stock options outstanding as of December 31, 2007, were as follows (number of shares in thousands):  

Options Outstanding 

Options Exercisable 

Range of 
Exercise 
Prices 

$4.88-$6.63 
$8.25-$8.30 

Number 
Outstanding 

145 
80 
225 

Weighted 
Average 
Remaining 
Contractual 
Life 

Weighted-
Average 
Exercise 
Price 

5.98 
7.68 

$6.34 
$8.26 

Weighted 
Average 
Exercise 
Price 

$6.24 
$8.26 

Number 
Exercisable 

105 
80 
185 

The total intrinsic value of options outstanding was approximately $267,000 and $7,388,000 at December 
31, 2007 and 2006, respectively. The intrinsic value for exercisable options was $203,000 and $2,104,000 
at  December  31,  2007  and  2006, respectively. The total  intrinsic  value for stock  options exercised  was 
approximately $101,000 and $3,833,000 for the years ended December 31, 2007 and 2006, respectively.  

Warrants 

In  February  2004,  the  Company  entered  into  a  consulting  agreement  with  a  consultant  to  represent  the 
Company in investors’ communications and public relations with existing shareholders, brokers, dealers 
and other investment professionals as to the Company’s current and proposed activities.  

Pursuant to the consulting agreement, upon completion of the Share Exchange Transaction, the Company 
issued warrants to the consultant to purchase 230,000 additional shares of common stock at an exercise 
price of $0.0001 and expiring on March 23, 2009 that vested ratably over a period of two years from the 
date of the Share Exchange Transaction. The warrants were recognized at the fair value as of the start of 
business on March 24, 2005 in the amount of $2,139,000 and recorded as contra-equity. The fair value 
was amortized over two years, resulting in non-cash expense of $822,636 during the period from March 
24,  2005  to  December  31,  2005.  The  unvested  warrants  in  the  amount  of  $1,316,364  vested  ratably  at 
$89,125 per month over the remainder of the two year period.  

F-45 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

As  of  December  31,  2007,  there  were  no  outstanding  warrants,  as  all  warrants  issued  were  either 
exercised or expired. 

The following table summarizes warrant activity for the years ended December 31, 2007, 2006 and 2005 
(number of shares in thousands): 

Balance at December 31, 2004 
  Warrants granted 
  Warrants exercised 
Balance at December 31, 2005 
  Warrants granted 
  Warrants exercised 
Balance at December 31, 2006 
  Warrants exercised 
  Warrants expired 
Balance at December 31, 2007 

Adoption of SFAS No. 123(R) 

Number of 
Shares 
125 
3,058 
(278) 
2,905 
3,442 
(2,747) 
3,600 
(128) 
(3,472) 
— 

Price per 
Share 
$1.50 - $5.00 
$0.0001 - $5.00 
$0.0001 - $5.00 
$0.0001 - $5.00 
$14.41 – $31.55 
$0.0001 - $5.00 
$0.0001 – $31.55 
$0.0001 – $5.00 
$3.00 – $31.00 

Weighted 
Average 
Exercise Price 
$2.24 
3.21 
2.01 
3.26 
27.66 
3.28 
27.57 
2.84 
27.45 

$  — 

On January 1, 2006, the Company adopted SFAS No. 123(R), which requires a public entity to measure 
the cost of employee services received in exchange for the award of equity instruments based on the fair 
value of the award on the date of grant. The expense is to be recognized over the period during which an 
employee is required to provide services in exchange for the award. 

SFAS No. 123(R) provides for two transition methods. The “modified prospective” method requires that 
share-based compensation expense be recorded for any employee options granted after the adoption date 
and for the unvested portion of any employee options outstanding as of the adoption date. The “modified 
retrospective” method requires that, beginning in the first quarter of 2006, all prior periods presented be 
restated  to  reflect  the  impact  of  share-based  compensation  expense  consistent  with  the  pro  forma 
disclosures  previously  required  under  SFAS  No.  123.  The  Company  has  elected  to  use  the  “modified 
prospective” method in adopting this standard. 

The Company’s determination of fair value is affected by the Company’s common stock price as well as 
the  assumptions  discussed  above  that  require  management’s  judgment.  As  permitted  under  SFAS 
No. 123(R), the Company continued to use the Black-Scholes option-pricing model in order to calculate 
the compensation costs of employee stock-based compensation. Such model requires the use of subjective 
assumptions, including the expected life of the option, the expected volatility of the underlying stock, and 
the expected dividend on the stock. 

In computing the stock-based compensation, the following is a weighted-average of the assumptions used: 

Options Granted in 
Years Ended December 31, 

Risk-Free 
Interest Rate 

Expected Life 
at Issuance 

Expected 
Volatility 

Expected 
Dividends 

2007 
2006 
2005 

None 
None 
3.9 to 4.5% 

None 
None 
5.5 to 10 years 

None 
None 
53.6% 

None 
None 
None 

The risk-free interest rate assumption is based upon observed interest rates appropriate for the expected 
term of the stock options. The expected volatility is based on the historical volatility of the common stock 

F-46 

  
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

of an appropriate proxy company. The Company has not paid any dividends on its common stock since its 
inception and does not anticipate paying dividends on its common stock for the foreseeable future. The 
computation of the expected option term is based on expectations regarding future exercises of options 
which generally vest over 5.5 to 10 years. 

There were 40,000, 66,034 and 693,502 unvested options with weighted–average grant-date fair values of 
$6.63, $7.56 and $5.61, at December 31, 2007, 2006 and 2005, respectively.  

At  December  31,  2007,  the  total  compensation  cost  related  to  unvested  awards  which  had  not  been 
recognized was $6,187,000 and the associated weighted-average period over which the compensation cost 
attributable to those unvested awards would be recognized is 2.12 years.  

SFAS  No.  123(R)  requires  forfeitures  to  be  estimated  at  the  time  of  grant  and  revised,  if  necessary,  in 
subsequent  periods  if  actual  forfeitures  differ  from  those  estimates.  Based  on  historical  experience,  the 
Company estimated future unvested option forfeitures at 3% as of December 31, 2007. 

Stock-based  compensation  expense  related  to  employee  and  non-employee  stock  grants,  options  and 
warrants recognized in income were as follows (in thousands): 

Years Ended December 31, 

2007 

2006 

2005 

Employees – included in general and administrative 
Non-employees – included in general and administrative 
Total stock-based compensation expense 

$ 

$ 

1,671 
554 
2,225 

$ 

$ 

4,466 
1,782 
6,248 

$ 

$ 

963 
1,099 
2,062 

Effective  with  the  adoption  of  SFAS  No.  123(R),  stock-based  compensation  expense  related  to  the 
Company’s stock-based compensation arrangements attributable to employees is recorded as a component 
of general and administrative expense in the consolidated statements of operations. 

SFAS  No.  123(R)  requires  that  cash  flows  resulting  from  tax  deductions  in  excess  of  the  cumulative 
compensation cost recognized for options exercised (i.e., excess tax benefits) be classified as cash inflows 
from financing activities and cash outflows from operating activities. The aggregate amount of cash the 
Company received from the exercise of stock options was $1,894,000, $1,303,000 and $450,000 for the 
years ended December 31, 2007, 2006 and 2005, respectively, which shares, consistent with prior periods, 
were newly issued common stock. Prior to the adoption of SFAS No. 123(R), the Company reported the 
full tax benefits resulting from the exercise of stock options as operating cash flows. In accordance with 
SFAS  No. 123(R),  the  Company  now  presents  a  portion  of  such  tax  benefits  as  financing  cash  flows, 
which amount was $0 for the year ended December 31, 2006 due to the Company’s accumulated deficit 
position.  Prior  to  adopting  SFAS  No. 123(R),  the  Company  accounted  for  its  employee  stock-based 
compensation in accordance with Accounting Principles Board Opinion (“APB”) No. 25, Accounting for 
Stock  Issued  to  Employees,  and  related  interpretations.  Pursuant  to  APB  No. 25,  the  Company  did  not 
record  share-based  compensation,  but  followed  the  disclosure  requirements  of  SFAS  No. 123.  The 
Company’s financial results for prior periods have not been restated.  

The following table sets forth the theoretical pro forma costs and effect on net loss as if the Company had 
applied the fair value recognition provisions of SFAS No. 123(R) to employee stock-based compensation 
plans for the year ended December 31, 2005 (in thousands, except per share data): 

F-47 

  
 
 
 
 
 
 
  
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Net loss, as reported 
Stock-based employee compensation expense included 

$ 

(9,923) 

in reported net loss 

Stock-based compensation awards, fair value method 
Net loss, pro forma 
Net loss per share, basic and diluted 
Weighted-average shares outstanding, basic and diluted 

$ 
$ 

964 
(1,909) 
(10,868)   
(0.43)   

25,066 

16.  COMMITMENTS AND CONTINGENCIES. 

Commitments – The following is a description of significant commitments at December 31, 2007: 

Operating Leases–Future minimum lease payments required by non-cancelable operating leases in effect 
at December 31, 2007 are as follows (in thousands): 

Years Ended  
December 31, 
2008 
2009 
2010 
2011 
2012 
    Total 

Amount 

  $  2,247 
2,434 
2,424 
2,267 
    1,965 
  $ 11,337 

Total rent expense during the years ended December 31, 2007, 2006 and 2005 was $1,102,000, $254,000 
and $84,000, respectively.  

