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Piper Jaffray Companies

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FY2006 Annual Report · Piper Jaffray Companies
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2006 Annual Report

Piper Jaffray Companies

Sector Expertise · Product Depth · Geographic Reach

o u r   g u i d i n g   p r i n c i p l e s

We create and implement superior financial solutions for our clients. 
Serving clients is our fundamental purpose.
•
We earn our clients’ trust by delivering the best guidance and service.
•
Great people are our competitive advantage.
•
As we serve, we are committed to these core values:

Always place our clients’ interests first.

Conduct ourselves with integrity and treat others with respect. 

Work in partnership with our clients and each other. 

Maintain a high-quality environment that attracts, retains and develops the best people. 

Contribute our talents and resources to serve the communities in which we live and work.

Andrew S. Duff – Chairman and Chief Executive Officer

To our shareholders,

FOCUS. It is integral to our strategy and to
our ongoing success. In 2006, we set a new
strategy for the firm, and we are confident
this focused plan will create exceptional
solutions for our clients and long-term value
for our shareholders.

FOCUS ON  2006: A Redefining Year
During the year, we aligned the entire firm
toward growing our capital markets business.
To facilitate this strategy, we sold our Private
Client Services branch network—the result 
of a thorough and disciplined analysis of our
strengths and growth opportunities.

Our mission is to build the leading
international middle market investment bank
and institutional securities firm. Proceeds
from the sale have provided the means to
recapitalize our company, as well as to invest
further in our business. 

1

FINANCIAL  HIGHLIGHTS

Years ended December 31
(Amounts in thousands)

Revenues

Investment banking
Institutional brokerage
Interest
Other income

Total revenues
Interest expense

Net revenues

Non-Interest expenses

Compensation and benefits
Cash award program
Restructuring-related expense
Other non-compensation expense

Total non-interest expenses

Income from continuing operations

before income tax expense

Income tax expense

Net income from continuing operations

Discontinued operations:

2006
$ 294,808
162,406
63,969
14,054

535,237
32,303

502,934

291,265
2,980
-
110,816

405,061

97,873
34,974

62,899

2005
243,347
162,068
44,857
3,530

453,802
32,494

421,308

243,833
4,205
8,595
128,644

385,277

36,031
10,863

25,168

2004
227,667
179,604
35,718
13,638

456,627
22,421

434,206

251,187
4,717
-
129,264

385,168

49,038
16,727

32,311

Income from discontinued operations, net of tax

172,354

14,915

18,037

Net income

$ 235,253

$40,083

$50,348

*All from continuing operations.

#2006 net income, pretax operating margin and earnings per common share included a benefit of $13.1 million, 
420 basis points and $0.69, respectively, due to a reduction of litigation reserves related to a development in a particular
industry-wide litigation matter.

2

$3.32$1.32$1.6719.5%8.6%11.3%$63$25$32$503$421$434‘06‘05‘04‘06‘05‘04‘06‘05‘04‘06‘05‘04Net revenues*In millionsNet income*#In millionsPretax operating margin*#Earnings per common share*#DilutedOur sharpened focus has already translated
into results. In 2006, our net revenues 
from continuing operations were up 
19 percent. The combination of strong
revenues, disciplined expense management
and our recapitalization actions drove 
an improvement in 2006 pretax operating
margin from continuing operations.

In 2006, our investment banking services
continued to gain momentum. We were the
most active underwriter of growth companies
(less than $1 billion in market value) for IPOs,
follow-ons and convertibles. We were also at
the forefront in the emerging alternative
energy/clean technology sector, where we
managed more public equity offerings than
any other investment bank. Our public finance
team completed 452 issues with a total par
value of $6.6 billion, representing a 9 percent
increase over 2005 par value. 

Going forward, we will grow our business 
by focusing on three specific initiatives:
deepening expertise in select sectors,
broadening our product offerings to serve

Jon W. Salveson–Head of Investment Banking

clients’ full business lifecycle needs, and
extending our geographic reach to serve
clients in an increasingly international market. 

Capital Markets Leadership*
Since 1/1/04

No. 1: Consumer
Equity Underwriter
Piper Jaffray – 45 transactions

No. 1: Health Care
Underwriter: Issuers < $2 billion 
in market value
Piper Jaffray – 82 transactions

No. 1: Technology
IPO Underwriter
Piper Jaffray – 41 transactions

*Source: Dealogic

FOCUS  ON  SECTORS 
Our concentration on targeted sectors reflects
our disciplined approach to developing deep
expertise in competitive, fast-changing and
high-growth industries. By building sector
expertise in our investment banking, sales
and trading, and research teams, we are
better positioned to address the unique
industry-specific needs of clients operating
and investing in these sectors. 

Our research and transaction rankings in
areas such as health care, consumer,
technology, and state and local government,
exemplify our ability to succeed where we
focus. To build on that strength, we added
new sectors to our roster in 2006,
developing expertise in targeted areas with
the same commitment as in our established
sectors. These new sectors, plus continued
investment in our established areas, provide
a strong growth platform for our capital
markets business. 

3

Sector Expertise 
· Aircraft Finance
· Alternative Energy
· Business Services
· Consumer
· Education
· Financial Institutions
· Health Care
· Hospitality
· Real Estate
· Industrial Growth
· State and Local Government · Technology

Among our new targeted sectors is
alternative energy—a high-growth and high-
profile industry where we see significant
long-term potential. Hospitality finance is
also a recent addition where we structure
and underwrite tax-exempt hotel and
covention center financings for our clients. 

2006 Fixed Income Rankings*

No. 4 
for new long-term municipal issues

No. 4 
for senior manager 
of health care/hospital issues

No. 1 
municipal underwriter in Midwest

*Source: Thomson Financial

Frank E. Fairman–Head of Public Finance Services 

Our expertise in the hospitality sector 
was instrumental in helping our client, 
Austin Convention Enterprises Inc., 
achieve significant savings—approximately
$90 million in present value—when
restructuring its existing $260 million 
debt portfolio in 2006.

Austin Convention Enterprises Inc. owns 
the Austin Convention Center, an 800-room
upscale hotel adjacent to the convention
center in downtown Austin, Texas. 
Piper Jaffray originally served as sole
underwriter on the corporation’s initial 
$245 million financing in 2001. Since then,
we worked closely with the client to
determine the appropriate timing for a debt
restructuring—basing the move on the strong
performance of the hotel and convention
center, current interest rates, and the
willingness of the 2001 subordinate bond
insurer to participate in the transaction.

The December 2006 bond restructuring
included both first- and second-tier 
revenue refunding bonds. The resulting
economic benefit for Austin Convention
Enterprises, Inc. illustrates the value that can
be created by linking deep client knowledge
with sector insights.

4

Product Depth
· Investment banking
· Mergers and acquisitions
· Equity and debt capital markets
· High-yield and structured products
· Institutional equity sales and trading
· Tax-exempt and taxable sales and trading
· Investment research

In 2006, our product breadth benefited 
our client, American Medical Systems (AMS),
when it acquired Laserscope, a developer 
of medical lasers for the urology and
aesthetics markets.

In this transaction, we served as the exclusive
M&A advisor to AMS and capitalized on our
strategic alliance with CIT Group, providing
$600 million of senior debt. In addition, our
debt capital markets group led and
syndicated a $180 million subordinated
bridge facility. Between the announcement
and closing of the transaction, our
convertibles team executed a $375 million
convertible debt issue. 

Finally, we advised AMS on the successful
divestiture of the laser aesthetics assets of
Laserscope. Our work as a primary advisor
to AMS demonstrates the value we can bring
to clients by combining deep expertise and
product capabilities.

5

Thomas P. Schnettler –Vice Chairman and 

Chief Financial Officer

FOCUS ON  PRODUCTS
In 2006, we added several new products to
our mix, further enhancing our ability to
offer the right solutions to clients as they
move through various business lifecycles,
financing situations and market conditions.

To enhance our credit capability, we
established a strategic alliance with CIT
Group Inc. This alliance offers middle market
companies a comprehensive set of financing
solutions, including senior-secured and
unsecured debt, second-lien facilities,
subordinated financings and mezzanine loans. 

We also added a financial restructuring team
to advise financially stressed and distressed
companies. This team strengthens our
product platform by offering solutions clients
may need during non-growth cycles. A more
comprehensive product mix also helps us by
diversifying our revenue streams for different
types of market conditions.

Geographic Reach
· Piper Jaffray has offices in 20 principal U.S.
locations, the United Kingdom and China. 
See the listing on page 8.

To advise clients effectively on a global 
scale, we must be able to do business
wherever our clients access and invest capital
and provide a proprietary perspective on
international markets.

Since 2001, our consumer research team has
been administering multi-city tours of U.S. and
Canadian shopping malls and retail outlets,
conducting proprietary research on teen
spending habits and retail brand perceptions.

In 2006, the team expanded its research with
tours of retail operations in Spain and Italy,
providing corporate and institutional clients
with an international perspective on the
retail market not available elsewhere.

This type of industry-leading international
research provides our clients unparalleled and
proprietary analysis and has served as a catalyst
for our organic growth in the consumer sector
both in the United States and Europe.

U.K. Biotech Leadership*

Piper Jaffray Ltd. lead managed follow-on 
transactions that accounted for 81 percent 
of the equity raised for biotechnology companies
in the U.K. in 2006.

*Source: Piper Jaffray Ltd. 

FOCUS ON  GEOGRAPHY
We are experiencing increased international
opportunity for our expertise and products,
and we plan to meet this demand through
disciplined expansion in targeted
international markets where our clients
access and invest capital. 

Our international growth gained significant
momentum in 2006, with major milestones
in both Europe and Asia. In our London-
based subsidiary, Piper Jaffray Ltd., we
doubled the size of our investment banking
group and added consumer and technology
capabilities to complement our industry-
leading expertise in health care. 

We opened an office in Shanghai to provide
international investment banking and research
services in Asia. Our investment banking
practice in China has already established a
track record for successfully taking Chinese
technology companies public in the U.S.
markets. We intend to build on this
foundation in China by extending our
expertise into additional products and sectors.

James L. Chosy – General Counsel and Secretary

6

FOCUS ON  GUIDING  PRINCIPLES
Throughout 2006, we maintained a steady
focus on our Guiding Principles, reinforcing
our commitment to our core values amid the
significant strategic change. We will succeed
by always placing our clients’ interests first
and creating an environment and business
platform that enable us to attract and retain
the best employees.

As a firm and as individual leaders, we
contribute our talents and resources to build
and to serve our communities. Annually, the
firm donates 5 percent of pretax earnings
through a combination of cash contributions,
in-kind contributions and volunteer hours.

Thank you to our clients for placing your
trust in us, to our shareholders for supporting
our vision, and to our employees for your
commitment to our future. Together—and
with focus—we will grow our capital markets
business and build the leading international
middle market investment bank and
institutional securities firm. 

Sincerely,

Andrew S. Duff
Chairman and Chief Executive Officer
Piper Jaffray Companies

7

Executive Leadership

Andrew S. Duff
Chairman and Chief Executive Officer 

Thomas P. Schnettler 
Vice Chairman and Chief Financial Officer

Jon W. Salveson
Head of Investment Banking 

Robert W. Peterson
Head of Equities

Benjamin T. May 
Head of High-Yield and Structured Products

Frank E. Fairman
Head of Public Finance Services 

James L. Chosy
General Counsel and Secretary

R. Todd Firebaugh
Chief Administrative Officer

Board of Directors

Andrew S. Duff
Chairman and Chief Executive Officer 
Piper Jaffray Companies

Addison (Tad) L. Piper
Retired
Former Chairman and Chief Executive Officer
Piper Jaffray Companies Inc.

Michael R. Francis
Executive Vice President of Marketing
Target Corporation

B. Kristine Johnson
President
Affinity Capital Management

Samuel L. Kaplan
Partner and Founding Member
Kaplan, Strangis and Kaplan, P.A.

Frank L. Sims
Corporate Vice President
Transportation and Product Assurance
Cargill, Inc.

Jean M. Taylor
President and Chief Executive Officer
Taylor Corporation

8

Principal Office Locations
Minneapolis, MN (headquarters)

Austin, TX
Boston, MA
Charlotte, NC
Chicago, IL
Denver, CO
Des Moines, IA
Houston, TX
Kansas City, KS
Los Angeles, CA
Milwaukee, WI
Nashville, TN
New York, NY
Palo Alto, CA
Phoenix, AZ
Portland, OR
Sacramento, CA
San Francisco, CA
Seattle, WA
St. Louis, MO

London, United Kingdom
Shanghai, China

Piper Jaffray Companies

SELECTED FINANCIAL DATA

The following table presents our selected consolidated
financial data for the periods and dates indicated. The
information set forth below should be read in conjunc-
tion with “Management’s Discussion and Analysis of

FOR THE YEAR ENDED DECEMBER 31,

(Dollars and shares in thousands, except per share data)

Financial Condition and Results of Operations” and
statements and notes
our consolidated financial
thereto.

2006

2005

2004

2003

2002

Revenues:

Investment banking
Institutional brokerage
Interest
Other income

Total revenues
Interest expense

Net revenues

Non-interest expenses:

Compensation and benefits
Cash award program
Regulatory settlement
Merger and restructuring
Royalty fee
Other

Total non-interest expenses

Income/(loss) from continuing operations before income

tax expense/(benefit)
Income tax expense/(benefit)

Net income/(loss) from continuing operations

Discontinued operations:

Income from discontinued operations, net of tax

Net income

Earnings per basic common share

Income/(loss) from continuing operations
Income from discontinued operations

Earnings per basic common share

Earnings per diluted common share

Income/(loss) from continuing operations
Income from discontinued operations

Earnings per diluted common share
Weighted average number of common shares

Basic
Diluted
Other data

Total assets
Long-term debt
Shareholders’ equity
Total employees

$ 294,808
162,406
63,969
14,054

$ 243,347
162,068
44,857
3,530

$ 227,667
179,604
35,718
13,638

$ 197,966
209,230
27,978
10,327

$ 181,516
171,231
37,119
4,929

535,237
32,303

502,934

291,265
2,980
–
–
–
110,816

405,061

97,873
34,974

62,899

172,354

$ 235,253

$

$

$

$

3.49
9.57

13.07

3.32
9.09

12.40

18,002
18,968

453,802
32,494

456,627
22,421

445,501
16,476

394,795
28,487

421,308

434,206

429,025

366,308

243,833
4,205
–
8,595
–
128,644

251,187
4,717
–
–
–
129,264

246,868
24,000
–
–
3,911
123,411

205,925
–
32,500
7,976
7,482
123,370

385,277

385,168

398,190

377,253

36,031
10,863

25,168

49,038
16,727

32,311

30,835
10,176

20,659

(10,945)
(2,392)

(8,553)

14,915

18,037

5,340

8,659

$

40,083

$

50,348

$

25,999

$

106

$

$

$

$

1.34
0.79

2.13

1.32
0.78

2.10

$

$

$

$

1.67
0.93

2.60

1.67
0.93

2.60

$

$

$

$

1.07
0.28

1.35

1.07
0.28

1.35

$

$

$

$

(0.45)
0.45

0.01

(0.45)
0.45

0.01

18,813
19,081

19,333
19,399

19,237
19,237

19,160
19,160

$1,851,847
$
–
$ 924,439
1,108

$2,354,191
$ 180,000
$ 754,827
2,871

$2,828,257
$ 180,000
$ 725,428
3,027

$2,380,647
$ 180,000
$ 669,795
2,991

$2,032,452
$ 215,000
$ 609,857
3,227

Piper Jaffray Annual Report 2006

9

Management’s Discussion and Analysis of Financial Condition and Results of Operations

MANAGEMENT’S DISCUSSION AND ANALYSIS OF FINANCIAL

CONDITION AND RESULTS OF OPERATIONS

The following information should be read in conjunc-
tion with the accompanying consolidated financial
statements and related notes and exhibits included
elsewhere in this report. Certain statements in this
report may be considered forward-looking. Statements
that are not historical or current facts, including state-
ments about beliefs and expectations, are forward-
looking statements. These forward looking statements
include, among other things, statements other than
historical information or statements of current condi-
tion and may relate to our future plans and objectives
and results, and also may include our belief regarding
the effect of various legal proceedings, as set forth
under “Legal Proceedings” in Part I, Item 3 of this
Form 10-K. Forward-looking statements involve inher-
ent risks and uncertainties, and important factors could
cause actual results to differ materially from those
anticipated, including those factors discussed below
under “External Factors Impacting Our Business” as
well as the factors identified under “Risk Factors” in
Part 1, Item 1A of our Annual Report on Form 10-K for
the year ended December 31, 2006, as updated in our
subsequent reports filed with the SEC. These reports
are available at our Web site at www.piperjaffray.com
and at the SEC Web site at www.sec.gov. Forward-
looking statements speak only as of the date they are
made, and we undertake no obligation to update them
in light of new information or future events.

Executive Overview

Our continuing operations are principally engaged in
providing investment banking, institutional brokerage
and related financial services to middle-market corpo-
rations, private equity groups, public entities, non-
profit entities and institutional investors in the United
States, Europe and Asia. Our revenues are generated
primarily through the receipt of advisory and financing
fees earned on investment banking activities, commis-
sions and sales credits earned on equity and fixed
income institutional sales and trading activities, net
interest earned on securities inventories and profits
and losses from trading activities related to these secu-
rities inventories.