Purchase Commitments – At December 31, 2007, the Company had purchase contracts with its suppliers 
to purchase certain quantities of ethanol, corn, natural gas and denaturant. The volumes indicated in the 
indexed  price  table  are  at  publicly-indexed  sales  prices  determined  by  market  prices  in  effect  on  their 
respective transaction dates (in thousands): 

Ethanol (gallons) 
Corn (bushels) 
Natural gas (decatherms) 

Total 

Ethanol (gallons) 
Corn (bushels) 

Fixed-Price 
Contracts 

$ 

$ 

70,565 
4,369 
1,846 
76,780 

Indexed-Price 
Contracts 
(Volume) 

4,144 
2,400 

Sales Commitments – At December 31, 2007, the Company had entered into sales contracts with its major 
customers  to  sell  certain  quantities  of  ethanol  and  corn.  The  volumes  indicated  in  the  indexed  price 
contracts table will be sold at publicly-indexed sales prices determined by market prices in effect on their 
respective transaction dates (in thousands): 

F-48 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Ethanol (gallons) 
WDG 

Total 

Ethanol (gallons) 

Fixed-Price 
Contracts 

$ 

$ 

57,794 
14,756 
72,550 

Indexed-Price 
Contracts 
(Volume) 

40,572 

Carbon  Dioxide  Plant  –  On  April  4,  2007,  the  Company  entered  into  a  long-term  agreement  to  sell 
substantially  all  the  carbon  dioxide  gas  (“CO2”)  produced  by  the  Company’s  Madera  facility  to  a  third 
party.  Under  this  agreement  the  Company  will  modify  its  Madera  plant,  at  a  cost  of  approximately 
$1,500,000, to capture and further process CO2 for delivery to the third party. The agreement calls for the 
third  party  to  reimburse  the  Company  for  its  capital investment  through  a  recovery  fee  included  in  the 
agreed upon sales price and has a take-or-pay component which requires the third party to purchase, or if 
it does not purchase, pay for a minimum quantity of raw CO2. The agreement has a fifteen-year term and 
will automatically renew for successive five year periods unless terminated by either party. In February 
2008, the Company terminated this agreement. 

Capital  Commitments  –  Construction  commitments  for  in-progress  and  contracted  ethanol  processing 
facilities are approximately $118,357,000 for the year ended December 31, 2008. 

Contingencies – The following is a description of significant contingencies at December 31, 2007: 

Litigation – General – The Company is subject to legal proceedings, claims and litigation arising in the 
ordinary course of business. While the amounts claimed may be substantial, the ultimate liability cannot 
presently be determined because of considerable uncertainties that exist. Therefore, it is possible that the 
outcome of those legal proceedings, claims and litigation could adversely affect the Company’s quarterly 
or  annual  operating  results  or  cash  flows  when  resolved  in  a  future  period.  However,  based  on  facts 
currently available, management believes such matters will not adversely affect the Company’s financial 
position, results of operations or cash flows.  

Litigation  –  Barry  Spiegel  –  State  Court  Action  –  On  December  23,  2005,  Barry  J.  Spiegel,  a  former 
shareholder and director of Accessity, filed a complaint in the Circuit Court of the 17th Judicial District in 
and for Broward County, Florida (Case No. 05018512) (the “State Court Action”) against Barry Siegel, 
Philip  Kart,  Kenneth  Friedman  and  Bruce  Udell  (collectively,  the  “Individual  Defendants”).  Messrs. 
Siegel, Udell and Friedman are former directors of Accessity and Pacific Ethanol. Mr. Kart is a former 
executive officer of Accessity and the Company.  

The State Court Action relates to the Share Exchange Transaction and purports to state the following five 
counts  against  the  Individual  Defendants:  (i)  breach  of  fiduciary  duty,  (ii)  violation  of  the  Florida 
Deceptive  and  Unfair  Trade  Practices  Act,  (iii)  conspiracy  to  defraud,  (iv)  fraud,  and  (v)  violation  of 
Florida’s  Securities  and  Investor  Protection  Act.  Mr.  Spiegel  based  his  claims  on  allegations  that  the 
actions of the Individual Defendants in approving the Share Exchange Transaction caused the value of his 
Accessity  common  stock  to  diminish  and  is  seeking  $22.0  million  in  damages.  On  March  8,  2006,  the 
Individual Defendants filed a motion to dismiss the State Court Action. Mr. Spiegel filed his response in 
opposition on May 30, 2006. The Court granted the motion to dismiss by Order dated December 1, 2006 

F-49 

  
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

(the  “Order”),  on  the  grounds  that,  among  other  things,  Mr.  Spiegel  failed  to  bring  his  claims  as  a 
derivative action. 

On February 9, 2007, Mr. Spiegel filed an amended complaint which purported to state the following five 
counts: (i) breach of fiduciary duty, (ii) fraudulent inducement, (iii) violation of Florida’s Securities and 
Investor Protection Act, (iv) fraudulent concealment, and (v) breach of fiduciary duty of disclosure. The 
amended complaint includes the Company as a defendant. The breach of fiduciary duty counts are alleged 
solely against the Individual Defendants and not the Company. On June 19, 2007, the Company filed a 
motion  to  dismiss  the  amended  complaint.  The  Court  denied  the  motion  to  dismiss  the  amended 
complaint by order dated July 31, 2007. Mr. Spiegel, however, voluntarily dismissed without prejudice 
the case against the Company on August 27, 2007, and therefore the Company is no longer a party to the 
state action. 

Litigation  –  Barry  Spiegel  –  Federal  Court  Action  –  On  December  22,  2006,  Barry  J.  Spiegel,  filed  a 
complaint  in  the  United  States  District  Court,  Southern  District  of  Florida  (Case  No.  06-61848)  (the 
“Federal Court Action”) against the Individual Defendants and the Company. The Federal Court Action 
relates to the Share Exchange Transaction and purports to state the following three counts: (i) violations 
of  Section  14(a)  of  the  Exchange  Act  and  SEC  Rule  14a-9  promulgated  thereunder,  (ii)  violations  of 
Section 10(b) of the Exchange Act and Rule 10b-5 promulgated thereunder, and (iii) violation of Section 
20(A) of the  Exchange  Act. The  first two counts are alleged  against the  Individual  Defendants and the 
Company and the third count is alleged solely against the Individual Defendants. Mr. Spiegel bases his 
claims on, among other things, allegations that the actions of the Individual Defendants and the Company 
in connection with the Share Exchange Transaction resulted in a share exchange ratio that was unfair and 
resulted  in  the  preparation  of  a  proxy  statement  seeking  shareholder  approval  of  the  Share  Exchange 
Transaction that contained material misrepresentations and omissions. Mr. Spiegel is seeking in excess of 
$15.0 million in damages. Mr. Spiegel amended the Federal Court Action on February 9, 2007 and then 
sought to stay his own federal case, but the Motion was denied on July 17, 2007. Mr. Spiegel filed his 
reply to the Company’s Motion to Dismiss and that Motion remains pending.  The Company intends to 
vigorously defend the Federal Court Action.  

Litigation  –  Mercator  –  In  2003,  Accessity  filed  a  lawsuit  seeking  damages  in  excess  of  $100  million 
against:  (i)  Presidion  Corporation,  f/k/a  MediaBus  Networks,  Inc.,  the  parent  corporation  of  Presidion 
Solutions,  Inc.  (“Presidion”),  (ii)  Presidion’s  investment  bankers,  Mercator  Group,  LLC  (“Mercator”), 
and various related and affiliated parties, and (iii) Taurus Global LLC (“Taurus”), (collectively referred to 
as the “Mercator Action”), alleging that these parties committed a number of wrongful acts, including, but 
not limited to tortiously interfering in a transaction between Accessity and Presidion. In 2004, Accessity 
dismissed  this  lawsuit  without  prejudice,  which  was  filed  in  Florida  state  court.  In  January  2005, 
Accessity refiled this action in the State of California, for a similar amount, as Accessity believed that this 
was  the  proper jurisdiction.  On  August  18, 2005, the  court  stayed the action and  ordered  the  parties  to 
arbitration. The parties agreed to mediate the matter. Mediation took place on December 9, 2005 and was 
not  successful.  On  December 5,  2005,  the  Company  filed a  Demand  for  Arbitration  with  the  American 
Arbitration  Association.  On  April 6,  2006,  a  single  arbitrator  was  appointed.  Arbitration  hearings  had 
been scheduled to commence in July 2007. In April 2007, the arbitration proceedings were suspended due 
to  non-payment  of  arbitration  fees  by  Presidion  and  Taurus.  As  a  result  of  non-payment  of  arbitration 
fees,  a  default  order  was  entered  against  Taurus  by  the  Los  Angeles  Superior  Court.  In  July  2007,  the 
Company entered into a confidential settlement agreement with Presidion and its former officers. On July 
23,  2007,  the  Company  dismissed  Presidion  from  the  arbitration.  On  July  23,  2007,  Taurus  filed  a 
Voluntary  Petition  for  Chapter  7  Bankruptcy  in  the  United  States  District  Court,  Central  District  of 
California, Case Number SV07-12547 GM. The arbitration hearings against Mercator begun on February 
11, 2008 and concluded on February 19, 2008. After the hearings concluded but prior to an award being 
issued, the parties engaged in a two day mediation. As a result of the mediation, the parties entered into a 

F-50 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

confidential  settlement  agreement.  The  share  exchange  agreement  relating  to  the  Share  Exchange 
Transaction  provides  that  following  full  and  final  settlement  or  other  final  resolution  of  the  Mercator 
Action, after deduction of all fees and expenses incurred by the law firm representing the Company in this 
action and payment of the 25% contingency fee to the law firm, shareholders of record of Accessity on 
the  date  immediately  preceding  the  closing  date  of  the  Share  Exchange  Transaction  will  receive  two-
thirds and the Company will retain the remaining one-third of the net proceeds from any Mercator Action 
recovery.  

17.  DERIVATIVES/HEDGES. 

Derivatives – The business and activities of the Company expose it to a variety of market risks, including 
risks  related  to  changes  in  commodity  prices  and  interest  rates.  The  Company  monitors  and  manages 
these financial exposures as an integral part of its risk management program. This program recognizes the 
unpredictability  of  financial  markets  and  seeks  to  reduce  the  potentially  adverse  effects  that  market 
volatility could have on operating results. The Company accounts for its use of derivatives related to its 
hedging activities pursuant to SFAS No. 133, under which the Company recognizes all of its derivative 
instruments in its statement of financial position as either assets or liabilities, depending on the rights or 
obligations under the contracts, unless the contracts qualify as a normal purchase or normal sale as further 
discussed  below.  The  Company  has  designated  and  documented  contracts  for  the  physical  delivery  of 
commodity  products  to  and  from  counterparties  as  normal  purchases  and  normal  sales.  Derivative 
instruments are measured at fair value. Changes in the derivative’s fair value are recognized currently in 
income unless specific hedge accounting criteria are met. Special accounting for qualifying hedges allows 
a derivative’s effective gains and losses to be deferred in accumulated other comprehensive income and 
later recorded together with the gains and losses to offset related results on the hedged item in income. 
Companies  must  formally  document,  designate  and  assess  the  effectiveness  of  transactions  that  receive 
hedge  accounting.  Contracts  designated  and  documented  as  normal  purchases  or  normal  sales  are  not 
recorded at fair value.  

Commodity Risk – Cash Flow Hedges – The Company uses derivative instruments to protect cash flows 
from fluctuations caused by volatility in commodity prices for periods of up to twelve months in order to 
protect gross profit margins from potentially adverse effects of market and price volatility on ethanol sale 
and  purchase  commitments  where  the  prices  are  set  at  a  future  date  and/or  if  the  contracts  specify  a 
floating or index-based price for ethanol. In addition, the Company hedges anticipated sales of ethanol to 
minimize  its  exposure  to  the  potentially  adverse  effects  of  price  volatility.  These  derivatives  are 
designated  and  documented  as  SFAS  No.  133  cash  flow  hedges  and  effectiveness  is  evaluated  by 
assessing the probability of the anticipated transactions and regressing commodity futures prices against 
the  Company’s  purchase  and  sales  prices.  Ineffectiveness,  which  is  defined  as  the  degree  to  which  the 
derivative does not offset the underlying exposure, is recognized immediately in income.  

For the year ended December 31, 2007, a gain from ineffectiveness in the amount of $2,832,000 and an 
effective  loss  in  the  amount  of  $1,680,000  were  recorded  in  cost  of  goods  sold.  For  the  year  ended 
December  31,  2006,  losses  of  ineffectiveness  in  the  amount  of  $239,000  and  an  effective  loss  in  the 
amount  of  $438,000  was  recorded  in  cost  of  goods  sold.  For  the  year  ended  December  31,  2006,  an 
effective gain in the amount of $1,281,000 was recorded in net sales. Amounts remaining in accumulated 
other comprehensive income will be reclassified to income upon the recognition of the related purchase or 
sale. Accumulated other comprehensive loss in the amount of $455,000 associated with commodity cash 
flow hedges is expected to be recognized in income over the next twelve months. The notional balances 
remaining  on  these  derivatives  as  of  December  31,  2007  and  2006  was  $2,427,000  and  $11,588,000, 
respectively. 

F-51 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Commodity Risk – Non-Designated Hedges – As part of the Company’s risk management strategy, it uses 
forward contracts on corn, crude oil and reformulated blendstock for oxygenate blending gasoline to lock 
in  prices  for  certain  amounts  of  corn,  denaturant  and  ethanol,  respectively.  These  derivatives  are  not 
designated  under  SFAS  No.  133  for  special  hedge  accounting  treatment.  The  changes  in  fair  value  of 
these contracts are recorded on the balance sheet and recognized immediately in cost of goods sold. The 
Company  recognized  a  loss  of  $6,484,000  (of  which  $3,532,000  is  related  to  settled  non-designated 
hedges) and $0 as the change in the fair value of these contracts for the year ended December 31, 2007 
and 2006, respectively. The notional balances remaining on these contracts as of December 31, 2007 and 
2006 were  $29,999,000 and $0, respectively.  

Interest Rate Risk – As part of the Company’s interest rate risk management strategy, the Company uses 
derivative  instruments  to  minimize  significant  unanticipated  income  fluctuations  that  may  arise  from 
rising  variable  interest  rate  costs  associated  with  existing  and  anticipated  borrowings.  To  meet  these 
objectives the Company purchased interest rate caps and swaps. The rate for notional balances of interest 
rate caps ranging from $0 to $21,588,000 is 5.50%-6.00% per annum. The rate for notional balances of 
interest  rate  swaps  ranging  from  $0  to  $63,219,000  is  5.01%-8.16%  per  annum.  These  derivatives  are 
designated  and  documented  as  SFAS  No.  133  cash  flow  hedges  and  effectiveness  is  evaluated  by 
assessing  the  probability  of  anticipated  interest  expense  and  regressing  the  historical  value  of  the  rates 
against the historical value in the existing and anticipated debt. Ineffectiveness, reflecting the degree to 
which the derivative does not offset the underlying exposure, is recognized immediately in income. For 
the year ended December 31, 2007, losses from ineffectiveness in the amount of $4,836,000, losses from 
effectiveness in the amount of $147,000 and losses from undesignated hedges in the amount of $606,000 
were recorded in other income (expense). These losses resulted primarily from the Company’s deferral of 
constructing  its  Imperial  Valley  facility.  (See  Note  9.)  During  the  year  ended  December  31,  2006, 
ineffectiveness  in  the  amount  of  $24,000  was  recorded  in  other  income  (expense).  There  was  no 
ineffectiveness  for  the  year  ended  December  31,  2005.  Amounts  remaining  in  accumulated  other 
comprehensive income will be reclassified to income upon the recognition of the hedged interest expense. 
For  the  year  ending  December  31,  2008,  the  Company  anticipates  reclassifying  $595,000  to  income  in 
connection with its cash flow interest rate caps and swaps. 

The  Company  marked  its  derivative  instruments  to  fair  value  at  each  period  end,  except  for  those 
derivative  contracts  that  qualified  for  the  normal  purchase  and  sale  exemption  under  SFAS  No.  133. 
According  to  the  Company’s  designation  of  the  derivative,  changes  in  the  fair  value  of  derivatives  are 
reflected in income or accumulated other comprehensive income. 

Accumulated Other Comprehensive Income – Accumulated other comprehensive income relative to 
derivatives is as follows (in thousands): 

Beginning balance, January 1, 2007 

Net changes 
Less:  Amount reclassified to cost of goods sold 
Less:  Amount reclassified to other income (expense) 

Ending balance, December 31, 2007 

————— 
*Calculated on a pretax basis 

Commodity 
Derivatives 
Gain/(Loss)* 
$            461 
 (2,596) 
 (1,680) 
— 
 (455) 

$  

F-52 

Interest Rate 
Derivatives 
Gain/(Loss)* 
$ 

 (265) 
(1,810) 
— 
 (147) 
(1,928) 

$  

  
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

18.  RELATED PARTY TRANSACTIONS. 

Related  Customers  –  On  August  10,  2005,  the  Company  entered  into  a  six-month  sales  contract  with 
Southern Counties Oil Co., an entity owned by a former director and stockholder of the Company. The 
contract period was from  October 1, 2005 through March 31, 2006 for 5,544,000 gallons of fuel grade 
ethanol  to  be  delivered  ratably  at  approximately  924,000  gallons  per  month  at  varying  prices  based  on 
delivery destinations in California, Nevada and Arizona. On January 14, 2006, the Company entered into 
a second six-month sales contract with Southern Counties Oil Co. The contract period was from April 1, 
2006 through September 30, 2006 for 2,100,000 gallons of fuel-grade ethanol to be delivered ratably at 
approximately 350,000 gallons per month at varying prices based on delivery destinations in California. 
On June 13, 2006, the Company entered into a third six-month sales contract with a contract period from 
October  1,  2006  through  March  31,  2007  for  6,300,000  gallons  of  fuel-grade  ethanol  to  be  delivered 
ratably at approximately 1,050,000 gallons per month at varying prices based on delivery destinations in 
California,  Nevada  and  Arizona.  Sales  to  Southern  Counties  Oil  Co.  under  these  contracts  totaled 
$6,039,000,  $16,985,000  and  $9,060,000  for  the  years  ended  December  31,  2007,  2006  and  2005, 
respectively.  Accounts  receivable  from  Southern  Counties  Oil  Co.  related  to  these  contracts  totaled  $0 
and $1,188,000 at December 31, 2007 and 2006, respectively. 

During 2007, the Company started selling corn to Tri J Land and Cattle (“Tri J”), an entity owned by a 
director of the Company. The Company is not under contract with Tri J, but currently sells Tri J rolled 
corn on a spot basis as needed. Sales to Tri J totaled $166,000 for the year ended December 31, 2007 and 
$0  for  each  of  the  years  ended  December  31,  2006  and  2005.  Accounts  receivable  from  Tri  J  totaled 
$7,000 at December 31, 2007. 

Related Vendors – The Company purchased 18,628 bushels of corn from Jones Villere Farms (“JVF”), a 
company owned by a director of the Company. Purchases from JVF totaled $95,000 for the years ended 
December  31,  2007  and  $0  for  each  of  the  years  ended  December  31,  2006  and  2005.  There  were  no 
accounts payable due to JVF at December 31, 2007. 

The  Company  purchased  35,219  bushels  of  corn  from  Llanada  Farms  (“Llanada”),  an  affiliate  of  a 
director  of  the  Company  for  the  year  ended  December  31,  2006.  Purchases  from  Llanada  under  this 
contract  totaled  $112,000  for  the  year  ended  December  31,  2006.  There  were  no  additional  purchases 
during the years ended December 31, 2007 and 2005.  