The securities business is a human capital business;
accordingly, compensation and benefits comprise the
largest component of our expenses, and our perfor-
mance is dependent upon our ability to attract, develop
and retain highly skilled employees who are motivated

and committed to provide the highest quality of service
and guidance to our clients.

Our discontinued operations include the operating
results of our Private Client Services (“PCS”) retail
brokerage business, the gain on the sale of the PCS
branch network and related restructuring and transac-
tion costs. We closed on the sale of our PCS branch
network and certain related assets to UBS Financial
Services, Inc., a subsidiary of UBS AG (“UBS”), on
August 11, 2006. Our PCS retail brokerage business
provided financial advice and a wide range of financial
products and services to individual investors through a
network of approximately 90 branch offices. We
received $500 million for the sale of the branch net-
work and approximately $250 million for the net assets
of the branch network, consisting principally of cus-
tomer margin receivables. The sale resulted in after-tax
proceeds of approximately $510 million and an after-
tax book gain for the year ended December 31, 2006 of
$165.6 million, net of restructuring and transaction
charges. We expect to incur additional restructuring
costs in the first and second quarters of 2007 related to
a system conversion, resulting from the sale of the PCS
branch network.

Our divestiture of the PCS branch network had a
material impact on our results of operations and finan-
cial condition. The majority of our customer receiv-
ables and payables were eliminated,
stock loan
liabilities that helped finance customer receivables were
repaid, we wrote-off goodwill related to the PCS busi-
ness of $85.6 million, and we significantly changed our
capitalization structure by repaying $180 million in
subordinated debt and repurchasing approximately
1.6 million common shares through an accelerated
share repurchase in the amount of $100 million. In
addition, certain equity awards held by PCS employees
were forfeited upon the employees’ transfer to UBS,
and certain equity awards held by severed employees
were vested on an accelerated basis. As discussed
above, the results of our PCS business operations,
the gain on the sale of our PCS branch network and
the related restructuring and transaction costs have
been classified within discontinued operations with
prior period PCS results of operations reclassified to
discontinued operations for a comparable presenta-
tion. See Notes 4 and 16 to our consolidated financial
statements for a further discussion of our discontinued
operations and restructuring.

10

Piper Jaffray Annual Report 2006

Management’s Discussion and Analysis of Financial Condition and Results of Operations

As part of our growth strategy, we have increased the
number of business sectors and industries in which we
specialize,
enhanced our product offerings and
expanded the geographic reach of our services to better
our customers. Within the corporate sector we have
traditionally operated in the health care, technology,
financial institutions, consumer and aircraft finance
sectors. In 2006, we expanded into the alternative
energy, business services and industrial growth sectors
to serve our corporate clients. In addition, we have
expanded our fixed income financing capabilities to
provide services to the hospitality and commercial real
estate industries. In the third quarter of 2006, as part of
our efforts to enhance our product offerings, we
announced a strategic relationship with CIT Group,
Inc. (“CIT”) to offer middle-market companies a com-
prehensive set of financing solutions. Additionally, in
2006, we expanded our high-yield and structured prod-
ucts capability and added a corporate financial restruc-
turing team to assist distressed corporations. We
strengthened our international presence in 2006 by
significantly increasing the size of the team in our
London office and opening an office in Shanghai.

We plan to continue our focus on the growth of our
existing capital markets businesses through sector
expertise, product depth and geographic reach. In addi-
tion, as opportunities arise we intend to use our capital
to a greater extent to facilitate customer activity and
engaging in principal activities that leverage our exper-
tise. Our principal activities will result in greater com-
mitments of capital on our own behalf, and may

MARKET DATA
The following table provides a summary of relevant
market data over the past three years.

include, among other things, proprietary positions in
equity or debt securities of public and private compa-
nies. Our growth initiatives will require investments in
personnel and other expenses, which may have a short-
term negative impact on our profitability as it may take
time to develop meaningful revenues from the growth
initiatives. We also may pursue new businesses that
support our strategic priorities.

RESULTS FOR THE YEAR ENDED DECEMBER 31, 2006

Our full year performance reflects revenue growth and
improved profitability. For the year ended Decem-
ber 31, 2006, our net income, including continuing
and discontinued operations, was $235.3 million, or
$12.40 per diluted share, up from net income of
$40.1 million, or $2.10 per diluted share, for the prior
year. Net income in 2006 included $165.6 million, after
tax and net of restructuring and transaction costs,
related to the gain on the sale of the PCS branch
network and certain related assets to UBS. For 2006,
totaled
net
$62.9 million, or $3.32 per diluted share, up from
net income of $25.2 million, or $1.32 per diluted share,
in 2005. Net income from continuing operations in
2006 included a benefit of $0.69 per diluted share,
resulting from a reduction of a litigation reserve related
to developments in a specific industry-wide litigation
matter. Net revenues from continuing operations for
the year ended December 31, 2006 were $502.9 mil-
lion, up 19.4 percent from $421.3 million in the prior
year.

from continuing operations

income

YEAR ENDED DECEMBER 31,

2006

2005

2004

Dow Jones Industrials a
NASDAQ a
NYSE Average Daily Value Traded ($ BILLIONS)
NASDAQ Average Daily Value Traded ($ BILLIONS)
Mergers and Acquisitions (NUMBER OF TRANSACTIONS) b
Public Equity Offerings (NUMBER OF TRANSACTIONS) c e
Initial Public Offerings (NUMBER OF TRANSACTIONS) c
Managed Municipal Underwritings (NUMBER OF TRANSACTIONS) d
Managed Municipal Underwritings (VALUE OF TRANSACTIONS IN BILLIONS) d
10-Year Treasuries Average Rate

3-Month Treasuries Average Rate

(a) Data provided is at period end.

(b) Source: Securities Data Corporation.

(c) Source: Dealogic (offerings with reported market value greater than $20 million).

(d) Source: Thomson Financial.
(e) Number of transactions includes convertible offerings.

12,463

2,415

$ 68.3
$ 46.5

10,685

857
165

12,553

$ 383.8

4.79%

4.73%

2006
v 2005

2005
v 2004

16.3% (0.6)%

10,718

2,205

$ 56.1
$ 39.5

8,818

775
170

10,783

2,175

$ 46.1
$ 34.6

8,188

1,005
214

9.5

21.7
17.7

21.2

10.6
(2.9)

13,948

13,605

(10.0)

$ 408.3

4.29%

3.15%

$ 359.7

(6.0)
4.27% 11.7

1.37% 50.2

129.9

1.4

21.7
14.2

7.7

(22.9)
(20.6)

2.5

13.5
0.5

Piper Jaffray Annual Report 2006

11

Management’s Discussion and Analysis of Financial Condition and Results of Operations

EXTERNAL FACTORS IMPACTING OUR BUSINESS

Performance in the financial services industry in which
we operate is highly correlated to the overall strength of
economic conditions and financial market activity.
Overall market conditions are a product of many fac-
tors, which are mostly unpredictable and beyond our
control. These factors may affect the financial decisions
made by investors, including their level of participation
in the financial markets. In turn, these decisions may
affect our business results. With respect to financial
market activity, our profitability is sensitive to a variety
of factors, including the volume and value of trading in
securities, the volatility of the equity and fixed income
markets, the level and shape of various yield curves,
and the demand for investment banking services as
reflected by the number and size of equity and debt
financings and merger and acquisition transactions.

Factors that differentiate our business within the finan-
cial services industry also may affect our financial
results. For example, our business focuses primarily
on middle market companies in specific industry sec-
tors. These sectors may experience growth or down-
turns independently of general economic and market
conditions, or may face market conditions that are
disproportionately better or worse than those impact-
ing the economy and markets generally. In either case,
our business could be affected differently than overall
market trends. Given the variability of the capital mar-
kets and securities businesses, our earnings may fluc-
tuate significantly from period to period, and results of
any individual period should not be considered indic-
ative of future results.

12

Piper Jaffray Annual Report 2006

Management’s Discussion and Analysis of Financial Condition and Results of Operations

Results of Operations

FINANCIAL SUMMARY

The following table provides a summary of the results of our operations and the results of our operations as a
percentage of net revenues for the periods indicated.

FOR THE YEAR ENDED DECEMBER 31,

(Dollars in thousands)

Revenues:

Investment banking

Institutional brokerage

Interest
Other income

Total revenues

Interest expense

Net revenues

Non-interest expenses:

Compensation and benefits

Occupancy and equipment

Communications
Floor brokerage and clearance

Marketing and business development

Outside services
Cash award program

Restructuring-related expense

Other operating expenses

Income from continuing operations

before income tax expense

Income tax expense

Net income from continuing operations

Discontinued operations:

Income from discontinued operations,

net of tax

Net income

N/M — Not Meaningful

2006

2005

2004

2006
v 2005

2005
v 2004

2006

2005

2004

AS A PERCENTAGE OF
NET REVENUES
FOR THE YEAR ENDED
DECEMBER 31,

$294,808

162,406

63,969
14,054

535,237

32,303

502,934

$243,347

$227,667

21.1%

6.9%

162,068

179,604

44,857
3,530

35,718
13,638

453,802

456,627

32,494

22,421

0.2

42.6
298.1

17.9

(0.6)

(9.8)

25.6
(74.1)

(0.6)

44.9

421,308

434,206

19.4

(3.0)

58.6% 57.8% 52.4%
32.3
38.5

41.4

12.7
2.8

106.4

6.4

100.0

10.6
0.8

8.2
3.2

107.7

105.2

7.7

5.2

100.0

100.0

291,265

243,833

251,187

30,660

23,189
13,292

24,731

28,053
2,980

–

(9,109)

30,808

23,987
14,785

21,537

23,881
4,205

8,595

13,646

28,581

24,757
14,017

24,660

20,378
4,717

–

19.5

(0.5)

(3.3)
(10.1)

14.8

17.5
(29.1)

N/M

(2.9)

7.8

(3.1)
5.5

(12.7)

17.2
(10.9)

N/M

16,871

N/M (19.1)

97,873

34,974

62,899

36,031

10,863

49,038

16,727

171.6

222.0

(26.5)

(35.1)

25,168

32,311

149.9

(22.1)

57.9

57.9

57.8

6.1

4.6
2.6

4.9

5.6
0.6

–

(1.8)

80.5

19.5

7.0

12.5

7.3

5.7
3.5

5.1

5.7
1.0

2.0

3.2

6.6

5.7
3.2

5.7

4.7
1.1

–

3.9

91.4

88.7

8.6

2.6

6.0

11.3

3.9

7.4

172,354

$235,253

14,915

18,037

1055.6

(17.3)

34.3

3.5

4.2

$ 40,083

$ 50,348

486.9% (20.4)%

46.8% 9.5% 11.6%

Total non-interest expenses

405,061

385,277

385,168

5.1

0.0

For the year ended December 31, 2006, net income,
including continuing and discontinued operations,
totaled $235.3 million, which included a gain of
$165.6 million, after-tax and net of restructuring and
transaction costs, from the sale of our PCS branch
network. Net revenues from continuing operations
increased to $502.9 million for 2006, an increase of
19.4 percent from the prior year. In 2006, investment
banking revenues increased 21.1 percent to $294.8 mil-
lion, compared with revenues of $243.3 million in the
prior year. This increase was primarily attributable to

higher equity financing activity. Institutional brokerage
revenues remained essentially flat when compared with
the prior-year period. In 2006, net interest income
increased to $31.7 million, compared with $12.4 million
in 2005. The increase was driven by two primary factors.
First, in the third quarter of 2006, we repaid $180 million
in subordinated debt and paid down other short-term
financing with proceeds from the sale of the PCS branch
network, which reduced interest expense. Second, dur-
ing the third and fourth quarters of 2006, we invested
the excess proceeds from the sale in short-term interest

Piper Jaffray Annual Report 2006

13

Management’s Discussion and Analysis of Financial Condition and Results of Operations

bearing instruments, which generated interest income. In
2006, other income increased to $14.1 million, com-
pared with $3.5 million in 2005, primarily due to a
$9.9 million gain related to our ownership of two seats
on the New York Stock Exchange, which were
exchanged for cash and restricted shares of common
stock of the NYSE Group, Inc. We sold approximately
65 percent of our NYSE Group, Inc. restricted shares in a
secondary offering during the second quarter of 2006.
Non-interest expenses increased to $405.1 million in
2006, from $385.3 million in 2005. This increase was
attributable to increased variable compensation and
benefits expenses due to higher profitability, offset in
part by a reduction in litigation reserves related to devel-
opments in a specific industry-wide litigation matter and
an $8.6 million restructuring charge taken in 2005.

including continuing and discontinued
Net income,
operations, was $40.1 million for the year ended Decem-
ber 31, 2005, down from $50.3 million for the year
ended December 31, 2004. In 2005, net revenues from
continuing operations were $421.3 million, a decline of
3.0 percent from the prior year. In 2005, investment
banking revenues increased to $243.3 million compared
with $227.7 million in 2004, driven by higher advisory
services activity associated with merger and acquisition
transactions. Institutional brokerage revenues decreased
9.8 percent from 2004 due primarily to significant
declines in fixed income volumes, lower spreads on fixed
income products due to the NASD’s Trade Reporting
and Compliance Engine (“TRACE”) requirements and
reduced equity sales and trading revenues. In 2005, other
income decreased to $3.5 million, compared with
$13.6 million in 2004. This decrease was due to higher
gains recorded on private equity investments in 2004.
Also, 2004 included revenues associated with our ven-
ture capital business, the management of which was
transitioned to an independent company effective
December 31, 2004. Non-interest expenses were
$385.3 million in 2005, flat compared to 2004. Com-
pensation and benefits expenses declined due to lower
revenues and profitability. Non-compensation expenses
increased due to an $8.6 million restructuring charge
taken in the second quarter of 2005 in connection with
certain expense reduction measures.

CONSOLIDATED NON-INTEREST EXPENSES

Compensation and Benefits – Compensation and benefits
expenses, which are the largest component of our
expenses, include salaries, commissions, bonuses, ben-
efits, employment taxes and other employee costs. A
substantial portion of compensation expense is com-
prised of variable incentive arrangements, including
discretionary bonuses, the amount of which fluctuates

14

Piper Jaffray Annual Report 2006

in proportion to the level of business activity, increasing
with higher revenues and operating profits. Other com-
pensation costs, primarily base salaries and benefits,
are more fixed in nature. The timing of bonus pay-
ments, which generally occur in February, have a
greater impact on our cash position and liquidity, than
is reflected in our statements of operations.

In 2006, compensation and benefits expenses increased
19.5 percent to $291.3 million, from $243.8 million in
2005. This increase was due to higher variable com-
pensation costs resulting from increased profitability.
Compensation and benefits expenses as a percentage of
net revenues were flat at 57.9 percent for 2006 and
2005.

Compensation and benefits expenses decreased 2.9 per-
cent to $243.8 million in 2005, from $251.2 million in
2004. The decrease was attributable to lower net rev-
enues and profitability and the savings from the
restructuring actions taken in the second quarter of
2005. Compensation and benefits expenses as a per-
centage of net revenues were essentially flat at 57.9 per-
cent for 2005, compared to 57.8 percent for 2004.

Occupancy and Equipment – In 2006, occupancy and
equipment expenses were $30.7 million, essentially flat
when compared with 2005. In the fourth quarter of
2006, we entered into a new lease contract related to
our London office and exited our existing lease. As a
result, we incurred approximately $1.2 million in the
fourth quarter related to early exit penalties and lease-
hold write-offs. Offsetting this expense was a decline in
depreciation related to prior investments in technology
becoming fully depreciated in the first quarter of 2006.

In 2005, occupancy and equipment expenses were
$30.8 million, compared with $28.6 million in the
prior year. Increased costs associated with additional
office space and software costs related to our algorith-
mic and program trading (“APT”) capabilities, which
we acquired in the fourth quarter of 2004, were par-
tially offset by prior investments in technology becom-
ing fully depreciated.

Communications – Communication expenses
include
costs for telecommunication and data communication,
primarily consisting of expense for obtaining third-
party market data information. In 2006, communica-
tion expenses were $23.2 million, down 3.3 percent
from 2005. The decrease was due to costs savings
associated with a change in vendors related to our
equity trading system and a portion of these costs
are now being recorded within outside services as a
result of the change in vendors.

Management’s Discussion and Analysis of Financial Condition and Results of Operations

In 2005, communication expenses were $24.0 million,
down 3.1 percent from 2004. The decrease was pri-
marily attributable to lower market data service
expenses as a result of cost savings initiatives.

Floor Brokerage and Clearance – In 2006, floor brokerage
and clearance expenses were $13.3 million, compared
with $14.8 million in 2005, a decrease of 10.1 percent.
This decrease was a result of our continued efforts to
reduce expenses associated with accessing electronic
communication networks, offset in part by incremental
expense related to our European trading system.

Floor brokerage and clearance expenses in 2005
increased 5.5 percent to $14.8 million, compared with
2004, due to increased costs associated with APT.

Marketing and Business Development – Marketing and
business development expenses include travel and
entertainment and promotional and advertising costs.
In 2006, marketing and business development expenses
were $24.7 million, compared with $21.5 million in
2005, an increase of 14.8 percent. This increase was
attributable
expenses and
increased deal-related travel and entertainment costs.

conference

to higher

In 2005, marketing and business development expenses
decreased 12.7 percent to $21.5 million, compared
with $24.7 million in the prior year. This decrease
was largely driven by the impact of cost savings initi-
atives to reduce travel and supplies costs.

Outside Services – Outside services expenses include
securities processing expenses, outsourced technology
functions, outside legal fees and other professional fees.
Outside services expenses increased to $28.1 million in
2006, compared with $23.9 million for 2005. This
increase is due to services associated with our equity
trading system being bundled and provided by a single
vendor. Previously, these services were provided by
multiple vendors and were recorded in various expense
categories such as communications, floor brokerage
and clearance and outside services expenses based upon
the type of service being provided. In addition, we
incurred increased professional fee expense related to
recruitment of capital markets personnel.

Outside services expenses increased to $23.9 million in
2005, compared with $20.4 million in 2004. This
increase reflects the costs for outsourcing additional
technology functions, which were previously per-
formed in-house, and higher legal fees.

Cash Award Program – In connection with our spin-off
from U.S. Bancorp in 2003, we established a cash award
program pursuant to which we granted cash awards to a
broad-based group of our employees. The award pro-
gram was designed to aid in retention of employees and

to compensate for the value of U.S. Bancorp stock
options and restricted stock lost by our employees as
a result of the spin-off. The cash awards are being
expensed over a four-year period ending December 31,
2007. In 2006, cash awards expense decreased 29.1 per-
cent to $3.0 million, compared with the prior year. The
sale of our PCS branch network resulted in the forfeiture
and accelerated vesting of approximately half of our
cash awards and as a result, our ongoing cash award
expense will decrease. We anticipate incurring approx-
imately $1.5 million of cash award expense within con-
tinuing operations in 2007.

Restructuring-Related Expense – In the third quarter of
2005, we implemented certain expense reduction mea-
sures as a means to better align our cost infrastructure
with our revenues. This resulted in a pre-tax restruc-
turing charge of $8.6 million, consisting of $4.9 million
in severance benefits and $3.7 million related to the
reduction of office space.

Other Operating Expenses – Other operating expenses
include insurance costs, license and registration fees,
expenses related to our charitable giving program,
amortization on intangible assets and litigation-related
expenses, which consist of the amounts we reserve
and/or pay out related to legal and regulatory matters.
Other operating expenses decreased substantially to a
positive benefit of $9.1 million in 2006, compared with
expenses of $13.6 million in 2005. In the fourth quarter
of 2006, we reduced a litigation reserve related to
developments in a specific industry-wide litigation mat-
ter in which the company, along with other leading
securities firms, is a defendant. The change in our
litigation reserves related to this specific matter was
principally responsible for the significant reduction in
other operating expenses in 2006. The difficulty in
determining the timing and outcome of legal proceed-
ings may effect established reserves in the future,
impacting other operating expenses.

In 2005, other operating expenses decreased 19.1 per-
cent to $13.6 million, compared with $16.9 million in
2004. This decrease was driven by a decline in insur-
ance premiums and lower minority interest expense
related to our private equity investments.

Income Taxes – In 2006, our provision for income taxes
from continuing operations was $35.0 million, an effec-
tive tax rate of 35.7 percent, compared with $10.9 mil-
lion, an effective tax rate of 30.1 percent, for 2005, and
compared with $16.7 million, an effective tax rate of
34.1 percent, for 2004. The increased effective tax rate
in 2006 compared with 2005 and 2004 was primarily
attributable to a higher level of pre-tax income, which
reduced the effect of permanent differences.

Piper Jaffray Annual Report 2006

15

Management’s Discussion and Analysis of Financial Condition and Results of Operations

NET REVENUES FROM CONTINUING OPERATIONS (DETAIL)

FOR THE YEAR ENDED DECEMBER 31,

(Dollars in thousands)

Net revenues:

Investment banking
Underwriting

Fixed income

Equities

Advisory services

Total investment banking

Institutional sales and trading

Fixed income

Equities

Total institutional sales and trading

Other income/(loss)

Total net revenues

N/M — Not Meaningful

2006

2005

2004

PERCENT INC/(DEC)

2006
v 2005

2005
v 2004

$ 67,649

$ 62,096

$ 10.5%

8.9%

$ 74,751

114,736
105,321

75,026
100,672

87,505
78,066

294,808

243,347

227,667

52.9
4.6

21.1

(14.3)
29.0

6.9

75,170

122,422

197,592

10,534

65,816

80,189

117,380

118,150

14.2

4.3

(17.9)

(0.7)

183,196

198,339

7.9

(7.6)

(5,235)

8,200

N/M

N/M

$502,934

$421,308

$434,206

19.4% (3.0)%

investment banking revenues

increased
In 2006,
21.1 percent
to $294.8 million, compared with
$243.3 million in 2005. Equity underwriting revenues
increased 52.9 percent to $114.7 million in 2006,
which was due to an increase in completed transactions
and an increase in the number of book-run deals, where
we earn a larger percentage of revenue per transaction.
During 2006, we completed 99 equity financings, rais-
ing $13.6 billion in capital for our clients, compared
with 73 equity financings, raising $8.8 billion in cap-
ital, during 2005. Of these completed transactions, we
were bookrunner on 41 of the equity financings in
2006, compared with 25 equity financings in 2005.
Our London office completed nine of the total equity
financings in 2006, compared with two in 2005. Fixed
income financings revenues in 2006 increased 10.5 per-
cent to $74.8 million. The increase was driven by
higher public finance revenues, as an increase in aver-
age revenue per transaction more than offset fewer
completed transactions. We underwrote 452 municipal
issues with a par value of $6.6 billion during 2006,
compared with 473 municipal issues with a par value of
$6.1 billion during 2005. Advisory services revenues
increased 4.6 percent to $105.3 million in 2006, as
higher average revenues per transaction offset the
decline in completed transactions. We completed 41
mergers and acquisitions
transactions valued at
$7.3 billion during 2006, compared with 47 deals
valued at $9.1 billion during 2005.

Institutional sales and trading revenues comprise all the
revenues generated through trading activities, prima-
rily the facilitation of customer trades. To assess the

profitability of institutional sales and trading activities,
we aggregate institutional brokerage revenues with the
net interest income or expense associated with financ-
ing, economically hedging and holding long or short
inventory positions. Our results in sales and trading
vary from quarter to quarter with changes in trading
margins, trading volumes and the timing of transac-
tions as a result of market opportunities. Increased
price transparency in the fixed income market, pressure
from institutional clients in the equity market to reduce
commissions and the use of alternative trading systems
in the equity market have put pressure on trading
margins. We expect this pressure to continue.

In 2006,
institutional sales and trading revenues
increased 7.9 percent to $197.6 million, compared with
$183.2 million in 2005. Fixed income institutional
sales and trading revenues increased 14.2 percent to
$75.2 million in 2006, compared with $65.8 million in
2005. We were able to improve year-over-year perfor-
mance in fixed income institutional sales and trading
through higher cash sales and trading and increased
high-yield and structured product revenues, offset in
part by lower interest rate product revenues. Equity
institutional
sales and trading revenue increased
4.3 percent in 2006, to $122.4 million due to incre-
mental sales and trading revenue related to our Euro-
pean expansion and increased revenues from APT and
convertibles, partially offset by decreased revenues
from lower volumes and pressure by institutional cli-
ents to reduce commissions in our traditional equity
sales and trading business.

16

Piper Jaffray Annual Report 2006

Management’s Discussion and Analysis of Financial Condition and Results of Operations

investors.

Other income/loss includes gain and losses from invest-
ments in private equity and venture capital funds as
well as other firm investments and management fees
from our private capital business, which provides asset
In
management services to institutional
2006, other income totaled $10.5 million, compared
with a loss of $5.2 million in 2005. During 2006, we
recorded a $9.9 million gain related to our ownership
of two seats on the New York Stock Exchange, which
were exchanged for cash and restricted shares of com-
mon stock of the NYSE Group, Inc. In addition, in the
third quarter of 2006, we repaid $180 million in sub-
ordinated debt with proceeds from the sale of the PCS
branch network, which reduced interest expense, and
in the third and fourth quarters of 2006, invested the
excess proceeds from the sale in short-term interest
bearing instruments, which generated interest income.

increased 8.9 percent

Investment banking revenues increased 6.9 percent to
$243.3 million in 2005, compared with $227.7 million
in 2004. This increase was primarily attributable to
strong advisory services revenues, which increased
29.0 percent to $100.7 million, compared with 2004.
We completed 47 mergers and acquisitions deals valued
at $9.1 billion in 2005, compared with 49 deals valued
at $6.8 billion in 2004. Additionally, fixed income
underwriting revenues
to
$67.6 million in 2005 compared with $62.1 million
in 2004. We underwrote 473 municipal issues with a
par value of $6.1 billion during 2005, compared with
504 municipal issues with a par value of $5.9 billion
during 2004. In 2005, equity underwriting revenues
decreased 14.3 percent to $75.0 million. Driving this
decline in equity underwriting revenues were less favor-
able capital market conditions, particularly during the
first half of 2005, that led to a decline in offering
activity compared with the prior year. During 2005,
we completed 73 equity offerings, raising $8.8 billion
in capital for our clients, compared with 94 equity
offerings, raising $12.9 billion in capital, during 2004.

In 2005,
institutional sales and trading revenues
decreased 7.6 percent to $183.2 million, compared
with $198.3 million in 2004. Fixed income institu-
tional sales and trading revenues declined 17.9 percent
to $65.8 million in 2005, compared with $80.2 million
in 2004. Rising interest rates and a flattened yield curve
resulted in reduced sales and trading volumes in fixed
income products. Additionally,
trading margins
declined in 2005, due largely to increased price trans-
parency in the corporate bond markets and growth in
electronic trading. In early 2005, certain high-yield
bonds for which we issue proprietary research became
subject to TRACE disclosure requirements. These high-
yield bonds represent a substantial portion of our

overall corporate bond sales and trading. In 2005,
equity institutional sales and trading revenue were
essentially flat when compared with 2004. We experi-
enced downward pressure on net commissions in the
cash equities business in 2005 as a result of increased
pressure from institutional clients to reduce transaction
costs. The decline in net commissions in our cash
equities business was offset by increased electronic
trading revenue from our APT capabilities acquired
in the fourth quarter of 2004.

Other income/loss in 2005 was a loss of $5.2 million
compared with income of $8.2 million in 2004. This
fluctuation is driven by two primary factors. First, in
2004, higher gains were recorded on our private equity
investments and our results included revenues associ-
ated with our venture capital business, the management
of which was transitioned to an independent company
effective December 31, 2004. Second, in 2005, the
interest rate on our outstanding subordinated debt
increased by approximately 200 bps, increasing the
amount of interest expense recorded in 2005.

DISCONTINUED OPERATIONS

Discontinued operations include the operating results
of our PCS business, the gain on sale of the PCS branch
network, and restructuring and transaction costs. The
sale of the PCS branch network to UBS closed on
August 11, 2006.

Our PCS retail brokerage business provided financial
advice and a wide range of financial products and
services to individual investors through a network of
approximately 90 branch offices. Revenues were gen-
erated primarily through the receipt of commissions
earned on equity and fixed income transactions and for
distribution of mutual funds and annuities, fees earned
on fee-based client accounts and net interest from
customers’ margin loan balances.

In 2006, income from discontinued operations, net of
tax, was $172.4 million. See Note 4 to our consolidated
financial statements for further discussion of our dis-
continued operations.

In connection with the sale of our PCS branch network,
we implemented a plan to significantly restructure our
support infrastructure. We recorded $60.7 million in
pre-tax restructuring costs in 2006. We expect to incur
additional restructuring costs in the first and second
quarters of 2007 related to transitioning off of our
retail-based back office system as we convert to a
capital markets back office system. In addition, we
may incur discontinued operations expense or income
related to changes in litigation reserve estimates for
retained PCS litigation matters and for changes in

Piper Jaffray Annual Report 2006

17

Management’s Discussion and Analysis of Financial Condition and Results of Operations

estimates related to occupancy and severance restruc-
turing charges.

Recent Accounting Pronouncements

Recent accounting pronouncements are set forth in
Note 3 to our consolidated financial statements
included in our Annual Report to Shareholders, and
are incorporated herein by reference.

Critical Accounting Policies

Our accounting and reporting policies comply with
generally accepted accounting principles (“GAAP”)
and conform to practices within the securities industry.
The preparation of financial statements in compliance
with GAAP and industry practices requires us to make
estimates and assumptions that could materially affect
amounts reported in our consolidated financial state-
ments. Critical accounting policies are those policies
that we believe to be the most important to the por-
trayal of our financial condition and results of opera-
tions and that require us to make estimates that are
difficult, subjective or complex. Most accounting pol-
icies are not considered by us to be critical accounting
policies. Several factors are considered in determining
whether or not a policy is critical, including, among
others, whether the estimates are significant to the
consolidated financial statements taken as a whole,
the nature of the estimates, the ability to readily val-
idate the estimates with other information, including
third-party or independent sources, the sensitivity of
the estimates to changes in economic conditions and
whether alternative accounting methods may be used
under GAAP.

For a full description of our significant accounting
policies, see Note 2 to our consolidated financial state-
ments included in our Annual Report to Shareholders.
We believe that of our significant accounting policies,
the following are our critical accounting policies.

VALUATION OF FINANCIAL INSTRUMENTS

Trading securities owned, trading securities owned and
pledged as collateral, and trading securities sold, but
not yet purchased, on our consolidated statements of
financial condition consist of financial
instruments
recorded at fair value. Unrealized gains and losses
related to these financial instruments are reflected on
our consolidated statements of operations.

The fair value of a financial instrument is the amount at
which the instrument could be exchanged in a current
transaction between willing parties, other than in a
forced or liquidation sale. When available, we use

18

Piper Jaffray Annual Report 2006

instruments

observable market prices, observable market parame-
ters, or broker or dealer prices (bid and ask prices) to
derive the fair value of the instrument. In the case of
financial
transacted on recognized
exchanges, the observable market prices represent quo-
tations for completed transactions from the exchange
on which the financial instrument is principally traded.
Bid prices represent the highest price a buyer is willing
to pay for a financial instrument at a particular time.
Ask prices represent the lowest price a seller is willing
to accept for a financial instrument at a particular time.

A substantial percentage of the fair value of our trading
securities owned, trading securities owned and pledged
as collateral, and trading securities sold, but not yet
purchased, are based on observable market prices,
observable market parameters, or derived from broker
or dealer prices. The availability of observable market
prices and pricing parameters can vary from product to
product. Where available, observable market prices
and pricing or market parameters in a product may
be used to derive a price without requiring significant
judgment. In certain markets, observable market prices
or market parameters are not available for all products,
and fair value is determined using techniques appro-
priate for each particular product. These techniques
involve some degree of judgment.

For investments in illiquid or privately held securities
that do not have readily determinable fair values, the
determination of fair value requires us to estimate the
value of the securities using the best information avail-
able. Among the factors considered by us in determin-
ing the fair value of financial instruments are the cost,
terms and liquidity of the investment, the financial
condition and operating results of the issuer, the quoted
market price of publicly traded securities with similar
quality and yield, and other factors generally pertinent
to the valuation of investments. In instances where a
security is subject to transfer restrictions, the value of
the security is based primarily on the quoted price of a
similar security without restriction but may be reduced
by an amount estimated to reflect such restrictions. In
addition, even where the value of a security is derived
from an independent source, certain assumptions may
be required to determine the security’s fair value. For
instance, we assume that the size of positions in secu-
rities that we hold would not be large enough to affect
the quoted price of the securities if we sell them, and
that any such sale would happen in an orderly manner.
The actual value realized upon disposition could be
different from the currently estimated fair value.

Fair values for derivative contracts represent amounts
estimated to be received from or paid to a third party in
settlement of these instruments. These derivatives are

Management’s Discussion and Analysis of Financial Condition and Results of Operations

valued using quoted market prices when available or
pricing models based on the net present value of esti-
mated future cash flows. Management deemed the net
present value of estimated future cash flows model to
be the best estimate of fair value as most of our deriv-
ative products are interest rate products. The valuation
models used require inputs including contractual terms,
market prices, yield curves, credit curves and measures
of volatility. The valuation models are monitored over
the life of the derivative product. If there are any

changes in the underlying inputs, the model is updated
for those new inputs.

The following table presents the carrying value of our
trading securities owned, trading securities owned and
pledged as collateral and trading securities sold, but not
yet purchased for which fair value is measured based on
quoted prices or other independent sources versus those
for which fair value is determined by management.

DECEMBER 31, 2006

(Dollars in thousands)

Fair value of securities excluding derivatives, based on

quoted prices and independent sources

Fair value of securities excluding derivatives, as

determined by management

Fair value of derivatives as determined by management

Trading Securities
Owned or Pledged

Trading
Securities Sold,
But Not Yet
Purchased

$824,049

$211,098

17,336

25,141

–

6,486

$866,526

$217,584

Financial instruments carried at contract amounts that
approximate fair value have short-term maturities (one
year or less), are repriced frequently or bear market
interest rates and, accordingly, are carried at amounts
approximating fair value. Financial instruments carried
at contract amount on our consolidated statements of
financial condition include receivables from and pay-
ables to brokers, dealers and clearing organizations,
securities purchased under agreements to resell, secu-
rities sold under agreements to repurchase, receivables
from and payables to customers, short-term financing
and subordinated debt.