The Company purchased 45,708 gallons of fuel grade ethanol from Southern Counties Oil Co., an entity 
owned  by  a  former  director  and  stockholder  of  the  Company  for  the  year  ended  December  31,  2005. 
Purchases  from  Southern  Counties  Oil  Co.  under  this  contract  totaled  $74,000  for  the  year  ended 
December 31, 2005. There were no additional purchases during the years ended December 31, 2007 and 
2006. Accounts payable to Southern Counties Oil Co. totaled $0 at December 31, 2007 and 2006. 

Plant  Development  and  Construction  –  In  2006,  the  Company  entered  into  an  agreement  with  a 
construction  company  to  build  an  ethanol  production  facility  in  Madera,  California.  An  officer  of  the 
construction company was a former member of the board of directors of PEI California. The Company 
had  outstanding  liabilities  to  the  construction  company  in  the  amount  of  $900,000  as  of  December  31, 
2007.  

The  Company  entered  into  a  consulting  agreement  with  a  shareholder  of  the  Company  for  consulting 
services related to the development of an ethanol plant. Compensation payable under the agreement was 
$6,000 per month. The Company paid a total of $21,000 for the year ended December 31, 2005. There 
were no additional payments for the years ended December 31, 2007 and 2006. 

F-53 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

Consulting  Agreement  –  Environmental  –  The  Company  entered  into  a  consulting  agreement  with  a 
company  owned  by  a  member  of  ReEnergy,  LLC  for  consulting  services  related  to  environmental 
regulations  and  permitting.  Compensation  payable  under  the  agreement  was  $3,000  per  month.  The 
Company  paid  a  total  of  $8,000  for  the  year  ended  December  31,  2005.  There  were  no  additional 
payments for the years ended December 31, 2007 and 2006. 

19.  QUARTERLY FINANCIAL DATA. 

The  Company’s  unaudited  quarterly  results  of  operations  for  the  years  ended  December  31,  2007  and 
2006 are as follows (in thousands): 

December 31, 2007: 

Net sales 
Gross profit 
Income (loss) from operations 
Net income (loss) 
Preferred stock dividend 
Deemed dividend on preferred stock 
Income (loss) available to common 

stockholders 

Income (loss) per common share: 

Basic and diluted  

First  
Quarter 

Second  
Quarter 

Third  
Quarter 

Fourth  
Quarter 

$ 
99,242 
$        15,341 
$          5,839 
$          2,975 
$         (1,050) 
$               — 

$ 
113,763 
$        11,121 
$          2,801 
$          2,156 
$         (1,050) 
$                — 

$  118,118 
$        4,759 
$       (1,161) 
$       (4,842) 
$       (1,050) 
$              — 

$ 
130,390 
$           1,678 
$         (5,402) 
$       (14,689) 
$         (1,050) 
$              (28) 

$          1,925 

$          1,106 

$       (5,892) 

$       (15,767) 

$ 

0.05 

$ 

0.03 

$ 

(0.15) 

$ 

(0.39) 

December 31, 2006: 

Net sales 
Gross profit 
Income (loss) from operations 
Net income (loss) 
Preferred stock dividend 
Deemed dividend on preferred stock 
Income (loss) available to common 

stockholders 

Income (loss) per common share: 

Basic and diluted  

20.  SUBSEQUENT EVENTS.  

First  
Quarter 

Second  
Quarter 

Third  
Quarter 

Fourth  
Quarter 

38,239 
$ 
$           2,325 
$            (659) 
$            (612) 
$                — 
$                — 

46,461 
$ 
$           3,308 
$         (1,451) 
$            (182) 
$            (898) 
$       (84,000) 

61,102 
$ 
$        7,448 
$        1,900 
$        3,755 
$       (1,050) 
$              — 

80,554 
$ 
$         11,748 
$             398 
$         (3,103) 
$         (1,050) 
$                — 

$            (612) 

$       (85,080) 

$        2,705 

$         (4,153) 

$ 

(0.02) 

$ 

(2.56) 

$ 

0.07 

$ 

(0.11) 

Note Extension – On February 25, 2008, the Company elected to extend the term of its $15,000,000 note 
payable and in connection with the terms of the extension, issued a warrant to purchase the Company’s 
common stock for $8.00 per share. (See Note 9.) 

Settlement of Mercator Litigation – In February 2008, the Company entered into a confidential settlement 
agreement with Mercator. (See Note 16.) 

Waiver  of  Defaults  under  Credit  Agreement  –  In  March  2008,  the  Company  became  aware  of  various 
events  or  circumstances  which  constituted  defaults  under  its  Credit  Agreement.  (See  Note  9.)    These 
events or circumstances included the existence of material weaknesses in the Company’s internal control 

F-54 

  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

over financial reporting as of December 31, 2007, cash management activities that violated covenants in 
its Credit Agreement, failure to maintain adequate amounts in a designated debt service reserve account, 
the  existence  of  a  number  of  Eurodollar  loans  in  excess  of  the  maximum  number  permitted  under  the 
Company’s Credit Agreement, and the Company’s failure to pay all remaining project costs on its Madera 
and  Boardman  facilities  by  certain  stipulated  deadlines.  On  March  26,  2008,  the  Company  obtained 
waivers  from  its  lenders  as  to  these  defaults  and  was  required  to  pay  the  lenders  a  consent  fee  in  an 
aggregate amount of up to approximately $600,000.  In addition to the waivers, the Company’s lenders 
agreed  to  amend  the  Credit  Agreement.  These  amendments  include  an  increase  in  the  frequency  with 
which the Company is to deposit certain revenues into a restricted account each month, an increase the 
allowable Eurodollar loans from a maximum of seven to a maximum of ten, and the Company is required 
to pay all remaining project costs on its Madera and Boardman facilities by May 16, 2008.  

Series B Financing Transaction 

Securities Purchase Agreement and Warrant 

On  March  18,  2008,  the  Company  entered  into  a  Securities  Purchase  Agreement  (the  “Purchase 
Agreement”) with Lyles United, LLC (the “Purchaser”). The Purchase Agreement provides for the sale by 
the  Company  and  the  purchase  by  the  Purchaser  of  (i)  2,051,282  shares  of  the  Company’s  Series  B 
Cumulative Convertible Preferred Stock (the “Series B Preferred Stock”), all of which would initially be 
convertible  into  an  aggregate  of  6,153,846  shares  of  the  Company’s  common  stock  based  on  an  initial 
three-for-one conversion ratio, and (ii) a warrant (the “Warrant”) to purchase an aggregate of 3,076,923 
shares of the Company’s common stock at an exercise price of $7.00 per share, for an aggregate purchase 
price of $40 million. On March 27, 2008, the Company consummated the purchase and sale of the Series 
B  Preferred  Stock.  The  Series  B  Preferred  Stock  was  created  under  the  Certificate  of  Designations 
described below. The Purchase Agreement includes customary representations and warranties on the part 
of both the Company and the Purchaser and other customary terms and conditions.   

The Warrant is exercisable at any time during the period commencing on the date that is six months and 
one  day  from  the  date of the  Warrant  and  ending  ten  years from  the  date  of  the  Warrant. The Warrant 
contains  customary  anti-dilution  provisions  for  stock  splits,  stock  dividends  and  the  like  and  other 
customary terms and conditions.  

Certificate of Designations 

The Certificate of Designations, Powers, Preferences and Rights of the Series B Cumulative Convertible 
Preferred Stock (the “Certificate of Designations”) provides for 3,000,000 shares of preferred stock to be 
designated  as  Series  B  Cumulative  Convertible  Preferred  Stock.  The  Series  B  Preferred  Stock  ranks 
senior in liquidation and dividend preferences to the Company’s common stock and on parity with respect 
to  dividend  and  liquidation  rights  with  the  Company’s  Series  A  Preferred  Stock.  Holders  of  Series  B 
Preferred  Stock  are  entitled  to  quarterly  cumulative  dividends  payable  in  arrears  in  cash  in  an  amount 
equal to 7.00% of the purchase price per share of the Series B Preferred Stock on a pari passu basis with 
the  holders  of  Series  A  Preferred  Stock;  however,  subject  to  the  provisions  of  the  Letter  Agreement 
described below, such dividends may, at the option of the Company, be paid in additional shares of Series 
B  Preferred  Stock  based  initially  on  liquidation  value  of  the  Series  B  Preferred  Stock.  The  holders  of 
Series B Preferred Stock have a liquidation preference over the holders of the Company’s common stock 
initially  equivalent  to  $19.50  per  share  of  the  Series  B  Preferred  Stock  plus  any  accrued  and  unpaid 
dividends  on  the  Series  B  Preferred  Stock  but  on  a  pro  rata  and  pari  passu  basis  with  the  holders  of 
Series A Preferred Stock. A liquidation will be deemed to occur upon the happening of customary events, 
including  transfer  of  all  or  substantially  all  of  the  capital  stock  or  assets  of  the  Company  or  a  merger, 
consolidation, share exchange, reorganization or other transaction or series of related transaction, unless 

F-55 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

holders of 66 2/3% of the Series B Preferred Stock vote affirmatively in favor of or otherwise consent that 
such transaction shall not be treated as a liquidation. 