In September 2006, the Financial Accounting Stan-
dards Board (“FASB”) issued Statement of Financial
Accounting Standard No. 157, “Fair Value Measure-
ments” (“SFAS 157”). SFAS 157 defines fair value,
establishes a framework for measuring fair value and
expands disclosures regarding fair value measure-
ments. SFAS 157 does not require any new fair value
measurements, but its application may, for some enti-
ties, change current practice. SFAS 157 is effective for
fiscal years beginning after November 15, 2007. We are
currently evaluating the impact of SFAS 157 on our
results of operations and financial condition.

GOODWILL AND INTANGIBLE ASSETS

We record all assets and liabilities acquired in purchase
fair value as
including goodwill, at
acquisitions,
required by Statement of Financial Accounting Stan-
dards No. 141, “Business Combinations.” Determin-
ing the fair value of assets and liabilities acquired
requires certain management estimates. In conjunction

with the sale of our PCS branch network to UBS, we
wrote-off $85.6 million of goodwill during the third
quarter of 2006. At December 31, 2006, we had good-
will of $231.6 million, principally as a result of the
1998 acquisition of our predecessor, Piper Jaffray
Companies Inc., and its subsidiaries by U.S. Bancorp.

Under Statement of Financial Accounting Standards
No. 142, “Goodwill and Other Intangible Assets,”
we are required to perform impairment tests of our
goodwill and intangible assets annually and more fre-
quently in certain circumstances. We have elected to
test for goodwill impairment in the fourth quarter of
each calendar year. The goodwill impairment test is a
two-step process, which requires management to make
judgments in determining what assumptions to use in
the calculation. The first step of the process consists of
estimating the fair value of our operating segment
based on a discounted cash flow model using revenue
and profit forecasts and comparing those estimated fair
values with carrying values, which includes the allo-
cated goodwill. If the estimated fair value is less than
the carrying values, a second step is performed to
compute the amount of the impairment by determining
an “implied fair value” of goodwill. The determination
of a reporting unit’s “implied fair value” of goodwill
requires us to allocate the estimated fair value of the
reporting unit to the assets and liabilities of the report-
ing unit. Any unallocated fair value represents the
“implied fair value” of goodwill, which is compared
to its corresponding carrying value. We completed our
last goodwill impairment test as of October 31, 2006,
and no impairment was identified.

Piper Jaffray Annual Report 2006

19

Management’s Discussion and Analysis of Financial Condition and Results of Operations

As noted above, the initial recognition of goodwill and
other intangible assets and the subsequent impairment
analysis requires management to make subjective judg-
ments concerning estimates of how the acquired assets
or businesses will perform in the future using valuation
methods including discounted cash flow analysis.
Events and factors that may significantly affect the
estimates include, among others, competitive forces
and changes in revenue growth trends, cost structures,
technology, discount rates and market conditions.
Additionally, estimated cash flows may extend beyond
ten years and, by their nature, are difficult to determine
over an extended time period. To assess the reason-
ableness of cash flow estimates and validate assump-
tions used in our estimates, we review historical
performance of the underlying assets or similar assets.

In assessing the fair value of our operating segment, the
volatile nature of the securities markets and our indus-
try requires us to consider the business and market
cycle and assess the stage of the cycle in estimating the
timing and extent of future cash flows. In addition to
estimating the fair value of an operating segment based
on discounted cash flows, we consider other informa-
tion to validate the reasonableness of our valuations,
including public market comparables and multiples of
recent mergers and acquisitions of similar businesses.
Valuation multiples may be based on revenues, pri-
ce-to-earnings and tangible capital ratios of compara-
ble public companies and business segments. These
multiples may be adjusted to consider competitive dif-
ferences including size, operating leverage and other
factors. If during any future period it is determined that
an impairment exists, the results of operations in that
period could be materially adversely affected.

STOCK-BASED COMPENSATION

As part of our compensation to employees and direc-
tors, we use stock-based compensation, consisting of
stock options and restricted stock. Prior to January 1,
2006, we elected to account for stock-based employee
compensation on a prospective basis under the fair
value method, as prescribed by Statement of Financial
Accounting Standards No. 123, “Accounting and Dis-
closure of Stock-Based Compensation,” and as
amended by Statement of Financial Accounting Stan-
dards No. 148, “Accounting for Stock-Based Compen-
sation – Transition and Disclosure.” The fair value
method required stock based compensation to be
expensed in the consolidated statement of operations
at their fair value.

Effective January 1, 2006, we adopted the provisions of
Statement of Financial Accounting Standards No. 123(R),
“Share-Based Payment,” (“SFAS 123(R)”), using the

20

Piper Jaffray Annual Report 2006

modified prospective transition method. SFAS 123(R)re-
quires all stock-based compensation to be expensed in the
consolidated statement of operations at fair value, net of
estimated forfeitures. Because we have expensed all equity
awards based on the fair value method, net of estimated
forfeitures, SFAS 123(R) did not have a material effect on
our measurement or recognition methods for stock-based
compensation.

Compensation paid to employees in the form of stock
options or restricted stock is generally amortized on a
straight-line basis over the required service period of
the award, which is typically three years, and is
included in our results of operations as compensation
expense, net of estimated forfeitures. The majority of
our restricted stock grants provide for continued vest-
ing after termination, providing the employee does not
violate certain post-termination restrictions, as set
forth in the award agreements. We consider the
required service period to be the greater of the vesting
period or the post-termination restricted period. We
believe that our non-competition restrictions meet the
SFAS 123(R) definition of a substantive service
requirement.

Stock-based compensation granted to our non-
employee directors is in the form of stock options.
Stock-based compensation paid to directors is imme-
diately vested (i.e., there is no continuing service
requirement) and is included in our results of opera-
tions as outside services expense as of the date of grant.

In determining the estimated fair value of stock
options, we use the Black-Scholes option-pricing
model. This model requires management to exercise
judgment with respect to certain assumptions, includ-
ing the expected dividend yield, the expected volatility,
and the expected life of the options. The expected
dividend yield assumption is based on the assumed
dividend payout over the expected life of the option.
The expected volatility assumption is based on industry
comparisons, as we have limited information on which
to base our volatility estimates because we have only
been a public company since the beginning of 2004.
The expected life of options assumption is based on the
average of the following two factors: industry compar-
isons and the guidance provided by the SEC in Staff
Accounting Bulletin No. 107 (“SAB 107”). SAB 107
allowed the use of an “acceptable” methodology under
which we can take the midpoint of the vesting date and
the full contractual term. We believe our approach for
calculating an expected life to be an appropriate
method in light of the lack of any historical data
regarding employee exercise behavior or employee
post-termination behavior. Additional
information
regarding assumptions used in the Black-Scholes

Management’s Discussion and Analysis of Financial Condition and Results of Operations

pricing model can be found in Note 20 to our consol-
idated financial statements.

CONTINGENCIES

We are involved in various pending and potential legal
proceedings related to our business, including litiga-
tion, arbitration and regulatory proceedings. Some of
these matters involve claims for substantial amounts,
including claims for punitive and other special dam-
ages. The number of these legal proceedings has
increased in recent years. We have, after consultation
with outside legal counsel and consideration of facts
currently known by management, recorded estimated
losses in accordance with Statement of Financial
Accounting Standards No. 5, “Accounting for Contin-
gencies,” to the extent that claims are probable of loss
and the amount of the loss can be reasonably estimated.
The determination of these reserve amounts requires
significant judgment on the part of management. In
making these determinations, we consider many fac-
tors, including, but not limited to, the loss and damages
sought by the plaintiff or claimant, the basis and valid-
ity of the claim, the likelihood of a successful defense
against the claim, and the potential for, and magnitude
of, damages or settlements from such pending and
potential litigation and arbitration proceedings, and
fines and penalties or orders from regulatory agencies.

Under the terms of our separation and distribution agree-
ment with U.S. Bancorp and ancillary agreements entered
into in connection with the spin-off, we generally are
responsible for all liabilities relating to our business,
including those liabilities relating to our business while
it was operated as a segment of U.S. Bancorp under the
supervision of its management and board of directors and
while our employees were employees of U.S. Bancorp
servicing our business. Similarly, U.S. Bancorp generally is
responsible for all liabilities relating to the businesses
U.S. Bancorp retained. However, in addition to our estab-
lished reserves, U.S. Bancorp agreed to indemnify us in an
amount up to $17.5 million for losses that result from
certain matters, primarily third-party claims relating to
research analyst independence. U.S. Bancorp has the right
to terminate this indemnification obligation in the event
of a change in control of our company. As of December 31,
2006, approximately $13.2 million of the indemnification
remained available.

As part of our asset purchase agreement with UBS for
the sale of our PCS branch network, UBS agreed to
assume certain liabilities of the PCS business, including
certain liabilities and obligations arising from litiga-
tion, arbitration, customer complaints and other claims
related to the PCS business. In certain cases we have
agreed to indemnify UBS for litigation matters after

UBS has incurred costs of $6.0 million related to these
matters. In addition, we have retained liabilities arising
from regulatory matters and certain litigation relating
to the PCS business prior to the sale.

Subject to the foregoing, we believe, based on our
current knowledge, after appropriate consultation with
outside legal counsel and after taking into account our
established reserves, the U.S. Bancorp indemnity agree-
ment and the assumption by UBS of certain liabilities of
the PCS business, that pending litigation, arbitration
and regulatory proceedings will be resolved with no
material adverse effect on our financial condition.
However, if, during any period, a potential adverse
contingency should become probable or resolved for
an amount in excess of the established reserves and
indemnification, the results of operations in that period
could be materially adversely affected.

Liquidity and Capital Resources

Liquidity is of critical importance to us given the nature
of our business. Insufficient liquidity resulting from
adverse circumstances contributes to, and may be the
cause of, financial institution failure. Accordingly, we
regularly monitor our liquidity position, including our
cash and net capital positions, and we have imple-
mented a liquidity strategy designed to enable our
business to continue to operate even under adverse
circumstances, although there can be no assurance that
our strategy will be successful under all circumstances.

We have a liquid balance sheet. Most of our assets
consist of cash and assets readily convertible into cash.
Securities inventories are stated at fair value and are
generally readily marketable. Receivables and payables
with customers and brokers and dealers usually settle
within a few days. As part of our liquidity strategy, we
emphasize diversification of funding sources. We utilize
a mix of funding sources and, to the extent possible,
maximize our lower-cost financing alternatives. Our
assets are financed by our cash flows from operations,
equity capital, bank lines of credit and proceeds from
securities sold under agreements to repurchase. The
fluctuations in cash flows from financing activities are
directly related to daily operating activities from our
various businesses.

A significant component of our employees’ compensa-
tion is paid in an annual bonus. The timing of these
bonus payments, which generally are paid in February,
has a significant impact on our cash position and
liquidity when paid.

We currently do not pay cash dividends on our common
stock.

Piper Jaffray Annual Report 2006

21

Management’s Discussion and Analysis of Financial Condition and Results of Operations

On August 11, 2006, we closed the sale of our PCS
branch network and certain related assets to UBS. We
received proceeds of approximately $500 million for
our branch network and $250 million for certain other
assets, consisting primarily of customer margin loans.
During the third quarter of 2006, we utilized these
proceeds to repay all of our $180 million in subordi-
nated debt outstanding, repurchase approximately
1.6 million shares of common stock through an accel-
erated share repurchase program for an aggregate price
of $100 million, repay stock loan liabilities and reduce
securities sold under agreements to repurchase. During
the fourth quarter of 2006, we paid approximately
$160 million in income tax liabilities related to the
gain on the sale of our PCS branch network.

Cash and cash equivalents decreased $17.0 million in
2004 to $67.4 million at December 31, 2004. Operat-
ing activities used cash of $3.2 million, as cash received
from earnings and operating assets and liabilities was
exceeded by cash utilized toward fails to deliver, stock
borrowed and for processing accounts. Cash of
$30.2 million was used for investing activities toward
the purchase of fixed assets and the acquisition of Vie
Securities, LLC. Cash of $16.4 million was generated
including $133.6 million
by financing activities,
received from secured financing
and
$41.7 million from securities loaned. The cash gener-
ated through repurchase agreements and securities
loaned financing was offset by a net reduction of
short-term borrowings of $159.0 million.

activities

In connection with the sale of our PCS branch network,
our board of directors authorized the repurchase of
$180 million in common shares through December 31,
2007. Following the completion of our accelerated
share repurchase, we have $80 million of share repur-
chase authorization remaining.

CASH FLOWS

Cash and cash equivalents decreased $21.0 million to
$39.9 million at December 31, 2006. Operating activ-
ities used cash of $72.4 million, as cash paid out for
operating assets and liabilities exceeded cash received
from earnings. Cash of $707.4 million was provided by
investing activities due to the sale of the PCS branch
network to UBS. Cash of $657.2 million was used in
financing activities. We used the proceeds from the sale
of PCS to repay $180 million in subordinated debt and
repurchase approximately 1.6 million shares of com-
mon stock through an accelerated share repurchase
program in the amount of $100 million. In addition,
we paid down other short-term borrowings used to
finance our continuing operations.

Cash and cash equivalents decreased $6.5 million in
2005 to $60.9 million at December 31, 2005. Operat-
ing activities provided cash of $95.2 million, as cash
received from earnings and operating assets and liabil-
ities exceeded cash utilized to increase net trading
securities owned. Cash of $15.3 million was used for
investing activities toward the purchase of fixed assets.
Cash of $86.3 million was used in financing activities,
including a $55.5 million reduction of our secured
financing activities and $42.6 million utilized to repur-
chase common stock in conjunction with a share repur-
chase program of 1.3 million shares of common stock
completed on October 4, 2005. The cash used in
financing activities was offset by an increase in securi-
ties loaned activities of $11.8 million.

FUNDING SOURCES

We have available discretionary short-term financing
on both a secured and unsecured basis. Secured financ-
ing is obtained through the use of repurchase agree-
ments and secured bank loans. Bank loans and
repurchase agreements are typically collateralized by
the firm’s securities inventory. Short-term funding is
generally obtained at rates based upon the federal funds
rate.

To finance customer receivables we utilized an average
of $15 million in short-term bank loans and an average
of $133 million in securities lending arrangements in
2006. This compares to an average of $38 million in
short-term bank loans and $244 million in average
securities lending arrangements in 2005. Average net
repurchase agreements (excluding economic hedges) of
$80 million and $176 million in 2006 and in 2005,
respectively, were primarily used to finance inventory.
The reduction in average short-term bank loans, secu-
rities lending arrangements and average net repurchase
agreements during 2006 was due to the receipt of
approximately $750 million in proceeds from the sale
of our PCS branch network. Growth in our securities
inventory is generally financed through repurchase
agreements or securities lending. Bank financing sup-
plements these sources as necessary. On December 31,
2006, we had no outstanding short-term bank
financing.

As of December 31, 2006, we had uncommitted credit
agreements with banks totaling $675 million, com-
prised of $555 million in discretionary secured lines
and $120 million in discretionary unsecured lines. We
have been able to obtain necessary short-term borrow-
ings in the past and believe we will continue to be able
to do so in the future. We also have established arrange-
ments to obtain financing using as collateral our

22

Piper Jaffray Annual Report 2006

Management’s Discussion and Analysis of Financial Condition and Results of Operations

securities held by our clearing bank or by another
broker dealer at the end of each business day.

On August 15, 2006, we utilized proceeds from the sale
of our PCS branch network to repay in full our
$180 million subordinated loan with U.S. Bancorp.

CONTRACTUAL OBLIGATIONS

The following table provides a summary of our con-
tractual obligations as of December 31, 2006:

(Dollars in millions)

Operating leases

Cash award program
Venture fund commitments a
Purchase obligations

2008
Through
2009

2010
Through
2011

2012
and
Thereafter

Total

29.7

25.7

28.4

96.5

–
–

4.1

–
–

–

–
–

–

1.5
5.9

7.4

2007

12.7

1.5
–

3.3

(a) The venture fund commitments have no specified call dates. The timing of capital calls is based on market conditions and investment opportunities.

CAPITAL REQUIREMENTS

As a registered broker dealer and member firm of the
NYSE, our broker dealer subsidiary is subject to the
uniform net capital rule of the SEC and the net capital
rule of the NYSE. We have elected to use the alternative
method permitted by the uniform net capital rule,
which requires that we maintain minimum net capital
of the greater of $1.0 million or 2 percent of aggregate
debit balances arising from customer transactions, as
this is defined in the rule. The NYSE may prohibit a
member firm from expanding its business or paying
dividends if resulting net capital would be less than
5 percent of aggregate debit balances. Advances to
affiliates, repayment of subordinated liabilities, divi-
dend payments and other equity withdrawals are sub-
ject to certain notification and other provisions of the
uniform net capital rule and the net capital rule of the
NYSE. We expect that these provisions will not impact
our ability to meet current and future obligations. In
addition, we are subject to certain notification require-
ments related to withdrawals of excess net capital from
our broker dealer subsidiary. Piper Jaffray Ltd., our
registered United Kingdom broker dealer subsidiary, is
subject to the capital requirements of the U.K. Financial
Services Authority.

At December 31, 2006, net capital under the SEC’s
Uniform Net Capital Rule was $367.1 million or
395.3 percent of aggregate debit balances, and
$365.3 million in excess of the minimum required
net capital.

Off-Balance Sheet Arrangements

We enter into various types of off-balance sheet
arrangements in the ordinary course of business. We
hold retained interests in non-consolidated entities,
incur obligations to commit capital to non-consoli-
dated entities, enter into derivative transactions, enter

into non-derivative guarantees, commit to short-term
“bridge loan” financing for our clients and enter into
other off-balance sheet arrangements.