The holders of the Series B Preferred Stock have conversion rights initially equivalent to three shares of 
common stock for each share of Series B Preferred Stock. The conversion ratio is subject to customary 
antidilution adjustments. In addition, antidilution adjustments are to occur in the event that the Company 
issues equity securities at a price equivalent to less than $6.50 per share, including derivative securities 
convertible  into  equity  securities  (on  an  as-converted  or  as-exercised  basis).  The  shares  of  Series  B 
Preferred  Stock  are  also  subject  to  forced  conversion  upon  the  occurrence  of  a  transaction  that  would 
result  in  an  internal  rate  of  return  to  the  holders  of  the  Series  B  Preferred  Stock  of  25%  or  more.  The 
forced conversion is to be based upon the conversion ratio as last adjusted. Accrued but unpaid dividends 
on  the  Series  B  Preferred  Stock  are  to  be  paid  in  cash  upon  any  conversion  of  the  Series  B  Preferred 
Stock. 

The holders of Series B Preferred Stock vote together as a single class with the holders of the Company’s 
Series A Preferred Stock and common stock on all actions to be taken by the Company’s stockholders.  
Each share of Series B Preferred Stock entitles the holder to the number of votes equal to the number of 
shares of common stock into which each share of Series B Preferred Stock is convertible on all matters to 
be voted on by the stockholders of the Company. Notwithstanding the foregoing, the holders of Series B 
Preferred  Stock  are  afforded  numerous  customary  protective  provisions  with  respect  to  certain  actions 
that may only be approved by holders of a majority of the shares of Series B Preferred Stock.  

As long as 50% of the shares of Series B Preferred Stock remain outstanding, the holders of the Series B 
Preferred Stock are afforded preemptive rights with respect to certain securities offered by the Company.  
The preemptive rights of the holders of the Series B Preferred Stock are subordinate to the preemptive 
rights of, and prior exercise thereof by, the holders of the Series A Preferred Stock.  

Registration Rights Agreement 

In  connection  with  the  closing  of  the  sale  of  its  Series  B  Preferred  Stock,  the  Company  entered  into  a 
Registration Rights Agreement with the Purchaser. The Registration Rights Agreement is to be effective 
until the holders of the Series B Preferred Stock, and their affiliates, as a group, own less than 10% of the 
Series B Preferred Stock issued under the Purchase Agreement, including common stock into which such 
Series  B  Preferred  Stock  has  been  converted  (the  “Termination  Date”).  The  Registration  Rights 
Agreement provides that holders of a majority of the Series B Preferred Stock, including common stock 
into which such Series B Preferred Stock has been converted, may demand and cause the Company, at 
any time after the first anniversary of the Closing, to register on their behalf the shares of common stock 
issued, issuable or that may be issuable upon conversion of the Series B Preferred Stock and as payment 
of dividends thereon, and upon exercise of the Warrant as well as upon exercise of a warrant to purchase 
100,000  shares  of  the  Company’s  common  stock  at  an  exercise  price  of  $8.00  per  share  and  issued  in 
connection  with  the  extension  of  the  maturity  date  of  a  loan,  as  discussed  above  (collectively,  the 
“Registrable  Securities”).  The  Company  is  required  to  keep  such  registration  statement  effective  until 
such time as all of the Registrable Securities are sold or until such holders may avail themselves of Rule 
144 for sales of Registrable Securities without registration under the Securities Act of 1933, as amended. 
The holders are entitled to two demand registrations on Form S-1 and unlimited demand registrations on 
Form  S-3;  provided,  however,  that  the  Company  is  not  obligated  to  effect  more  than  one  demand 
registration on Form S-3 in any calendar year. In addition to the demand registration rights afforded the 
holders  under  the  Registration  Rights  Agreement,  the  holders  are  entitled  to  unlimited  “piggyback” 
registration rights. These rights entitle the holders who so elect to be included in registration statements to 
be  filed  by  the  Company  with  respect  to  other  registrations  of  equity  securities.  The  Company  is 
responsible for all costs of registration, plus reasonable fees of one legal counsel for the holders, which 

F-56 

  
 
PACIFIC ETHANOL, INC. 
NOTES TO CONSOLIDATED FINANCIAL STATEMENTS 

fees are not to exceed $25,000 per registration. The Registration Rights Agreement includes customary 
representations and warranties on the part of both the Company and the Purchaser and other customary 
terms and conditions. 

Ancillary Agreements 

In  connection  with  the  closing  of  the  sale  of  its  Series  B  Preferred  Stock,  the  Company  entered  into  a 
Letter  Agreement  with  the  Purchaser  under  which  the  Company  expressly  waived  its  rights  under  the 
Certificate of Designation to make dividend payments in additional shares of Series B Preferred Stock in 
lieu of cash dividend payments without the prior written consent of the Purchaser.   

In  connection  with  the  closing  of  the  sale  of  its  Series  B  Preferred  Stock,  the  Company  entered  into  a 
Series  A  Preferred  Stockholder  Consent  and  Waiver  (the  “Consent  and  Waiver”)  with  Cascade 
Investment, L.L.C. (“Cascade”), the sole holder of the Company’s issued and outstanding shares of Series 
A Preferred Stock. Pursuant to the Consent and Waiver, Cascade waived its preemptive rights as to the 
issuance and sale of the Series B Preferred Stock, consented to the authorization, creation, issuance and 
sale  of  the  Series  B  Preferred  Stock,  and  consented  to  the  registration  rights  granted  under  the 
aforementioned  Registration  Rights  Agreement.  In  addition, each  of  the  Company  and  Cascade  waived 
the  right  to  adjust  the  conversion  price  of  the  Series  A  Preferred  Stock  with  respect  to  the  sale  and 
issuance of the Series B Preferred Stock and any shares of common stock issuable on conversion thereof 
or shares of Series B Preferred Stock payable as a dividend thereon. Under the Consent and Waiver, the 
Company  expressly  waived  its  rights  under  the  Certificate  of  Designations,  Powers,  Preferences  and 
Rights  of  the  Series  A  Preferred  Stock  to  make  dividend  payments  in  additional  shares  of  Series  A 
Preferred Stock in lieu of cash dividend payments without the prior written consent of Cascade.  

F-57 

  
 
 
Exhibit 
Number 

INDEX TO EXHIBITS 

Description 

2.1 

2.2 

2.3 

2.4 

2.5 

2.6 

2.7 

3.1 

3.2 

3.3 

3.4 

10.1 

10.2 

10.3 

10.4 

10.5 

10.6 

10.7 

10.8 

10.9 

Agreement and Plan of Merger dated March 23, 2005 between the Registrant and Accessity Corp. (1) 

Share Exchange Agreement dated as of May 14, 2004 by and among Accessity Corp., Pacific Ethanol, 
Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties named therein (1) 

Amendment No. 1 to Share Exchange Agreement dated as of July 29, 2004 by and among Accessity 
Corp., Pacific Ethanol, Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties named 
therein (1) 

Amendment No. 2 to Share Exchange Agreement dated as of October 1, 2004 by and among Accessity 
Corp., Pacific Ethanol, Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties named 
therein (1) 

Amendment No. 3 to Share Exchange Agreement dated as of January 7, 2005 by and among Accessity 
Corp., Pacific Ethanol, Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties named 
therein (1) 

Amendment No. 4 to Share Exchange Agreement dated as of February 16, 2005 by and among 
Accessity Corp., Pacific Ethanol, Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties 
named therein (1) 

Amendment No. 5 to Share Exchange Agreement dated as of March 3, 2005 by and among Accessity 
Corp., Pacific Ethanol, Inc., Kinergy Marketing, LLC, ReEnergy, LLC and the other parties named 
therein (1) 

Certificate of Incorporation of the Registrant (1) 

Certificate of Designations, Powers, Preferences and Rights of the Series A Cumulative Redeemable 
Convertible Preferred Stock (14) 

Certificate of Designations, Powers, Preferences and Rights of the Series B Cumulative Convertible 
Preferred Stock (29) 

Bylaws of the Registrant (1) 

Form of Registration Rights Agreement of various dates between Pacific Ethanol, Inc., a California 
corporation and the investors who are parties thereto (7) 

Form of Placement Warrant dated effective of various dates issued by Pacific Ethanol, Inc., a California 
corporation, to certain placement agents (7) 

Form of Registration Rights Agreement dated effective May 14, 2004 between Pacific Ethanol, Inc., a 
California corporation and the investors who are parties thereto (6) 

Form of Placement Warrant dated effective May 14, 2004 issued by Pacific Ethanol, Inc., a California 
corporation, to certain placement agents (7) 

Form of Registration Rights Agreement of various dates between Pacific Ethanol, Inc., a California 
corporation and the investors who are parties thereto (6) 

Form of Warrant of various dates issued to subscribers to a private placement of securities of Pacific 
Ethanol, Inc., a California corporation (7) 

Form of Registration Rights Agreement dated effective March 23, 2005 between Pacific Ethanol, Inc., a 
California corporation and the investors who are parties thereto (1) 

Form of Warrant dated March 23, 2005 issued by the Registrant to subscribers to a private placement of 
securities by Pacific Ethanol, Inc., a California corporation (1) 

Form of Placement Warrant dated March 23, 2005 issued by the Registrant to certain placement agents 
(1) 

 
 
Exhibit 
Number 

10.10 

10.11 

10.12 

10.13 

10.14 

10.15 

10.16 

10.17 

10.18 

10.19 

10.20 

10.21 

10.22 

10.23 

10.24 

10.25 

10.26 

10.27 

10.28 

10.29 

10.30 

10.31 

10.32 

Description 

Confidentiality, Non-Competition, Non-Solicitation and Consulting Agreement dated March 23, 2005 
between the Registrant and Barry Siegel (1) 

Confidentiality, Non-Competition, Non-Solicitation and Consulting Agreement dated March 23, 2005 
between the Registrant and Philip B. Kart (1) 

Form of Confidentiality, Non-Competition and Non-Solicitation Agreement dated March 23, 2005 
between the Registrant and each of Neil M. Koehler, Tom Koehler, William L. Jones, Andrea Jones 
and Ryan W. Turner (1) 