We enter into arrangements with special-purpose enti-
ties (“SPEs”), also known as variable interest entities.
SPEs are corporations, trusts or partnerships that are
established for a limited purpose. SPEs, by their nature,
generally are not controlled by their equity owners, as
the establishing documents govern all material deci-
sions. Our primary involvement with SPEs relates to
securitization transactions related to our tender option
bond program in which highly rated fixed rate munic-
ipal bonds are sold to an SPE. We follow Statement of
Financial Accounting Standards No. 140, “Accounting
for Transfers and Servicing of Financial Assets and
Extinguishments of Liabilities – a Replacement of
FASB Statement No. 125,” (“SFAS 140”), to account
for securitizations and other transfers of financial
assets. Therefore, we derecognize financial assets trans-
ferred in securitizations provided that such transfer
meets all of the SFAS 140 criteria. See Note 6, “Securi-
tizations,” in the notes to our consolidated financial
statements for a complete discussion of our securitiza-
tion activities.

We have investments in various entities, typically part-
nerships or limited liability companies, established for
the purpose of investing in emerging growth companies
or other private or public equity. We commit capital or
act as the managing partner or member of these entities.
These entities are reviewed under variable interest
entity and voting interest entity standards. If we deter-
mine that an entity should not be consolidated, we
record these investments on the equity method of
accounting. The lower of cost or market method of
accounting is applied to investments where we do not
have the ability to exercise significant influence over

Piper Jaffray Annual Report 2006

23

Management’s Discussion and Analysis of Financial Condition and Results of Operations

the operations of an entity. For a complete discussion of
our activities related to these types of partnerships, see
Note 7, “Variable Interest Entities,” to our consoli-
dated financial statements included in our Annual
Report to Shareholders on Form 10-K for the year
ended December 31, 2006.

We enter into derivative contracts in a principal capac-
ity as a dealer to satisfy the financial needs of clients.
We also use derivative products to manage the interest
rate and market value risks associated with our security
positions. For a complete discussion of our activities
related to derivative products, see Note 5, “Deriva-
tives,” in the notes to our consolidated financial
statements.

In the third quarter of 2006, we entered into a strategic
relationship with CIT to provide clients with debt
solutions, including senior secured and unsecured debt,
second lien facilities, subordinated financings and mez-
zanine loans. Our strategic relationship with CIT offers
us the possibility of making commitments of capital
alongside CIT in connection with offering debt solu-
tions to our clients as opportunities arise.

Our other types of off-balance-sheet arrangements
include contractual commitments and guarantees.
For a discussion of our activities related to these off-
balance sheet arrangements, see Note 15, “Contingen-
cies, Commitments and Guarantees,” to our consoli-
dated financial statements included in our Annual
Report to Shareholders on Form 10-K for the year
ended December 31, 2006.

Enterprise Risk Management

Risk is an inherent part of our business. In the course of
conducting business operations, we are exposed to a
variety of risks. Market risk, credit risk, liquidity risk,
operational risk, and legal, regulatory and compliance
risk are the principal risks we face in operating our
business. We seek to identify, assess and monitor each
risk in accordance with defined policies and proce-
dures. The extent to which we properly identify and
effectively manage each of these risks is critical to our
financial condition and profitability.

among

trading

traders,

With respect to market risk and credit risk, the corner-
stone of our risk management process is daily commu-
nication
department
management and senior management concerning our
inventory positions and overall risk profile. Our risk
management functions supplement this communica-
tion process by providing their independent perspec-
tives on our market and credit risk profile on a daily
basis through a series of reports. The broader goals of

24

Piper Jaffray Annual Report 2006

our risk management functions are to understand the
risk profile of each trading area, to consolidate risk
monitoring company-wide, to articulate large trading
or position risks to senior management, and to ensure
accurate mark-to-market pricing.

In addition to supporting daily risk management pro-
cesses on the trading desks, our risk management func-
tions support our Market and Credit Risk Committee.
This committee oversees risk management practices,
including defining acceptable risk tolerances and
approving risk management policies.

MARKET RISK

Market risk represents the risk of financial volatility
that may result from the change in value of a financial
instrument due to fluctuations in its market price. Our
exposure to market risk is directly related to our role as
a financial intermediary for our clients, to our market-
making activities and our proprietary activities. Mar-
ket risk is inherent in both cash and derivative financial
instruments. The scope of our market risk management
policies and procedures includes all market-sensitive
financial instruments.

Our different types of market risk include:

(cid:129) Interest Rate Risk — Interest rate risk represents the
potential volatility from changes in market interest
rates. We are exposed to interest rate risk arising from
changes in the level and volatility of interest rates,
changes in the shape of the yield curve, changes in
credit spreads, and the rate of prepayments. Interest
rate risk is managed through the use of appropriate
hedging in U.S. government securities, agency securi-
ties, mortgage-backed securities, corporate debt secu-
rities, interest rate swaps, options, futures and forward
contracts. We utilize interest rate swap contracts to
hedge a portion of our fixed income inventory, to hedge
residual cash flows from our tender option bond pro-
gram, and to hedge rate lock agreements and forward
bond purchase agreements we may enter into with our
public finance customers. These interest rate swap
contracts are recorded at fair value with the changes
in fair value recognized in earnings.

(cid:129) Equity Price Risk – Equity price risk represents the
potential loss in value due to adverse changes in the
level or volatility of equity prices. We are exposed to
equity price risk through our trading activities in both
listed and over-the-counter equity markets. We attempt
to reduce the risk of loss inherent in our market-making
and in our inventory of equity securities by establishing
limits on the notional level of our inventory and by
managing net position levels with those limits.

Management’s Discussion and Analysis of Financial Condition and Results of Operations

VALUE-AT-RISK

Value-at-Risk (“VaR”) is the potential loss in value of
our trading positions due to adverse market movements
over a defined time horizon with a specified confidence
level. We perform a daily historical simulated VaR
analysis on substantially all of our trading positions,
including fixed income, equities, convertible bonds and
all associated economic hedges. We use a VaR model
because it provides a common metric for assessing
market risk across business lines and products. The
modeling of the market risk characteristics of our trad-
ing positions involves a number of assumptions and
approximations. While we believe that these assump-
tions and approximations are reasonable, different
assumptions and approximations could produce mate-
rially different VaR estimates.

We report an empirical VaR based on net realized
trading revenue volatility. Empirical VaR presents an
inclusive measure of our historical risk exposure, as it
incorporates virtually all trading activities and types of
risk including market, credit, liquidity and operational
risk. The exhibit below presents VaR using the past
250 days of net trading revenue. Consistent with indus-
try practice, when calculating VaR we use a 95 percent
confidence level and a one-day time horizon for calcu-
lating both empirical and simulated VaR. This means,
that over time, there is a 1 in 20 chance that daily
trading net revenues will fall below the expected daily
trading net revenues by an amount at least as large as
the reported VaR.

The following table quantifies the empirical VaR for
each component of market risk for the periods
presented:

AT DECEMBER 31,

(Dollars in thousands)

Interest Rate Risk

Equity Price Risk

Aggregate Undiversified Risk

Diversification Benefit

Aggregate Diversified Value-at-Risk

The table below illustrates the daily high, low and
average value-at-risk calculated for each component
of market risk during the years ended 2006 and 2005,
respectively.

FOR THE YEAR ENDED DECEMBER 31, 2006

(Dollars in thousands)

Interest Rate Risk
Equity Price Risk

Aggregate Undiversified Risk

Aggregate Diversified Value-at-Risk

FOR THE YEAR ENDED DECEMBER 31, 2005

(Dollars in thousands)

Interest Rate Risk

Equity Price Risk
Aggregate Undiversified Risk

Aggregate Diversified Value-at-Risk

2006

2005

$ 281

261

$ 324

345

542

(112)

669

(132)

$ 430

$ 537

High

Low

Average

$355
346

679

541

$262
254

521

404

$308
290

598

474

High

Low

Average

$1,436

$324

$538

345
1,705

1,558

258
668

536

314
853

719

Our VaR decreased in 2006, compared to 2005, due to
lower fixed income inventory levels.

We use model-based VaR simulations for managing
risk on a daily basis. Model-based VaR derived from
simulation has inherent limitations, including reliance
on historical data to predict future market risk and the
parameters established in creating the models that limit
quantitative risk information outputs. There can be no
assurance that actual losses occurring on any given day

arising from changes in market conditions will not
exceed the VaR amounts shown below or that such
losses will not occur more than once in a 20-day trading
period. In addition, different VaR methodologies and
distribution assumptions could produce materially
different VaR numbers. Changes in VaR between
reporting periods are generally due to changes in levels
of risk exposure, volatilities and/or correlations among
asset classes.

Piper Jaffray Annual Report 2006

25

Management’s Discussion and Analysis of Financial Condition and Results of Operations

The following table quantifies the model-based VaR
simulated for each component of market risk for the
periods presented:

AT DECEMBER 31,
(Dollars in thousands)

Interest Rate Risk

Equity Price Risk

Aggregate Undiversified Risk

Diversification Benefit

Aggregate Diversified Value-at-Risk

2006

2005

$ 574

177

$ 309

288

751

(150)

597

(239)

$ 601

$ 358

Supplementary measures employed by Piper Jaffray to
monitor and manage market risk exposure include the
following: net market position, duration exposure,
option sensitivities, and inventory turnover. All metrics
are aggregated by asset concentration and are used for
monitoring limits and exception approvals.

We anticipate our aggregate VaR may increase in future
periods as we commit more of our own capital to
proprietary investments.

LIQUIDITY RISK

Market risk can be exacerbated in times of trading
illiquidity when market participants refrain from trans-
acting in normal quantities and/or at normal bid-offer
spreads. Depending on the specific security, the struc-
ture of the financial product, and/or overall market
conditions, we may be forced to hold onto a security for
days or weeks longer than we had planned.

We are also exposed to liquidity risk in our day-to-day
funding activities. In addition to the benefit of having a
strong capital structure, we manage this risk by diver-
sifying our funding sources across products and among
individual counterparties within those products. For
example, our treasury department can switch between
securities lending, repurchase agreements, box loans
and bank borrowings on any given day depending on
the pricing and availability of funding from any one of
these sources.

In addition to managing our capital and funding, the
treasury department oversees the management of net
interest income risk, portfolio collateral, and the over-
all use of our capital, funding, and balance sheet.

CREDIT RISK

as a holder of securities and as a member of exchanges
and clearing organizations. Our client activities involve
the execution, settlement and financing of various
transactions. Client activities are transacted on a cash,
delivery versus payment or margin basis. Our credit
exposure to institutional client business is mitigated by
the use of industry-standard delivery versus payment
through depositories and clearing banks.

Credit exposure associated with our customer margin
accounts are monitored daily and are collateralized.
Our risk management functions, in conjunction with
our market and credit risk committee, establish and
review appropriate credit limits for our customers uti-
lizing margin lending.

Our risk management functions review risk associated
with institutional counterparties with whom we hold
repurchase and resale agreement facilities, stock bor-
row or loan facilities, derivatives, TBAs and other
documented institutional counterparty agreements that
may give rise to credit exposure. Counterparty levels
are established relative to the level of counterparty
ratings and potential levels of activity.

We are subject to credit concentration risk if we hold
large individual securities positions, execute large
transactions with individual counterparties or groups
of related counterparties, extend large loans to indi-
vidual borrowers or make substantial underwriting
commitments. Concentration risk can occur by indus-
try, geographic area or type of client. Potential credit
concentration risk is carefully monitored and is man-
aged through the use of policies and limits.

Credit risk in our Capital Markets business arises from
potential non-performance by counterparties, custom-
ers, borrowers or issuers of securities we hold in our
trading inventory. We are exposed to credit risk in our
role as a trading counterparty to dealers and customers,

We are also exposed to the risk of loss related to
changes in the credit spreads of debt instruments.
Credit spread risk arises from potential changes in an
issuer’s credit rating or the market’s perception of the
issuer’s credit worthiness.

26

Piper Jaffray Annual Report 2006

Management’s Discussion and Analysis of Financial Condition and Results of Operations

OPERATIONAL RISK

Operational risk refers to the risk of direct or indirect
loss resulting from inadequate or failed internal pro-
cesses, people and systems or from external events. We
rely on the ability of our employees, our internal sys-
tems and processes and systems at computer centers
operated by third parties to process a large number of
transactions. In the event of a breakdown or improper
operation of our systems or processes or improper
action by our employees or third-party vendors, we
could suffer financial loss, regulatory sanctions and
damage to our reputation. We have business continuity
plans in place that we believe will cover critical pro-
cesses on a company-wide basis, and redundancies are
built into our systems as we have deemed appropriate.
These control mechanisms attempt to ensure that oper-
ations policies and procedures are being followed and
that our various businesses are operating within estab-
lished corporate policies and limits.

LEGAL, REGULATORY AND COMPLIANCE RISK

Legal, regulatory and compliance risk includes the risk
of non-compliance with applicable legal and regulatory
requirements and the risk that a counterparty’s perfor-
mance obligations will be unenforceable. We are gen-
erally subject to extensive regulation in the various

jurisdictions in which we conduct our business. We
have established procedures that are designed to ensure
compliance with applicable statutory and regulatory
requirements,
including, but not limited to, those
related to regulatory net capital requirements, sales
and trading practices, use and safekeeping of customer
funds and securities, credit extension, money-launder-
ing, privacy and recordkeeping.

We have established internal policies relating to ethics
and business conduct, and compliance with applicable
legal and regulatory requirements, as well as training
and other procedures designed to ensure that these
policies are followed.

Effects of Inflation

Because our assets are liquid in nature, they are not
significantly affected by inflation. However, the rate of
inflation affects our expenses, such as employee com-
pensation, office space leasing costs and communica-
tions charges, which may not be readily recoverable in
the price of services we offer to our clients. To the
extent inflation results in rising interest rates and has
other adverse effects upon the securities markets, it may
adversely affect our financial position and results of
operations.

Piper Jaffray Annual Report 2006

27

Management’s Discussion and Analysis of Financial Condition and Results of Operations

CAUTIONARY NOTE REGARDING FORWARD-LOOKING STATEMENTS

This Annual Report contains forward-looking statements. Statements that are not historical or current facts,
including statements about beliefs and expectations, are forward-looking statements. These forward-looking
statements cover, among other things, the future prospects of Piper Jaffray Companies. Forward-looking state-
ments involve inherent risks and uncertainties, and important factors could cause actual results to differ materially
from those anticipated, including the following: (1) developments in market and economic conditions have in the
past adversely affected, and may in the future adversely affect, our business and profitability, (2) developments in
specific sectors of the economy have in the past adversely affected, and may in the future adversely affect, our
business and profitability, (3) we may not be able to compete successfully with other companies in the financial
services industry who are often larger and better capitalized than we are, (4) we have experienced significant
pricing pressure in areas of our business, which may impair our revenues and profitability, (5) the volume of
anticipated investment banking transactions may differ from actual results, (6) our ability to attract, develop and
retain highly skilled and productive employees is critical to the success of our business, (7) our underwriting and
market-making activities may place our capital at risk, (8) an inability to readily divest or transfer trading
positions may result in financial losses to our business, (9) use of derivative instruments as part of our risk
management techniques may place our capital at risk, while our risk management techniques themselves may not
fully mitigate our market risk exposure, (10) an inability to access capital readily or on terms favorable to us could
impair our ability to fund operations and could jeopardize our financial condition, (11) increases in capital
commitments in our proprietary trading, investing and similar activities increase the potential for significant
losses, (12) we may make strategic acquisitions of businesses, engage in joint ventures or divest or exit existing
businesses, which could cause us to incur unforeseen expense and have disruptive effects on our business but may
not yield the benefits we expect, (13) our technology systems, including outsourced systems, are critical com-
ponents of our operations, and failure of those systems or other aspects of our operations infrastructure may
disrupt our business, cause financial loss and constrain our growth, (14) our business is subject to extensive
regulation that limits our business activities, and a significant regulatory action against our company may have a
material adverse financial effect or cause significant reputational harm to our company, (15) regulatory capital
requirements may limit our ability to expand or maintain present levels of our business or impair our ability to
meet our financial obligations, (16) our exposure to legal liability is significant, and could lead to substantial
damages, (17) the business operations that we conduct outside of the United States subject us to unique risks,
(18) we may suffer losses if our reputation is harmed, (19) our stock price may fluctuate as a result of several
factors, including but not limited to changes in our revenues and operating results, (20) provisions in our
certificate of incorporation and bylaws and of Delaware law may prevent or delay an acquisition of our company,
which could decrease the market value of our common stock, and (21) other factors identified under “Risk
Factors” in Part I, Item 1A of our Annual Report on Form 10-K for the year ended December 31, 2006, and
updated in our subsequent reports filed with the SEC. These reports are available at our Web site at www.pi-
perjaffray.com and at the SEC Web site at www.sec.gov. Forward-looking statements speak only as of the date they
are made, and we undertake no obligation to update them in light of new information or future events.