Confidentiality, Non-Competition and Non-Solicitation Agreement dated March 23, 2005 between the 
Registrant and Neil M. Koehler (1) 

Form of Indemnification Agreement between the Registrant and each of its Executive Officers and 
Directors (#) (14) 

Executive Employment Agreement dated March 23, 2005 between the Registrant and Neil M. Koehler 
(#)(1) 

Executive Employment Agreement dated March 23, 2005 between the Registrant and Ryan W. Turner 
(#)(1) 

Stock Purchase Agreement and Assignment and Assumption Agreement dated March 23, 2005 between 
the Registrant and Barry Siegel (1) 

Letter Agreement dated March 23, 2005 between the Registrant and Neil M. Koehler (1) 

Ethanol Purchase and Marketing Agreement dated March 4, 2005 between Kinergy Marketing, LLC, 
Phoenix Bio-Industries, LLC, Pacific Ethanol, Inc. and Western Milling, LLC (2) 

Pacific Ethanol Inc. 2004 Stock Option Plan (3) 

First Amendment to Pacific Ethanol, Inc. 2004 Stock Option Plan (13) 

Amended 1995 Stock Option Plan (4) 

Warrant dated March 23, 2005 issued by the Registrant to Liviakis Financial Communications, Inc. (1) 

Executive Employment Agreement dated August 10, 2005 between the Registrant and William G. 
Langley (#)(5) 

Ethanol Marketing Agreement dated as of August 31, 2005 by and between Kinergy Marketing, LLC 
and Front Range Energy, LLC (8) 

Master Revolving Note dated September 24, 2004 of Kinergy Marketing, LLC in favor of Comerica 
Bank (9) 

Loan Revision/Extension Agreement dated October 4, 2005 and effective as of June 20, 2005 between 
Kinergy Marketing, LLC and Comerica Bank (9) 

Letter Agreement dated as of October 4, 2005 between Kinergy Marketing, LLC and Comerica Bank 
(9) 

Guaranty dated October 4, 2005 by Pacific Ethanol, Inc. in favor of Comerica Bank (9) 

Security Agreement dated as of September 24, 2004 executed by Kinergy Marketing, LLC in favor of 
Comerica Bank (12) 

Amended and Restated Phase 1 Design-Build Agreement dated November 2, 2005 by and between 
Pacific Ethanol Madera LLC and W.M. Lyles Co. (10) 

Phase 2 Design-Build Agreement dated November 2, 2005 by and between Pacific Ethanol Madera 
LLC and W.M. Lyles Co. (10) 

 
 
Exhibit 
Number 

10.33 

10.34 

10.35 

10.36 

10.37 

10.38 

10.39 

10.40 

10.41 

10.42 

10.43 

10.44 

10.45 

10.46 

10.47 

10.48 

10.49 

10.50 

10.51 

10.52 

10.53 

Description 

Letter Agreement dated November 2, 2005 by and between Pacific Ethanol California, Inc. and 
W.M. Lyles Co. (10) 

Continuing Guaranty dated as of November 3, 2005 by William L. Jones in favor of W.M. Lyles Co. 
(10) 

Continuing Guaranty dated as of November 3, 2005 by Neil M. Koehler in favor of W.M. Lyles Co. 
(10) 

Description of Non-Employee Director Compensation (11) 

Purchase Agreement dated November 14, 2005 between Pacific Ethanol, Inc. and Cascade Investment, 
L.L.C. (11) 

Deposit Agreement dated April 13, 2006 by and between Pacific Ethanol, Inc. and Comerica Bank (14) 

Registration Rights and Stockholders Agreement dated as of April 13, 2006 by and between Pacific 
Ethanol, Inc. and Cascade Investment, L.L.C. (14) 

Amendment No. 1 to Ethanol Purchase and Marketing Agreement dated effective as of March 4, 2005 
between Kinergy Marketing, LLC, Phoenix Bio-Industries, LLC, Pacific Ethanol, Inc. and Western 
Milling, LLC (14) 

Construction and Term Loan Agreement dated April 10, 2006 by and among Pacific Ethanol Madera 
LLC, Comerica Bank and Hudson United Capital, a division of TD Banknorth, N.A. (14) 

Construction Loan Note dated April 13, 2006 by Pacific Ethanol Madera LLC in favor of Comerica 
Bank (14) 

Construction Loan Note dated April 13, 2006 by Pacific Ethanol Madera LLC in favor of Hudson 
United Capital, a division of TD Banknorth, N.A. (14) 

Assignment and Security Agreement dated April 13, 2006 by and between Pacific Ethanol Madera LLC 
and Hudson United Capital, a division of TD Banknorth, N.A. (14) 

Member Interest Pledge Agreement dated April 13, 2006 by Pacific Ethanol Madera LLC in favor of 
Hudson United Capital, a division of TD Banknorth, N.A. (14) 

Disbursement Agreement dated April 13, 2006 by and among Pacific Ethanol Madera LLC, Hudson 
United Capital, a division of TD Banknorth, N.A., Comerica Bank and Wealth Management Group of 
TD Banknorth, N.A. (14) 

Amended and Restated Term Loan Agreement effective as of April 13, 2006 by and between Lyles 
Diversified, Inc. and Pacific Ethanol Madera LLC (14) 

Letter Agreement dated as of April 13, 2006 by and among Pacific Ethanol California, Inc., Lyles 
Diversified, Inc. and Pacific Ethanol Madera LLC (14) 

Deed of Trust, Assignment of Leases and Rents, Security Agreement and Fixture Filing dated April 13, 
2006 by Pacific Ethanol Madera LLC in favor of Hudson United Capital, a division of TD Banknorth, 
N.A. (15) 

Deed of Trust (Non-Construction) Security Agreement and Fixture Filing with Assignment of Rents 
dated April 13, 2006 by Pacific Ethanol Madera LLC in favor of Lyles Diversified, Inc. (15) 

Securities Purchase Agreement dated as of May 25, 2006 by and among Pacific Ethanol, Inc. and the 
investors listed on the Schedule of Investors attached thereto as Exhibit A (16) 

Form of Warrant dated May 31, 2006 (16) 

Executive Employment Agreement dated as of June 26, 2006 by and between Pacific Ethanol, Inc. and 
John T. Miller (17) 

 
 
Exhibit 
Number 

10.54 

10.55 

10.56 

10.57 

10.58 

10.59 

10.60 

10.61 

10.62 

10.63 

10.64 

10.65 

10.66 

10.67 

10.68 

10.69 

10.70 

10.71 

10.72 

Description 

Executive Employment Agreement dated as of June 26, 2006 by and between Pacific Ethanol, Inc. and 
Christopher W. Wright (17) 

Amended and Restated Ethanol Purchase and Sale Agreement dated as of August 9, 2006 by and 
between Kinergy Marketing, LLC and Front Range Energy, LLC (18) 

Construction Agreement for the Boardman Project between Pacific Ethanol Columbia, LLC and 
Parsons RCIE Inc. dated as of August 28, 2006 (19) 

Engineering, Procurement and Technology License Agreement dated September 6, 2006 by and 
between Delta-T Corporation and PEI Columbia, LLC (*)(21) 

Engineering, Procurement and Technology License Agreement (Plant No. 3) dated September 6, 2006 
by and between Delta-T Corporation and Pacific Ethanol, Inc. (*)(21) 

Engineering, Procurement and Technology License Agreement (Plant No. 4) dated September 6, 2006 
by and between Delta-T Corporation and Pacific Ethanol, Inc. (*)(21) 

Engineering, Procurement and Technology License Agreement (Plant No. 5) dated September 6, 2006 
by and between Delta-T Corporation and Pacific Ethanol, Inc. (*)(21) 

Pacific Ethanol, Inc. 2006 Stock Incentive Plan (#)(20) 

Form of Employee Restricted Stock Agreement (#)(22) 

Form of Non-Employee Director Restricted Stock Agreement (#)(22) 

Amendment No. 1 to Construction and Term Loan Agreement and Agreement as to Future Financing 
Transactions  dated  September  29,  2006  by  and  among  Pacific  Ethanol  Madera  LLC,  TD  Banknorth, 
N.A., Comerica Bank and Pacific Ethanol, Inc. (23) 

Membership Interest Purchase Agreement dated as of October 17, 2006 by and among Eagle Energy, 
LLC, Pacific Ethanol California, Inc. and Pacific Ethanol, Inc. (24) 

Warrant to Purchase Common Stock dated October 17, 2006 issued to Eagle Energy, LLC by Pacific 
Ethanol, Inc. (24) 

Registration Rights Agreement dated as of October 17, 2006 by and between Pacific Ethanol, Inc. and 
Eagle Energy, LLC (24) 

Second Amended and Restated Operating Agreement of Front Range Energy, LLC among the members 
identified therein (as amended by Amendment No. 1 described below) (24) 

Amendment No. 1, dated as of October 17, 2006, of the Second Amended and Restated Operating 
Agreement of Front Range Energy, LLC to Add a Substitute Member and for Certain Other Purposes 
(24) 

Form of Non-Competition Agreement dated as of October 17, 2006 by and among Pacific Ethanol, Inc., 
Front Range Energy, LLC and each of the members of Eagle Energy, LLC (24) 

Amendment to Amended and Restated Ethanol Purchase and Sale Agreement dated October 17, 2006 
between Kinergy Marketing, LLC and Front Range Energy, LLC (24) 

Separation and Consulting Agreement dated December 14, 2006 between Pacific Ethanol, Inc. and 
William G. Langley (25) 

 
 