28

Piper Jaffray Annual Report 2006

INDEX TO AUDITED CONSOLIDATED FINANCIAL STATEMENTS

Piper Jaffray Companies

Management’s Report on Internal Control Over Financial Reporting

Report of Independent Registered Public Accounting Firm

Report of Independent Registered Public Accounting Firm
Consolidated Financial Statements:

Consolidated Statements of Financial Condition

Consolidated Statements of Operations

Consolidated Statements of Changes in Shareholders’ Equity
Consolidated Statements of Cash Flows

Notes to Consolidated Financial Statements

Note 1 Background
Note 2 Summary of Significant Accounting Policies

Note 3 Recent Accounting Pronouncements

Note 4 Discontinued Operations
Note 5 Derivatives

Note 6 Securitizations

Note 7 Variable Interest Entities
Note 8 Receivables from and Payables to Brokers, Dealers and Clearing Organizations

Note 9 Receivables from and Payables to Customers

Note 10 Collateralized Securities Transactions
Note 11 Goodwill and Intangible Assets

Note 12 Trading Securities Owned and Trading Securities Sold, but Not Yet Purchased

Note 13 Fixed Assets
Note 14 Financing

Note 15 Contingencies, Commitments and Guarantees

Note 16 Restructuring
Note 17 Shareholders’ Equity

Note 18 Earnings Per Share

Note 19 Employee Benefit Plans
Note 20 Stock-Based Compensation and Cash Award Program

Note 21 Net Capital Requirements and Other Regulatory Matters

Note 22 Income Taxes

Page

30

31

32

33

34

35
36

37

37
37

40

42
42

43

44
44

45

45
45

46

46
46

47

48
49

50

51
53

56

57

Piper Jaffray Annual Report 2006

29

Piper Jaffray Companies

MANAGEMENT’S REPORT ON INTERNAL CONTROL OVER FINANCIAL
REPORTING

Our management is responsible for establishing and maintaining adequate internal control over our financial
reporting. Our internal control system is designed to provide reasonable assurance regarding the reliability of
financial reporting and the preparation of financial statements for external purposes in accordance with
U.S. generally accepted accounting principles. All internal control systems, no matter how well designed, have
inherent limitations. Therefore, even those systems determined to be effective can provide only reasonable
assurance with respect to financial statement preparation and presentation.

Our management assessed the effectiveness of our internal control over financial reporting as of December 31,
2006. In making this assessment, management used the criteria set forth by the Committee of Sponsoring
Organizations of the Treadway Commission (COSO) in Internal Control-Integrated Framework. Based on its
assessment and those criteria, management has concluded that we maintained effective internal control over
financial reporting as of December 31, 2006.

Our independent registered public accounting firm has issued an attestation report on management’s assessment of
our internal control over financial reporting.

30

Piper Jaffray Annual Report 2006

Piper Jaffray Companies

REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM

The Board of Directors and Shareholders
Piper Jaffray Companies

We have audited management’s assessment, included in the accompanying Management’s Report on Internal
Control Over Financial Reporting, that Piper Jaffray Companies maintained effective internal control over
financial reporting as of December 31, 2006, based on criteria established in Internal Control — Integrated
Framework issued by the Committee of Sponsoring Organizations of the Treadway Commission (the COSO
criteria). Piper Jaffray Companies’ management is responsible for maintaining effective internal control over
financial reporting and for its assessment of the effectiveness of internal control over financial reporting. Our
responsibility is to express an opinion on management’s assessment and an opinion on the effectiveness of the
Company’s internal control over financial reporting based on our audit.

We conducted our audit in accordance with the standards of the Public Company Accounting Oversight Board
(United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about
whether effective internal control over financial reporting was maintained in all material respects. Our audit
included obtaining an understanding of internal control over financial reporting, evaluating management’s
assessment, testing and evaluating the design and operating effectiveness of internal control, and performing
such other procedures as we considered necessary in the circumstances. We believe that our audit provides a
reasonable basis for our opinion.

A company’s internal control over financial reporting is a process designed to provide reasonable assurance
regarding the reliability of financial reporting and the preparation of financial statements for external purposes in
accordance with generally accepted accounting principles. A company’s internal control over financial reporting
includes those policies and procedures that (1) pertain to the maintenance of records that, in reasonable detail,
accurately and fairly reflect the transactions and dispositions of the assets of the company; (2) provide reasonable
assurance that transactions are recorded as necessary to permit preparation of financial statements in accordance
with generally accepted accounting principles, and that receipts and expenditures of the company are being made
only in accordance with authorizations of management and directors of the company; and (3) provide reasonable
assurance regarding prevention or timely detection of unauthorized acquisition, use, or disposition of the
company’s assets that could have a material effect on the financial statements.

Because of its inherent limitations, internal control over financial reporting may not prevent or detect misstate-
ments. Also, projections of any evaluation of effectiveness to future periods are subject to the risk that controls
may become inadequate because of changes in conditions, or that the degree of compliance with the policies or
procedures may deteriorate.

In our opinion, management’s assessment that Piper Jaffray Companies maintained effective internal control over
financial reporting as of December 31, 2006, is fairly stated, in all material respects, based on the COSO criteria.
Also, in our opinion, Piper Jaffray Companies maintained, in all material respects, effective internal control over
financial reporting as of December 31, 2006, based on the COSO criteria.

We also have audited, in accordance with the standards of the Public Company Accounting Oversight Board
(United States), the 2006 consolidated financial statements of Piper Jaffray Companies, and our report dated
February 28, 2007, expressed an unqualified opinion thereon.

Minneapolis, Minnesota
February 28, 2007

Piper Jaffray Annual Report 2006

31

Piper Jaffray Companies

REPORT OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM

The Board of Directors and Shareholders
Piper Jaffray Companies

We have audited the accompanying consolidated statements of financial condition of Piper Jaffray Companies as
of December 31, 2006 and 2005, and the related consolidated statements of operations, changes in shareholders’
equity, and cash flows for each of the three years in the period ended December 31, 2006. These financial
statements are the responsibility of the Company’s management. Our responsibility is to express an opinion on
these financial statements based on our audits.

We conducted our audits in accordance with the standards of the Public Company Accounting Oversight Board
(United States). Those standards require that we plan and perform the audit to obtain reasonable assurance about
whether the financial statements are free of material misstatement. An audit includes examining, on a test basis,
evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the
accounting principles used and significant estimates made by management, as well as evaluating the overall
financial statement presentation. We believe that our audits provide a reasonable basis for our opinion.

In our opinion, the financial statements referred to above present fairly, in all material respects, the consolidated
financial position of Piper Jaffray Companies at December 31, 2006 and 2005, and the consolidated results of its
operations and its cash flows for each of the three years in the period ended December 31, 2006, in conformity
with U.S. generally accepted accounting principles.

We have also audited, in accordance with the standards of the Public Company Accounting Oversight Board
(United States), the effectiveness of Piper Jaffray Companies’ internal control over financial reporting as of
December 31, 2006, based on criteria established in Internal Control — Integrated Framework issued by the
Committee of Sponsoring Organizations of the Treadway Commission, and our report dated February 28, 2007,
expressed an unqualified opinion thereon.

Minneapolis, Minnesota
February 28, 2007

32

Piper Jaffray Annual Report 2006

CONSOLIDATED STATEMENTS OF FINANCIAL CONDITION

DECEMBER 31,

(Amounts in thousands, except share data)

Assets

Cash and cash equivalents
Cash and cash equivalents segregated for regulatory purposes
Receivables:

Customers (net of allowance of $0 at December 31, 2006 and $1,793 at December 31, 2005)
Brokers, dealers and clearing organizations

Deposits with clearing organizations
Securities purchased under agreements to resell

Trading securities owned
Trading securities owned and pledged as collateral

Total trading securities owned

Fixed assets (net of accumulated depreciation and amortization of

$48,603 and $74,840 respectively)

Goodwill
Intangible assets (net of accumulated amortization of

$3,333 and $1,733, respectively)

Other receivables
Other assets
Assets held for sale

Total assets

Liabilities and Shareholders’ Equity

Payables:

Customers
Checks and drafts
Brokers, dealers and clearing organizations
Securities sold under agreements to repurchase
Trading securities sold, but not yet purchased
Accrued compensation
Other liabilities and accrued expenses
Liabilities held for sale

Total liabilities

Subordinated debt

Shareholders’ equity:

Common stock, $0.01 par value; Shares authorized: 100,000,000 at December 31, 2006 and

December 31, 2005; Shares issued: 19,487,319 at December 31, 2006 and December 31, 2005;
Shares outstanding: 16,984,474 at December 31, 2006 and 18,365,177 at December 31, 2005

Additional paid-in capital
Retained earnings
Less common stock held in treasury, at cost: 2,502,845 shares at December 31, 2006 and

1,122,142 at December 31, 2005
Other comprehensive income/(loss)

Total shareholders’ equity

Total liabilities and shareholders’ equity

See Notes to Consolidated Financial Statements

Piper Jaffray Companies

2006

2005

$

39,903
25,000

$

60,869
–

51,441
312,874
30,223
139,927

776,684
89,842

866,526

25,289
231,567

1,467
39,347
88,283
–

54,421
299,056
64,379
222,844

517,310
236,588

753,898

41,752
317,167

3,067
24,626
69,200
442,912

$1,851,847

$2,354,191

$

83,899
13,828
210,955
91,293
217,584
164,346
145,503
–

927,408

$

73,781
53,304
259,597
245,786
332,204
171,551
138,122
145,019

1,419,364

–

180,000

195
723,928
325,684

(126,026)
658

924,439

195
704,005
90,431

(35,422)
(4,382)

754,827

$1,851,847

$2,354,191

Piper Jaffray Annual Report 2006

33

Piper Jaffray Companies

CONSOLIDATED STATEMENTS OF OPERATIONS

YEAR ENDED DECEMBER 31,

(Amounts in thousands, except per share data)

Revenues:

Investment banking
Institutional brokerage

Interest

Other income

Total revenues

Interest expense

Net revenues

Non-interest expenses:

Compensation and benefits
Occupancy and equipment

Communications

Floor brokerage and clearance

Marketing and business development
Outside services

Cash award program

Restructuring-related expense
Other operating expenses

Total non-interest expenses

Income from continuing operations before income tax expense

Income tax expense

Net income from continuing operations

Discontinued operations:

Income from discontinued operations, net of tax

Net income

Earnings per basic common share

Income from continuing operations
Income from discontinued operations

Earnings per basic common share

Earnings per diluted common share

Income from continuing operations

Income from discontinued operations

Earnings per diluted common share

Weighted average number of common shares outstanding

Basic

Diluted

See Notes to Consolidated Financial Statements

34

Piper Jaffray Annual Report 2006

2006

2005

2004

$294,808
162,406

63,969

14,054

535,237

32,303

502,934

$243,347
162,068

$227,667
179,604

44,857

3,530

35,718

13,638

453,802

456,627

32,494

22,421

421,308

434,206

291,265
30,660

23,189

13,292

24,731
28,053

2,980

–

(9,109)

405,061

97,873

34,974

62,899

243,833
30,808

251,187
28,581

23,987

14,785

21,537
23,881

4,205

8,595
13,646

24,757

14,017

24,660
20,378

4,717

–
16,871

385,277

385,168

36,031

10,863

25,168

49,038

16,727

32,311

172,354

$235,253

14,915

18,037

$ 40,083

$ 50,348

$

3.49
9.57

$ 13.07

$

3.32

9.09

$ 12.40

$

$

$

$

1.34
0.79

2.13

1.32

0.78

2.10

$

$

$

$

1.67
0.93

2.60

1.67

0.93

2.60

18,002

18,968

18,813

19,081

19,333

19,399

Piper Jaffray Companies

CONSOLIDATED STATEMENTS OF CHANGES IN
SHAREHOLDERS’ EQUITY

(Amounts in thousands, except share amounts)

Common
Shares
Outstanding

Common
Stock

Additional
Paid-In
Capital

Retained
Earnings

Treasury
Stock

Other
Comprehensive
Income/(Loss)

Total
Shareholders’
Equity

Balance at December 31, 2003

19,334,261

$193

$669,602 $

– $

Net income

Amortization of restricted stock

Amortization of stock options

Minimum pension liability adjustment

–

–

–

–

Retirement of common stock

(1,000)

–

–

–

–

–

–

50,348

7,119

2,034

–

–

–

–

–

–

Balance at December 31, 2004

19,333,261

$193

$678,755 $ 50,348 $

Net income

Amortization of restricted stock

Amortization of stock options

Minimum pension liability adjustment

Foreign currency translation adjustment

Issuance of common stock

Repurchase of common stock

Reissuance of treasury shares

–

–

–

–

–

154,058

(1,300,000)

177,858

–

–

–

–

–

2

–

–

–

40,083

15,914

3,341

–

–

6,010

–

(15)

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

–

(42,612)

7,190

$

–

–

–

–

(3,868)

–

$ 669,795

50,348

7,119

2,034

(3,868)

—

$(3,868)

$ 725,428

–

–

–

(73)

(441)

–

–

–

40,083

15,914

3,341

(73)

(441)

6,012

(42,612)

7,175

Balance at December 31, 2005

18,365,177

$195

$704,005 $ 90,431 $ (35,422)

$(4,382)

$ 754,827

Net income

Amortization of restricted stock

Amortization of stock options

Adjustment to unrecognized pension cost,

net of tax

Foreign currency translation adjustment

Repurchase of common stock

Reissuance of treasury shares

–

–

–

–

–

(1,648,527)

267,824

–

–

–

–

–

–

–

–

235,253

17,893

2,436

–

–

–

(406)

–

–

–

–

–

–

–

–

–

–

–

(100,000)

9,396

–

–

–

2,988

2,052

–

–

235,253

17,893

2,436

2,988

2,052

(100,000)

8,990

Balance at December 31, 2006

16,984,474

$195

$723,928 $325,684 $(126,026)

$

658

$ 924,439

See Notes to Consolidated Financial Statements

Piper Jaffray Annual Report 2006

35

Piper Jaffray Companies

CONSOLIDATED STATEMENTS OF CASH FLOWS

YEAR ENDED DECEMBER 31,

(Amounts in thousands)

Operating Activities:

Net income
Adjustments to reconcile net income to net cash provided by (used in) operating

activities:
Depreciation and amortization
Gain on sale of PCS branch network
Deferred income taxes
Loss on disposal of fixed assets
Stock-based compensation
Amortization of intangible assets
Forgivable loan reserve
Decrease (increase) in operating assets:

Cash and cash equivalents segregated for regulatory purposes
Receivables:
Customers
Brokers, dealers and clearing organizations

Deposits with clearing organizations
Securities purchased under agreements to resell
Net trading securities owned
Other receivables
Other assets

Increase (decrease) in operating liabilities:

Payables:

Customers
Checks and drafts
Brokers, dealers and clearing organizations
Securities sold under agreements to repurchase
Accrued compensation
Other liabilities and accrued expenses

Assets held for sale
Liabilities held for sale

Net cash provided by (used in) operating activities

Investing Activities:

Sale of PCS branch network
Purchases of fixed assets, net
Acquisition, net of cash acquired

Net cash provided by (used in) investing activities

Financing Activities:

Increase (decrease) in securities loaned
(Increase) decrease in securities sold under agreements to repurchase
Decrease in short-term bank financing
Repayment of subordinated debt
Repurchase of common stock
Issuance of common stock from treasury

Net cash provided by (used in) financing activities

Currency adjustment:

Effect of exchange rate changes on cash

Net decrease in cash and cash equivalents
Cash and cash equivalents at beginning of period

Cash and cash equivalents at end of period

Supplemental disclosure of cash flow information —

Cash paid during the period for:

Interest
Income taxes
Noncash financing activities —

Issuance of common stock for retirement plan obligations:
190,966 shares and 331,434 shares for the twelve months ended December 31,

2006 and 2005, respectively

See Notes to Consolidated Financial Statements

36

Piper Jaffray Annual Report 2006

2006

2005

2004

$ 235,253

$ 40,083

$ 50,348

12,644
(381,030)
4,529
12,392
20,329
1,600
–

(25,000)

499
(13,679)
34,156
82,917
(227,341)
(14,721)
(25,357)

10,093
(39,476)
189,378
(10,703)
4,786
7,485
75,021
(26,182)

(72,407)

715,684
(8,314)
—

707,370

(234,676)
(143,790)

—

(180,000)
(100,000)
1,308

(657,158)

1,229

(20,966)
60,869

18,135
–
(475)
320
19,255
1,600
–

21,391
–
6,553
233
9,153
133
(2,100)

–

66,000

(4,285)
237,624
6,507
29,079
(183,634)
(5,462)
7,036

3,494
(297,405)
(4,316)
55,064
27,039
(1,335)
11,302

9,284
(9,966)
(39,699)
(11,031)
110
(1,651)
(38,000)
20,367

(12,620)
(1,333)
21,273
(64)
(9,975)
43,478
34,885
(24,390)

95,197

(3,192)

–
(15,257)
–

–
(13,590)
(16,624)

(15,257)

(30,214)

11,774
(55,456)
–
–
(42,612)
–

41,736
133,621
(159,000)
–
–
–

(86,294)

16,357

(164)

(6,518)
67,387

–

(17,049)
84,436

$ 39,903

$ 60,869

$ 67,387

$ 41,475
$ 204,896

$ 40,174
$ 20,131

$ 16,647
$ 18,949

$

9,013

$ 13,187

$

–

NOTES TO CONSOLIDATED FINANCIAL STATEMENTS

Notes to Consolidated Financial Statements

Note 1 Background

Piper Jaffray Companies is the parent company of Piper
Jaffray & Co. (“Piper Jaffray”), a securities broker
dealer and investment banking firm; Piper Jaffray
Ltd., a firm providing securities brokerage and invest-
ment banking services in Europe headquartered in
London, England; Piper Jaffray Financial Products
Inc., an entity that facilitates customer derivative trans-
actions; Piper Jaffray Financial Products II Inc., an
entity dealing primarily in variable rate municipal
products; and other immaterial subsidiaries. Piper

Jaffray Companies and its subsidiaries (collectively,
the “Company”) operate as one reporting segment
providing investment banking services and institutional
sales, trading and research services. As discussed more
fully in Note 4, the Company completed the sale of its
Private Client Services branch network and certain
related assets to UBS Financial Services, Inc., a subsid-
iary of UBS AG (“UBS”), on August 11, 2006, thereby
exiting the Private Client Services (“PCS”) business.