Exhibit 
Number 

10.73 

10.74 

10.75 

10.76 

10.77 

10.78 

10.79 

10.80 

10.81 

10.82 

10.83 

10.84 

10.85 

21.1 

23.1 

31.1 

31.2 

32.1 

Description 

Credit Agreement, dated as of February 27, 2007, by and among Pacific Ethanol Holding Co. LLC, 
Pacific Ethanol Madera LLC, Pacific Ethanol Columbia, LLC, Pacific Ethanol Stockton, LLC, Pacific 
Ethanol Imperial, LLC, and Pacific Ethanol Magic Valley, LLC, as borrowers, the lenders party thereto, 
WestLB AG, New York Branch, as administrative agent, lead arranger and sole book runner, WestLB 
AG, New York Branch, as collateral agent, Union Bank of California, N.A., as accounts bank, Mizuho 
Corporate Bank, Ltd., as lead arranger and co-syndication agent, CIT Capital Securities LLC, as lead 
arranger and co-syndication agent, Cooperative Centrale Raiffeisen-Boerenleenbank BA., “Rabobank 
Nederland”, New York Branch, and Banco Santander Central Hispano S.A., New York Branch (26) 

Sponsor Support Agreement, dated as of February 27, 2007, by and among Pacific Ethanol, Inc., 
Pacific Ethanol Holding Co. LLC and WestLB AG, New York Branch, as administrative agent (26) 

Executive Employment Agreement dated December 11, 2007 by and between Pacific Ethanol, Inc. and 
Joseph W. Hansen (#) (27) 

Indemnification Agreement as of January 2, 2008 by and between Pacific Ethanol, Inc. and Joseph W. 
Hansen (#) (27) 

Amended and Restated Executive Employment Agreement dated December 11, 2007 by and between 
Pacific Ethanol, Inc. and Neil M. Koehler (#) (27) 

Amended and Restated Executive Employment Agreement dated December 11, 2007 by and between 
Pacific Ethanol, Inc. and John T. Miller (#) (27) 

Amended and Restated Executive Employment Agreement dated December 11, 2007 by and between 
Pacific Ethanol, Inc. and Christopher W. Wright (#) (27) 

Securities Purchase Agreement dated March 18, 2008 by and between Pacific Ethanol, Inc. and Lyles 
United, LLC (28) 

Warrant dated March 27, 2008 issued by Pacific Ethanol, Inc. to Lyles United, LLC (29) 

Registration Rights Agreement dated as of March 27, 2008 by and between Pacific Ethanol, Inc. and 
Lyles United, LLC (29) 

Letter Agreement dated March 27, 2008 by and between Pacific Ethanol, Inc. and Lyles United, LLC 
(29) 

Series A Preferred Stockholder Consent and Waiver dated March 27, 2008 by and between Pacific 
Ethanol, Inc. and Cascade Investment, L.L.C. (29) 

Form of Waiver and Third Amendment to Credit Agreement dated as of March 25, 2008 by and among 
Pacific Ethanol, Inc. and the parties thereto (29) 

Subsidiaries of the Registrant 

Consent of Independent Registered Public Accounting Firm 

Certification Required by Rule 13a-14(a) of the Securities Exchange Act of 1934, as amended, as 
Adopted Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002 

Certification Required by Rule 13a-14(a) of the Securities Exchange Act of 1934, as amended, as 
Adopted Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002 

Certification of Chief Executive Officer and Chief Financial Officer Pursuant to 18 U.S.C. Section 
1350, as Adopted Pursuant to Section 906 of the Sarbanes-Oxley Act of 2002 

_______________ 
(#) 
(*) 

Management contract or compensatory plan, contract or arrangement required to be filed as an exhibit. 
Portions of this exhibit have been omitted pursuant to a request for confidential treatment filed with the 
Securities and Exchange Commission. 

 
 
(1) 

(2) 

(3) 

(4) 

(5) 

(6) 

(7) 

(8) 

(9) 

(10) 

(11) 

(12) 

(13) 

(14) 

(15) 

(16) 

(17) 

(18) 

(19) 

(20) 

(21) 

(22) 

(23) 

(24) 

(25) 

(26) 

Filed as an exhibit to the Registrant’s current report on Form 8-K for March 23, 2005 filed with the 
Securities and Exchange Commission on March 29, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s quarterly report on Form 10-QSB for March 31, 2005 (File No. 0-
21467) filed with the Securities and Exchange Commission on May 23, 2005 and incorporated herein by 
reference. 
Filed as an exhibit to the Registrant’s Registration Statement on Form S-8 (Reg. No. 333-123538) filed 
with the Securities and Exchange Commission on March 24, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s annual report Form 10-KSB for December 31, 2002 (File No. 0-
21467) filed with the Securities and Exchange Commission on March 31, 2003 and incorporated herein by 
reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for August 10, 2005 filed with the 
Securities and Exchange Commission on August 16, 2005 and incorporated herein by reference. 
The Form of the Registration Rights Agreement was filed as Exhibit 4.4 to the Registrant’s Registration 
Statement on Form S-1 (Reg. No. 333-127714) filed with the Securities and Exchange Commission on 
August 19, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s Registration Statement on Form S-1 (Reg. No. 333-127714) filed 
with the Securities and Exchange Commission on August 19, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for August 31, 2005 filed with the 
Securities and Exchange Commission on September 7, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for November 1, 2005 filed with the 
Securities and Exchange Commission on November 7, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for November 2, 2005 filed with the 
Securities and Exchange Commission on November 8, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for November 10, 2005 filed with the 
Securities and Exchange Commission on November 15, 2005 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s Amendment No. 2 to Registration Statement on Form S-1 (Reg. No. 
333-127714) filed with the Securities and Exchange Commission on November 22, 2005 and incorporated 
herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for January 26, 2006 filed with the 
Securities and Exchange Commission on February 1, 2006 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s annual report on Form 10-KSB for December 31, 2005 filed with the 
Securities and Exchange Commission on April 14, 2006 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for April 13, 2006 filed with the 
Securities and Exchange Commission on April 19, 2006 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s current report on Form 8-K for May 25, 2006 filed with the Securities 
and Exchange Commission on May 31, 2006 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for June 26, 2006 filed with the 
Securities and Exchange Commission on June 27, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for August 9, 2006 filed with the 
Securities and Exchange Commission on August 15, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for August 23, 2006 filed with the 
Securities and Exchange Commission on August 29, 2006. 
Filed as an exhibit to the Registrant’s Registration Statement on Form S-8 (Reg. No. 333-137663) filed 
with the Securities and Exchange Commission on September 29, 2006. 
Filed as an exhibit to the Registrant’s quarterly report on Form 10-Q for September 30, 2006 filed with the 
Securities and Exchange Commission on November 20, 2006 and incorporated herein by reference. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for October 4, 2006 filed with the 
Securities and Exchange Commission on October 10, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for October 2, 2006 filed with the 
Securities and Exchange Commission on October 12, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for October 17, 2006 filed with the 
Securities and Exchange Commission on October 23, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for December 14, 2006 filed with the 
Securities and Exchange Commission on December 15, 2006. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for February 27, 2007 filed with the 
Securities and Exchange Commission on March 5, 2007. 

 
 
(27) 

(28) 

(29) 

Filed as an exhibit to the Registrant’s Current Report on Form 8-K for December 11, 2007 filed with the 
Securities and Exchange Commission on December 17, 2007. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for March 18, 2008 filed with the 
Securities and Exchange Commission on March 18, 2008. 
Filed as an exhibit to the Registrant’s Current Report on Form 8-K for March 26, 2008 filed with the 
Securities and Exchange Commission on March 27, 2008. 

 
 
SIGNATURES 

Pursuant to the requirements of Section 13 or 15(d) of the Securities Exchange Act of 1934, the 

registrant has duly caused this report to be signed on its behalf by the undersigned, thereunto duly 
authorized on this 27th day of March, 2008. 

PACIFIC ETHANOL, INC. 

/s/ NEIL M. KOEHLER 

Neil M. Koehler 
President and Chief Executive Officer 

Pursuant to the requirements of the Securities Exchange Act of 1934, this report has been signed 

below by the following persons on behalf of the Registrant and in the capacities and on the dates 
indicated. 

Signature 

Title 

Date 

/s/ WILLIAM L. JONES 
William L. Jones 

/s/ NEIL M. KOEHLER 
Neil M. Koehler 

Chairman of the Board and Director 

March 27, 2008 

President, Chief Executive Officer 
(Principal Executive Officer) and Director 

March 27, 2008 

/s/ JOSEPH W. HANSEN 
Joseph W. Hansen 

Chief Financial Officer (Principal 
Financial and Accounting Officer) 

March 27, 2008 

/s/ TERRY L. STONE 
Terry L. Stone 

/s/ JOHN L. PRINCE 
John L. Prince 

/s/ DOUGLAS L. KIETA 
Douglas L. Kieta 

/s/ LARRY D. LAYNE 
Larry D. Layne 

Director 

Director 

Director 

Director 

March 27, 2008 

March 27, 2008 

March 27, 2008 

March 27, 2008 

 
 
 
 
 
 
 
EXHIBITS FILED WITH THIS REPORT 

Exhibit 
Number  Description 

21.1 

23.1 

31.1 

31.2 

32.1 

Subsidiaries of the Registrant 

Consent of Independent Registered Public Accounting Firm 

Certification Required by Rule 13a-14(a) of the Securities Exchange Act of 1934, as 
amended, as Adopted Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002 

Certification Required by Rule 13a-14(a) of the Securities Exchange Act of 1934, as 
amended, as Adopted Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002 

Certification of Chief Executive Officer and Chief Financial Officer Pursuant to 18 U.S.C. 
Section 1350, as Adopted Pursuant to Section 906 of the Sarbanes-Oxley Act of 2002 

 
 
 
 
 
 
EXHIBIT 21.1 

SUBSIDIARIES OF THE REGISTRANT 

Subsidiary Name 

Names Under Which 
Subsidiary Does Business 

State or Jurisdiction of 
Incorporation or Organization 

Pacific Ethanol California, Inc. 