Note 2 Summary of Significant Accounting Policies

PRINCIPLES OF CONSOLIDATION
The consolidated financial statements include the
accounts of Piper Jaffray Companies, its subsidiaries,
and all other entities in which the Company has a
controlling financial interest. All material intercom-
pany accounts and transactions have been eliminated.
The Company determines whether it has a controlling
financial
in an entity by first evaluating
whether the entity is a voting interest entity, a variable
interest entity (“VIE”), a special-purpose entity
(“SPE”), or a qualifying special-purpose
entity
(“QSPE”) under U.S. generally accepted accounting
principles.

interest

Voting interest entities are entities in which the total
equity investment at risk is sufficient to enable each
entity to finance itself independently and provides the
equity holders with the obligation to absorb losses, the
right to receive residual returns and the right to make
decisions about the entity’s activities. Voting interest
entities are consolidated in accordance with Account-
ing Research Bulletin No. 51, “Consolidated Financial
Statements,” (“ARB 51”), as amended. ARB 51 states
that the usual condition for a controlling financial
interest in an entity is ownership of a majority voting
interest. Accordingly, the Company consolidates voting
interest entities in which it has all, or a majority of, the
voting interest.

As defined in Financial Accounting Standards Board
Interpretation No. 46(R), “Consolidation of Variable
Interest Entities,” (“FIN 46(R)”), VIEs are entities that
lack one or more of the characteristics of a voting
interest entity described above. FIN 46(R) states that
a controlling financial interest in an entity is present
when an enterprise has a variable interest, or combi-
nation of variable interests, that will absorb a majority

of the entity’s expected losses, receive a majority of the
entity’s expected residual returns, or both. The enter-
prise with a controlling financial interest, known as the
primary beneficiary, consolidates the VIE. Accordingly,
the Company consolidates VIEs in which the Company
is deemed to be the primary beneficiary.

SPEs are trusts, partnerships or corporations estab-
lished for a particular limited purpose. The Company
follows the accounting guidance in Statement of Finan-
cial Accounting Standards No. 140, “Accounting for
Transfers and Servicing of Financial Assets and Extin-
guishment of Liabilities,” (“SFAS 140”), to determine
whether or not such SPEs are required to be consoli-
dated. The Company establishes SPEs to securitize
fixed rate municipal bonds. The majority of these
securitizations meet the SFAS 140 definition of a QSPE.
A QSPE can generally be described as an entity with
significantly limited powers that are intended to limit it
to passively holding financial assets and distributing
cash flows based upon predetermined criteria. Based
upon the guidance in SFAS 140, the Company does not
consolidate such QSPEs. The Company accounts for its
involvement with such QSPEs under a financial com-
ponents approach in which the Company recognizes
only its retained residual interest in the QSPE. The
Company accounts for such retained interests at fair
value.

Certain SPEs do not meet the QSPE criteria due to their
permitted activities not being sufficiently limited or to
control remaining with one of the owners. These SPEs
are typically considered VIEs and are reviewed under
FIN 46(R) to determine the primary beneficiary.

When the Company does not have a controlling finan-
cial interest in an entity but exerts significant influence

Piper Jaffray Annual Report 2006

37

Notes to Consolidated Financial Statements

over the entity’s operating and financial policies (gen-
erally defined as owning a voting or economic interest
of between 20 percent to 50 percent), the Company
accounts for its investment in accordance with the
equity method of accounting prescribed by Accounting
Principles Board Opinion No. 18, “The Equity Method
of Accounting for Investments in Common Stock.”
(“APB 18”), If the Company does not have a control-
ling financial interest in, or exert significant influence
over, an entity, the Company accounts for its invest-
ment at fair value.

USE OF ESTIMATES
The preparation of financial statements and related
disclosures in conformity with U.S. generally accepted
accounting principles requires management to make
estimates and assumptions that affect the reported
amounts of assets and liabilities at the date of the
financial statements and the reported amounts of rev-
enues and expenses during the reporting period. Actual
results could differ from those estimates.

CASH AND CASH EQUIVALENTS
Cash and cash equivalents consist of cash and highly
liquid investments with maturities of 90 days or less at
the date of purchase.

In accordance with Rule 15c3-3 of the Securities
Exchange Act of 1934, Piper Jaffray, as a registered
broker dealer carrying customer accounts, is subject to
requirements related to maintaining cash or qualified
securities in a segregated reserve account for the exclu-
sive benefit of its customers.

COLLATERALIZED SECURITIES TRANSACTIONS
Securities purchased under agreements to resell and
securities sold under agreements to repurchase are car-
ried at the contractual amounts at which the securities
will be subsequently resold or repurchased, including
accrued interest. It is the Company’s policy to take
possession or control of securities purchased under
agreements to resell at the time these agreements are
entered into. The counterparties to these agreements
typically are primary dealers of U.S. government secu-
rities and major financial institutions. Collateral is
valued daily, and additional collateral is obtained from
or refunded to counterparties when appropriate.

Securities borrowed and loaned result from transac-
tions with other broker dealers or financial institutions
and are recorded at the amount of cash collateral
advanced or received. These amounts are included in
receivables from and payable to brokers, dealers and
clearing organizations on the consolidated statements
borrowed
of

condition.

Securities

financial

38

Piper Jaffray Annual Report 2006

transactions require the Company to deposit cash or
other collateral with the lender. Securities loaned trans-
actions require the borrower to deposit cash with the
Company. The Company monitors the market value of
securities borrowed and loaned on a daily basis, with
additional collateral obtained or refunded as necessary.

Interest is accrued on securities borrowed and loaned
transactions and is included in other receivables and
other liabilities and accrued expenses on the consoli-
dated statements of financial condition and the respec-
tive interest income and expense balances on the
consolidated statements of operations.

CUSTOMER TRANSACTIONS
Customer securities transactions are recorded on a
settlement date basis, while the related revenues and
expenses are recorded on a trade date basis. Customer
receivables and payables include amounts related to
both cash and margin transactions. Securities owned by
customers, including those that collateralize margin or
other similar transactions, are not reflected on the
consolidated statements of financial condition.

REVENUE RECOGNITION
Investment Banking – Investment banking revenues,
which include underwriting fees, management fees
and advisory fees, are recorded when services for the
transactions are completed under the terms of each
engagement. Expenses associated with such transac-
tions are deferred until the related revenue is recognized
or the engagement is otherwise concluded. Investment
banking revenues are presented net of related expenses.
Expenses related to investment banking deals not com-
pleted are recognized as non-interest expenses on the
statement of operations.

Institutional Brokerage – Institutional brokerage reve-
nues include (i) commissions received from customers
for the execution of brokerage transactions in listed
and over — the — counter (OTC) equity, fixed income
and convertible debt securities, which are recorded on a
trade date basis; (ii) trading gains and losses and
(iii) fees received by the Company for equity research.

ALLOWANCE FOR DOUBTFUL ACCOUNTS
Management estimates an allowance for doubtful
accounts to reserve for probable losses from unsecured
and partially secured customer accounts. Management
is continually evaluating its receivables from customers
for collectibility and possible write-off by examining
the facts and circumstances surrounding each customer
where a loss is deemed possible.

FIXED ASSETS
Fixed assets include furniture and equipment, software
and leasehold improvements. Depreciation of furniture
and equipment and software is provided using the
straight-line method over estimated useful lives of three
to ten years. Leasehold improvements are amortized
over their estimated useful life or the life of the lease,
whichever
shorter. Additionally, certain costs
incurred in connection with internal-use software
projects are capitalized and amortized over
the
expected useful life of the asset, generally three to seven
years.

is

LEASES
The Company leases its corporate headquarters and
other offices under various non-cancelable leases. The
leases require payment of real estate taxes, insurance
and common area maintenance, in addition to rent.
The terms of the Company’s lease agreements generally
range up to 10 years. Some of the leases contain
renewal options, escalation clauses, rent free holidays
and operating cost adjustments.

For leases that contain escalations and rent-free holi-
days, the Company recognizes the related rent expense
on a straight-line basis from the date the Company
takes possession of the property to the end of the initial
lease term. The Company records any difference
between the straight-line rent amounts and amounts
payable under the leases in other liabilities and accrued
expenses on the consolidated statements of financial
condition.

Cash or lease incentives received upon entering into
certain leases are recognized on a straight-line basis as a
reduction of rent expense from the date the Company
takes possession of the property or receives the cash to
the end of the initial lease term. The Company records
the unamortized portion of lease incentives in other
liabilities and accrued expenses on the consolidated
statements of financial condition.

GOODWILL AND INTANGIBLE ASSETS
Goodwill represents the excess of purchase price over
the fair value of net assets acquired using the purchase
method of accounting. The recoverability of goodwill is
evaluated annually, at a minimum, or on an interim
basis if events or circumstances indicate a possible
inability to realize the carrying amount. The evaluation
includes assessing the estimated fair value of the good-
will based on market prices for similar assets, where
available, and the present value of the estimated future
cash flows associated with the goodwill.

Notes to Consolidated Financial Statements

Intangible assets with determinable lives consist of
software technologies
that are amortized on a
straight-line basis over three years.

OTHER RECEIVABLES
Other receivables includes management fees receivable,
accrued interest and loans made to revenue-producing
employees, typically in connection with their recruit-
ment. These loans are forgiven based on continued
employment and are amortized to compensation and
benefits using the straight-line method over the respec-
tive terms of the loans, which generally range up to
three years.

Inc.

OTHER ASSETS
Other assets includes investments in partnerships,
investments to fund deferred compensation liabilities,
prepaid expenses, and net deferred tax assets. In addi-
tion, other assets includes 55,440 restricted shares of
NYSE Group, Inc. common stock. On March 7, 2006,
upon the consummation of the merger of the New York
Stock Exchange,
(“NYSE”) and Archipelago
Holdings, Inc., NYSE Group, Inc. became the parent
company of New York Stock Exchange, LLC (which is
the successor to the NYSE) and Archipelago Holdings,
Inc. In connection with the merger, the Company
received $0.8 million in cash and 157,202 shares of
NYSE Group, Inc. common stock in exchange for the
two NYSE seats owned by the Company. The Com-
pany sold 101,762 shares of NYSE Group, Inc. com-
mon stock in a secondary offering during the second
quarter of 2006 and the remainder of the shares are
subject to restrictions on transfer.

FAIR VALUE OF FINANCIAL INSTRUMENTS
Substantially all of the Company’s financial instru-
ments are recorded on the Company’s consolidated
statements of financial condition at fair value or the
contract amount. The fair value of a financial instru-
ment is the amount at which the instrument could be
exchanged in a current transaction between willing
parties, other than in a forced or liquidation sale.

Trading securities owned and trading securities sold,
but not yet purchased are recorded on a trade date basis
and are stated at market or fair value. The Company’s
valuation policy is to use quoted market or dealer prices
from independent sources where they are available and
reliable. A substantial percentage of the fair values
recorded for the Company’s trading securities owned
and trading securities sold, but not yet purchased are
based on observable market prices. The fair values of
trading securities for which a quoted market or dealer
price is not available are based on management’s esti-
mate, using the best information available, of amounts

Piper Jaffray Annual Report 2006

39

Notes to Consolidated Financial Statements

that could be realized under current market conditions.
Among the factors considered by management in deter-
mining the fair value of these securities are the cost,
terms and liquidity of the investment, the financial
condition and operating results of the issuer, the quoted
market price of securities with similar quality and yield
that are publicly traded, and other factors generally
pertinent to the valuation of investments.

The fair value of over-the-counter derivative contracts
are valued using valuation models. The model prima-
rily used by the Company is the present value of cash
flow model, as most of the Company’s derivative prod-
ucts are interest rate swaps. This model requires inputs
including contractual
terms, market prices, yield
curves, credit curves and measures of volatility.

Financial instruments carried at contract amounts that
approximate fair value either have short-term maturi-
ties (one year or less), are repriced frequently, or bear
market interest rates and, accordingly, are carried at
amounts approximating fair value. Financial instru-
ments carried at contract amounts on the consolidated
statements of financial condition include receivables
from and payables to brokers, dealers and clearing
organizations, securities purchased under agreements
to resell, securities sold under agreements to repur-
chase, receivables from and payables to customers,
short-term financing and subordinated debt.

The carrying amount of subordinated debt closely
approximated fair value based upon market rates of
interest available to the Company at December 31,
2005.

INCOME TAXES
Income tax expense is recorded using the asset and
liability method. Deferred tax assets and liabilities are
recognized for the expected future tax consequences
attributable to temporary differences between amounts
reported for income tax purposes and financial state-
ment purposes, using current tax rates. A valuation
allowance is recognized if it is anticipated that some or
all of a deferred tax asset will not be realized.

Financial Accounting Standards No. 123, “Accounting
and Disclosure of
Stock-Based Compensation,”
(“SFAS 123”), as amended by Statement of Financial
Accounting Standards No. 148, “Accounting for
Stock-Based Compensation — Transition and Disclo-
sure,” (“SFAS 148”).

123(R),

“Share-Based

Effective January 1, 2006, the Company adopted the
provisions of Statement of Financial Accounting Stan-
dards No.
Payment,”
(“SFAS 123(R)”), using the modified prospective tran-
sition method. SFAS 123(R)requires all stock-based
compensation to be expensed in the consolidated state-
ment of operations at fair value, net of estimated for-
feitures. Because the Company historically expensed all
equity awards based on the fair value method, net of
estimated forfeitures, SFAS 123(R) did not have a
material effect on the Company’s measurement or rec-
ognition methods for stock-based compensation.

EARNINGS PER SHARE
Basic earnings per common share is computed by divid-
ing net income by the weighted average number of
common shares outstanding for the year. Diluted earn-
ings per common share is calculated by adjusting the
weighted average outstanding shares to assume con-
version of all potentially dilutive restricted stock and
stock options.

FOREIGN CURRENCY TRANSLATION
The Company consolidates a foreign subsidiary, which
has designated its local currency as its functional cur-
rency. Assets and liabilities of this foreign subsidiary
are translated at year-end rates of exchange, and state-
ment of operations accounts are translated at an aver-
age rate for the period. In accordance with Statement of
Financial Accounting Standards No. 52, “Foreign Cur-
rency Translation,” (“SFAS 52”), gains or losses result-
ing from translating foreign currency financial
statements are reflected in other comprehensive
income, a separate component of shareholders’ equity.
Gains or losses resulting from foreign currency trans-
actions are included in net income.

STOCK-BASED COMPENSATION
Effective January 1, 2004, the Company adopted the
fair value method of accounting for grants of stock-
based compensation, as prescribed by Statement of

RECLASSIFICATIONS
Certain prior period amounts have been reclassified to
conform to the current year presentation.

Note 3 Recent Accounting Pronouncements

In February 2006, the Financial Accounting Standards
Board (“FASB”)
issued Statement of Financial
Accounting Standards No. 155, “Accounting for

40

Piper Jaffray Annual Report 2006

Certain Hybrid Financial Instruments,” (“SFAS 155”),
which amends Statement of Financial Accounting Stan-
for Derivative
dards No.

“Accounting

133,

Instruments and Hedging Activities,”(“SFAS 133”),
and SFAS 140. The provisions of SFAS 155 provide a
fair value measurement option for certain hybrid finan-
cial instruments that contain an embedded derivative
that would otherwise require bifurcation. SFAS 155
also provides clarification that only the simplest sepa-
rations of interest payments and principal payments
qualify for the exception afforded to interest-only strips
and principal-only strips from derivative accounting
under paragraph 14 of SFAS 133. The standard also
clarifies that concentration of credit risk in the form of
subordination are not embedded derivatives. Lastly, the
new standard amends SFAS 140 to eliminate the pro-
hibition on a qualifying special purpose entity from
holding a derivative financial instrument that pertains
to a beneficial interest other than another derivative
instrument. SFAS 155 is effective for the
financial
Company for all financial
instruments acquired or
issued beginning January 1, 2007. Management does
not believe the adoption of SFAS 155 will have a
material effect on the consolidated financial statements
of the Company.

In March 2006, the FASB issued Statement of Financial
Accounting Standards No. 156, “Accounting for Servic-
ing of Financial Assets,” (“SFAS 156”), which amends
SFAS 140 with respect to the accounting for separately
recognized servicing assets and servicing liabilities. This
statement requires an entity to recognize a servicing asset
or liability each time it undertakes an obligation to service
a financial asset by entering into a servicing contract in
certain situations. SFAS 156 also requires servicing assets
and servicing liabilities to be initially measured at fair
value. The statement permits an entity to subsequently
measure each class of separately recognized servicing
assets and servicing liabilities by either the amortization
method or the fair value method. The amortization
method allows the servicing asset or liability to be amor-
tized in proportion to and over the period of estimated net
service income (loss), and assess the servicing assets or
servicing liabilities for impairment or increased obligation
based on fair value at each reporting period. Alternatively,
an entity may choose the fair value method and measure
the servicing asset or servicing liability at fair value at each
reporting date and report changes in fair value in earnings
in the period the changes occur. SFAS 156 also permits, at
its initial adoption, a one-time reclassification of availa-
ble-for-sale securities to trading securities as long as the
available-for-sale securities are identified in some manner
as economic hedges of servicing assets and servicing lia-
bilities that a servicer elects to subsequently measure at
fair value. SFAS 156 applies to all separately recognized
servicing assets and servicing liabilities acquired or issued
after the beginning of an entity’s fiscal year that begins
after September 15, 2006, although early adoption is

Notes to Consolidated Financial Statements

permitted. The Company adopted the provisions of
SFAS 156 as of January 1, 2006. The adoption of
SFAS 156 did not have a material impact to the Compa-
ny’s consolidated financial statements.