Pacific Ethanol California 

Kinergy Marketing, LLC 

Pacific Ag. Products, LLC  

Pacific Ethanol Madera LLC 

Kinergy Marketing/Kinergy 

Pacific Ag Products/PAP 

Pacific Ethanol Madera 

Pacific Ethanol Holding Co. LLC 

Pacific Ethanol Holding Co. 

Pacific Ethanol Imperial, LLC 

Pacific Ethanol Stockton LLC 

Pacific Ethanol Columbia, LLC 

Pacific Ethanol Imperial 

Pacific Ethanol Stockton 

Pacific Ethanol Columbia 

Pacific Ethanol Magic Valley, LLC 

Pacific Ethanol Magic Valley 

Pacific Ethanol Plymouth, LLC 

Pacific Ethanol Plymouth 

Stockton Ethanol Receiving Company, LLC 

Stockton Ethanol Receiving Company 

California 

Oregon 

California 

Delaware 

Delaware 

Delaware 

Delaware 

Delaware 

Delaware 

Delaware 

Delaware 

 
 
 
 
 
 
EXHIBIT 23.1 

Consent of Independent Registered Public Accounting Firm 

To the Board of Directors 
Pacific Ethanol, Inc. 
Sacramento, California 

We consent to the incorporation by reference in Registration Statements (Nos. 333-106554, 333-123538 
and 333-137663) on Form S-8 and (Nos. 333-127714, 333-135270, 333-138260, 333-143617 and 333-
147471) on Form S-3 of Pacific Ethanol, Inc. of our reports dated March 27, 2008 relating to our audits of 
the consolidated financial statements and internal control over financial reporting, which appear in this 
Annual Report on Form 10-K of Pacific Ethanol, Inc. for the year ended December 31, 2007. 

Our report dated March 27, 2008, on the effectiveness of internal control over financial reporting as of 
December 31, 2007, expressed an opinion that Pacific Ethanol, Inc. had not maintained effective internal 
control over financial reporting as of December 31, 2007, based on criteria established in Internal 
Control—Integrated Framework issued by the Committee of Sponsoring Organizations of the Treadway 
Commission (COSO). 

/s/ HEIN & ASSOCIATES LLP 

Irvine, California 
March 27, 2008 

 
 
 
 
EXHIBIT 31.1 

I, Neil M. Koehler, certify that: 

CERTIFICATION 

1. I have reviewed this Annual Report on Form 10-K of Pacific Ethanol, Inc.; 

2. Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state 
a material fact necessary to make the statements made, in light of the circumstances under which such statements 
were made, not misleading with respect to the period covered by this report; 

3. Based on my knowledge, the financial statements, and other financial information included in this report, 
fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as 
of, and for, the periods presented in this report; 

4. The registrant’s other certifying officers and I are responsible for establishing and maintaining disclosure 
controls  and  procedures  (as  defined  in  Exchange  Act  Rules  13a-15(e)  and  15d-15(e))  and  internal  control  over 
financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have: 

(a) Designed such disclosure controls and procedures, or caused such disclosure controls and procedures 
to  be  designed  under  our  supervision,  to  ensure  that  material  information  relating  to  the  registrant,  including  its 
consolidated  subsidiaries,  is  made  known  to  us  by  others  within  those  entities,  particularly  during  the  period  in 
which this report is being prepared; 

(b) Designed such internal control over financial reporting, or caused such internal control over financial 
reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial 
reporting  and  the  preparation  of  financial  statements  for  external  purposes  in  accordance  with  generally  accepted 
accounting principles; 

(c)  Evaluated  the  effectiveness  of  the  registrant’s  disclosure  controls  and  procedures  and  presented  in 
this  report  our  conclusions  about  the  effectiveness  of  the  disclosure  controls  and  procedures,  as  of  the  end  of  the 
period covered by this report based on such evaluation; and 

(d) Disclosed in this report any change in the registrant’s internal control over financial reporting that 
occurred  during  the  registrant’s  most  recent  fiscal  quarter  (the  registrant’s  fourth  fiscal  quarter  in  the  case  of  an 
annual  report)  that  has  materially  affected,  or  is  reasonably  likely  to  materially  affect,  the  registrant’s  internal 
control over financial reporting. 

5.  The  registrant’s  other  certifying  officer(s)  and  I  have  disclosed,  based  on  our  most  recent  evaluation  of 
internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board 
of directors (or persons performing the equivalent functions): 

(a)  All  significant  deficiencies  and  material  weaknesses  in  the  design  or  operation  of  internal  control 
over  financial  reporting  which  are  reasonably  likely  to  adversely  affect  the  registrant’s  ability  to  record,  process, 
summarize and report financial information; and 

(b)  Any  fraud,  whether  or  not  material,  that  involves  management  or  other  employees  who  have  a 

significant role in the registrant’s internal control over financial reporting. 

Date: March 27, 2008 

/s/ NEIL M. KOEHLER 

Neil M. Koehler 
President and Chief Executive Officer (Principal 

Executive Officer) 

 
 
 
EXHIBIT 31.2 

I, Joseph W. Hansen, certify that: 

CERTIFICATION 

1. I have reviewed this Annual Report on Form 10-K of Pacific Ethanol, Inc.; 

2. Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state 
a material fact necessary to make the statements made, in light of the circumstances under which such statements 
were made, not misleading with respect to the period covered by this report; 

3. Based on my knowledge, the financial statements, and other financial information included in this report, 
fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as 
of, and for, the periods presented in this report; 

4. The registrant’s other certifying officers and I are responsible for establishing and maintaining disclosure 
controls  and  procedures  (as  defined  in  Exchange  Act  Rules  13a-15(e)  and  15d-15(e))  and  internal  control  over 
financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have: 

(a) Designed such disclosure controls and procedures, or caused such disclosure controls and procedures 
to  be  designed  under  our  supervision,  to  ensure  that  material  information  relating  to  the  registrant,  including  its 
consolidated  subsidiaries,  is  made  known  to  us  by  others  within  those  entities,  particularly  during  the  period  in 
which this report is being prepared; 

(b) Designed such internal control over financial reporting, or caused such internal control over financial 
reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial 
reporting  and  the  preparation  of  financial  statements  for  external  purposes  in  accordance  with  generally  accepted 
accounting principles; 

(c)  Evaluated  the  effectiveness  of  the  registrant’s  disclosure  controls  and  procedures  and  presented  in 
this  report  our  conclusions  about  the  effectiveness  of  the  disclosure  controls  and  procedures,  as  of  the  end  of  the 
period covered by this report based on such evaluation; and 

(d) Disclosed in this report any change in the registrant’s internal control over financial reporting that 
occurred  during  the  registrant’s  most  recent  fiscal  quarter  (the  registrant’s  fourth  fiscal  quarter  in  the  case  of  an 
annual  report)  that  has  materially  affected,  or  is  reasonably  likely  to  materially  affect,  the  registrant’s  internal 
control over financial reporting. 

5.  The  registrant’s  other  certifying  officer(s)  and  I  have  disclosed,  based  on  our  most  recent  evaluation  of 
internal control over financial reporting, to the registrant’s auditors and the audit committee of the registrant’s board 
of directors (or persons performing the equivalent functions): 

(a)  All  significant  deficiencies  and  material  weaknesses  in  the  design  or  operation  of  internal  control 
over  financial  reporting  which  are  reasonably  likely  to  adversely  affect  the  registrant’s  ability  to  record,  process, 
summarize and report financial information; and 

(b)  Any  fraud,  whether  or  not  material,  that  involves  management  or  other  employees  who  have  a 

significant role in the registrant’s internal control over financial reporting. 

Date: March 27, 2008 

/s/ JOSEPH W. HANSEN 

Joseph W. Hansen 
Chief Financial Officer (Principal Financial and 

Accounting Officer) 

 
 
EXHIBIT 32.1 

CERTIFICATIONS OF CHIEF EXECUTIVE OFFICER AND CHIEF FINANCIAL OFFICER  
PURSUANT TO 18 U.S.C. SECTION 1350,  
AS ADOPTED PURSUANT TO 
SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002 

In  connection  with  the  Annual  Report  on  Form  10-K  of Pacific  Ethanol,  Inc.  (the “Company”)  for  the 
year  ended  December  31,  2007  (the  “Report”),  the  undersigned  hereby  certify  in  their  capacities  as  Chief 
Executive  Officer  and  Chief  Financial  Officer  of  the  Company,  respectively,  pursuant  to  18  U.S.C.  section 
1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, that, to their knowledge: 

1. the Report fully complies with the requirements of Section 13(a) or 15(d) of the Securities Exchange 

Act of 1934, as amended; and 

2. the information contained in the Report fairly presents, in all material respects, the financial condition 

and results of operations of the Company. 

Date:  March 27, 2008 

Date:  March 27, 2008 

By:  /s/ NEIL M. KOEHLER 
   Neil M. Koehler 
   Chief Executive Officer 

(Principal Executive Officer) 

By:  /s/ JOSEPH W. HANSEN 

Joseph W. Hansen 

   Chief Financial Officer (Principal Financial and 

Accounting Officer) 

A  signed  original  of  this  written  statement  required  by  Section  906,  or  other  document  authenticating, 
acknowledging, or otherwise adopting the signatures that appear in typed form within the electronic version of 
this written statement required by Section 906, has been provided to the Company and will be retained by the 
Company and furnished to the Securities and Exchange Commission or its staff upon request.