In June 2006, the FASB issued FASB Interpretation
No. 48, “Accounting for Uncertainty in Income Tax-
es — an interpretation of FASB Statement 109”
(“FIN 48”). FIN 48 clarifies the accounting for uncer-
tainty in income taxes recognized in accordance with
FASB Statement No. 109, “Accounting for Income
Taxes.” FIN 48 prescribes a two-step process to rec-
ognize and measure a tax position taken or expected to
be taken in a tax return. The first step is recognition,
whereby a determination is made whether it is more-
likely-than-not that a tax position will be sustained
upon examination based on the technical merits of the
position. The second step is to measure a tax position
that meets the recognition threshold to determine the
amount of benefit to recognize. FIN 48 also provides
guidance on derecognition, classification, interest and
penalties, accounting in interim periods, disclosure and
transition. FIN 48 is effective for fiscal years beginning
after December 15, 2006. Management is currently
evaluating the impact of FIN 48, however, management
currently does not believe the adoption of FIN 48 will
have a material effect on the consolidated financial
statements of the Company.

In September 2006, the Securities and Exchange Com-
issued Staff Accounting Bulle-
mission (“SEC”)
tin No. 108, “Considering the Effects of Prior Year
Misstatements when Quantifying Misstatements in
Current Year Financial Statements” (“SAB 108”).
SAB 108 requires the evaluation of prior year misstate-
ments in quantifying misstatements in the current year
financial statements. SAB 108 is effective for fiscal
years ending after November 15, 2006. In the initial
year of adoption, the cumulative effect of applying
SAB 108, if any, will be recorded as an adjustment to
the beginning balance of retained earnings. In subse-
quent years, previously undetected material misstate-
ments require restatement of the financial statements.
The adoption of SAB 108 did not impact the Compa-
ny’s consolidated results of operations or financial
condition.

In September 2006, the FASB issued Statement of
Financial Accounting Standard No. 157, “Fair Value
Measurements” (“SFAS 157”). SFAS 157 defines fair
value, establishes a framework for measuring fair value
and expands disclosures regarding fair value measure-
ments. SFAS 157 does not require any new fair value
measurements, but its application may, for some enti-
ties, change current practice. SFAS 157 is effective for
fiscal years beginning after November 15, 2007. The

Piper Jaffray Annual Report 2006

41

Notes to Consolidated Financial Statements

Company is currently evaluating the impact of
SFAS 157 on the Company’s consolidated results of
operations and financial condition.

In September 2006, the FASB issued SFAS No. 158,
“Employers’ Accounting for Defined Benefit Pension
and Other Postretirement Plans — an amendment of
FASB Statements No. 87, 88, 106 and 132(R)”
(“SFAS 158”). SFAS 158 requires an employer to rec-
ognize the overfunded or underfunded status of a
defined benefit postretirement plan (other than a multi-
employer plan) as an asset or liability in its statement of
financial position and to recognize changes in the
funded status in the year in which the changes occur
through comprehensive income. In addition, SFAS 158
requires disclosure in the notes to the financial

statements of the estimated portion of net actuarial
gains or losses, prior service costs or credits and tran-
sition assets or obligations in other comprehensive
income that will be recognized in net periodic benefit
cost over the fiscal year. These requirements are effec-
tive for fiscal years ending after December 15, 2006.
SFAS 158 also requires employers to measure plan
assets and benefit obligations as of the date of its
year-end statement of financial position. This require-
ment is effective for fiscal years ending after Decem-
ber 15, 2008.

The Company adopted the measurement provisions of
SFAS 158 as of December 31, 2006. The adoption of
SFAS 158 did not have a material impact to the Com-
pany’s consolidated financial statements.

Note 4 Discontinued Operations

On August 11, 2006, the Company and UBS completed
the sale of the Company’s PCS branch network under a
previously announced asset purchase agreement. The
purchase price under the asset purchase agreement was
approximately $750 million, which included $500 mil-
lion for the branch network and approximately
$250 million for the net assets of the branch network,
consisting principally of customer margin receivables.

In accordance with the provisions of Statement of
Financial Accounting Standards No. 144, “Accounting
for the Impairment or Disposal of Long-Lived Assets”
(“SFAS 144”), the results of PCS operations have been
classified as discontinued operations for all periods
presented and the related assets and liabilities included
in the sale have been classified as held for sale. The
Company recorded income from discontinued opera-
tions net of tax of $172.4 million for the twelve months
ended December 31, 2006. The Company has reclas-
sified $442.9 million in assets and $145.0 million in
liabilities as held for sale as of December 31, 2005
related to the sale of the PCS branch network to UBS.

Note 5 Derivatives

Derivative contracts are financial instruments such as
forwards, futures, swaps or option contracts that derive
their value from underlying assets, reference rates,
indices or a combination of these factors. A derivative
contract generally represents future commitments to
purchase or sell financial instruments at specified terms
on a specified date or to exchange currency or interest
payment streams based on the contract or notional
amount. Derivative contracts exclude certain cash
instruments, such as mortgage-backed securities, inter-
est-only and principal-only obligations and indexed

42

Piper Jaffray Annual Report 2006

Upon completion of the sale of the PCS branch network
on August 11, 2006, the assets and liabilities related to
the PCS branch network were transferred to UBS.

In connection with the sale of the Company’s PCS
branch network, the Company initiated a plan to sig-
nificantly restructure the Company’s support infra-
structure. As described more fully in Note 16, the
Company incurred $60.7 million in restructuring costs
related to the restructuring plan for the twelve months
ended December 31, 2006. All restructuring and trans-
action costs related to the sale of the PCS branch
network are included within discontinued operations
in accordance with SFAS 144. The Company expects to
incur additional restructuring costs in 2007 related to
transitioning off of a retail based back office system as
the Company converts to a capital markets back office
system. In addition, the Company may incur discon-
tinued operations expense or income related to changes
in litigation reserve estimates for retained PCS litiga-
tion matters and for changes in estimates to occupancy
and severance restructuring charges.

debt instruments that derive their values or contractu-
ally required cash flows from the price of some other
security or index.

The Company uses interest rate swaps, interest rate
locks, and forward contracts to facilitate customer
transactions and as a means to manage risk in certain
inventory positions. The Company also enters into
interest rate swap agreements to manage interest rate
exposure associated with holding residual interest secu-
rities from its tender option bond program. As of

Notes to Consolidated Financial Statements

December 31, 2006 and 2005, the Company was
counterparty to notional/contract amounts of $5.8 bil-
lion and $4.6 billion,
respectively, of derivative
instruments.

The market or fair values related to derivative contract
transactions are reported in trading securities owned
and trading securities sold, but not yet purchased on the
consolidated statements of financial condition and any
unrealized gain or loss resulting from changes in fair
values of derivatives is recognized in institutional bro-
kerage on the consolidated statements of operations.
The Company does not utilize “hedge accounting” as
described within SFAS No. 133. Derivatives are
reported on a net-by-counterparty basis when a legal
right of offset exists under a legally enforceable master

netting agreement in accordance with FASB Interpre-
tation No. 39, “Offsetting of Amounts Related to
Certain Contracts.”

Fair values for derivative contracts represent amounts
estimated to be received from or paid to a counterparty
in settlement of these instruments. These derivatives are
valued using quoted market prices when available or
pricing models based on the net present value of esti-
mated future cash flows. The valuation models used
require inputs including contractual terms, market
prices, yield curves, credit curves and measures of vol-
atility. The net fair value of derivative contracts was
approximately $19.7 million and $17.0 million as of
December 31, 2006 and 2005, respectively.

Note 6 Securitizations

In connection with its tender option bond program, the
Company securitizes highly rated municipal bonds. At
December 31, 2006 and 2005, the Company had
$279.2 million and $298.5 million, respectively, of
municipal bonds in securitization. Each municipal
bond is sold into a separate trust that is funded by
the sale of variable rate certificates to institutional
customers seeking variable rate tax-free investment
products. These variable rate certificates
reprice
weekly. Securitization transactions meeting certain
SFAS 140 criteria are treated as sales, with the resulting
gain included in institutional brokerage on the consol-
idated statements of operations. If a securitization does
not meet the sale-of-asset requirements of SFAS 140,
the transaction is recorded as a borrowing. The Com-
pany retains a residual interest in each structure and
accounts for the residual interest as a trading security,
which is recorded at fair value on the consolidated
statements of financial condition. The fair value of
retained interests was $8.1 million and $7.3 million
at December 31, 2006 and 2005, respectively, with a
weighted average life of 8.4 years and 9.3 years, respec-
tively. The fair value of retained interests is estimated
based on the present value of future cash flows using
management’s best estimates of the key assumptions —
expected yield, credit losses of 0 percent and a 12 per-
cent discount rate. The Company receives a fee to
remarket the variable rate certificates derived from
the securitizations.

At December 31, 2006, the sensitivity of the current fair
value of retained interests to immediate 10 percent and
20 percent adverse changes in the key economic
assumptions was not material. The sensitivity analysis
does not include the offsetting benefit of financial

instruments the Company utilizes to hedge risks inher-
ent in its retained interests and is hypothetical. Changes
in fair value based on a 10 percent or 20 percent vari-
ation in an assumption generally cannot be extrapo-
lated because the relationship of the change in the
assumption to the change in the fair value may not
be linear. Also, the effect of a variation in a particular
assumption on the fair value of the retained interests is
calculated independent of changes
in any other
assumption; in practice, changes in one factor may
result in changes in another, which might magnify or
counteract the sensitivities. In addition, the sensitivity
analysis does not consider any corrective action that the
Company might take to mitigate the impact of any
adverse changes in key assumptions.

Certain cash flow activity for the municipal bond
securitizations described above during 2006, 2005,
and 2004 includes:

(Amounts in thousands)

Proceeds from new
securitizations

Remarketing fees received

Cash flows received on
retained interests

2006

2005

2004

$7,578

132

$22,655

$98,822

132

98

6,019

8,465

6,725

Three securitization transactions were designed such
that they did not meet the asset sale requirements of
SFAS 140; therefore, the Company has consolidated
these trusts. As a result, the Company recorded an asset
for the underlying bonds of $51.2 million and
$45.1 million as of December 31, 2006 and 2005,
respectively, in trading securities owned and a liability
for the certificates sold by the trust for $50.1 million
and $44.9 million, respectively, in other liabilities and

Piper Jaffray Annual Report 2006

43

Notes to Consolidated Financial Statements

accrued expenses on the consolidated statement of
financial condition.

which have been recorded at fair value and resulted in a
liability of approximately $5.7 and $4.2 million at
December 31, 2006 and 2005, respectively.

The Company enters into interest rate swap agreements
to manage interest rate exposure associated with hold-
ing residual interest securities from its securitizations,

Note 7 Variable Interest Entities

In the normal course of business, the Company regu-
larly creates or transacts with entities that may be VIEs.
These entities are either securitization vehicles or
investment vehicles.

The Company acts as transferor, seller, investor, or
structurer in securitizations. These transactions typi-
cally involve entities that are qualifying special purpose
entities as defined in SFAS 140. For further discussion
on these types of transactions, see Note 6.

The Company has investments in and/or acts as the
managing partner or member to approximately 19
partnerships and limited liability companies (“LLCs”).
These entities were established for the purpose of
companies. At
investing

emerging

growth

in

December 31, 2006, the Company’s aggregate net
investment in these partnerships and LLCs totaled
$12.8 million. The Company’s remaining commitment
to these partnerships and LLCs was $5.9 million at
December 31, 2006.

The Company has identified one LLC described above
as a VIE. Furthermore, it was determined that the
Company is not the primary beneficiary of this VIE.
However, the Company owns a significant variable
interest in the VIE. The VIE had assets approximating
$9.3 million at December 31, 2006. The Company’s
exposure to loss from this entity is $1.1 million, which
is the value of its capital contribution at December 31,
2006.

Note 8 Receivables from and Payables to Brokers,
Dealers and Clearing Organizations

The Company operates a stock loan conduit business.
The business consists of a “matched book” where the
Company will borrow a security from an independent
party in the securities business and then loan the exact
same security to a third party who needs the security.
The Company earns interest income on the securities
borrowed and pays interest expense on the securities
loaned, earning a net spread on the transactions.
Deposits paid for securities borrowed and deposits
received for securities loaned approximate the market
value of the securities. Securities failed to deliver and
receive represent the contract value of securities that
have not been delivered or received by the Company on
settlement date.

Amounts receivable from brokers, dealers and clearing
organizations at December 31 included:

(Amounts in thousands)

2006

2005

Receivable arising from unsettled

securities transactions, net

Deposits paid for securities borrowed

Receivable from clearing organizations

Securities failed to deliver
Other

$ 18,233

271,028

$108,454
92,495

6,811

1,674

15,128

50,236

34,946
12,925

$312,874

$299,056

Amounts payable to brokers, dealers and clearing orga-
nizations at December 31 included:

(Amounts in thousands)

Deposits received for securities loaned
Payable to clearing organizations

Securities failed to receive

Other

2006

2005

$189,214

17,140

4,531

70

$234,676
8,117

16,609

195

$210,955

$259,597

44

Piper Jaffray Annual Report 2006

Notes to Consolidated Financial Statements

Note 9 Receivables from and Payables to Customers

Amounts receivable from customers at December 31
included:

Amounts payable to customers at December 31
included:

(Amounts in thousands)

Cash accounts

Margin accounts

Total receivables

2006

$27,407

24,034

$51,441

2005

(Amounts in thousands)

$25,778

28,643

$54,421

Cash accounts

Margin accounts

Total payables

2006

2005

$ 43,714

40,185

$83,899

$60,249

13,532

$73,781

Securities owned by customers are held as collateral for
margin loan receivables. This collateral is not reflected
on the consolidated financial statements. Margin loan
receivables earn interest at floating interest rates based
on prime rates.

Payables to customers primarily comprise certain cash
balances in customer accounts consisting of customer
funds pending settlement of securities transactions and
customer funds on deposit. Except for amounts arising
from customer short sales, all amounts payable to
customers are subject to withdrawal by customers
upon their request.

Note 10 Collateralized Securities Transactions

The Company’s financing and customer securities
activities involve the Company using securities as col-
lateral. In the event that the counterparty does not meet
its contractual obligation to return securities used as
collateral, or customers do not deposit additional secu-
rities or cash for margin when required, the Company
may be exposed to the risk of reacquiring the securities
or selling the securities at unfavorable market prices in
order to satisfy its obligations to its customers or
counterparties. The Company seeks to control this risk
by monitoring the market value of securities pledged or
used as collateral on a daily basis and requiring adjust-
ments in the event of excess market exposure.

In the normal course of business, the Company obtains
securities purchased under agreements to resell, secu-
rities borrowed and margin agreements on terms that
permit it to repledge or resell the securities to others.
The Company obtained securities with a fair value of
approximately $434.2 million and $904.3 million at
December 31, 2006 and 2005, respectively, of which
$314.3 million and $454.0 million, respectively, has
been either pledged or otherwise transferred to others
in connection with the Company’s financing activities
or to satisfy its commitments under trading securities
sold, but not yet purchased.

Note 11 Goodwill and Intangible Assets

The following table presents the changes in the carrying value of goodwill and intangible assets for the year ended
December 31, 2006:

(Amounts in thousands)

Goodwill
Balance at December 31, 2005
Goodwill acquired
Goodwill disposed in PCS sale
Impairment losses

Balance at December 31, 2006

Intangible assets
Balance at December 31, 2005
Intangible assets acquired
Amortization of intangible assets
Impairment losses

Balance at December 31, 2006

Continuing
Operations

Discontinued
Operations

Consolidated
Company

$231,567
–
–
–

$231,567

$ 3,067
–
(1,600)
–

$ 85,600
–
(85,600)
–

$

$

–

–
–
–
–

–

$317,167
–
(85,600)
–

$231,567

$ 3,067
–
(1,600)
–

$ 1,467

$ 1,467

$

Piper Jaffray Annual Report 2006

45

Notes to Consolidated Financial Statements

Note 12 Trading Securities Owned and Trading Securities Sold,
but Not Yet Purchased

At December 31, trading securities owned and trading
securities sold, but not yet purchased were as follows:
2005

(Amounts in thousands)

2006

Owned:

Corporate securities:
Equity securities
Convertible securities
Fixed income securities

Asset-backed securities
U.S. government securities
Municipal securities

Other

Sold, but not yet purchased:

Corporate securities:
Equity securities
Convertible securities
Fixed income securities

Asset-backed securities
U.S. government securities
Municipal securities
Other

$ 14,163
59,118
235,120
158,108
10,715
364,160

25,142

$ 13,260
9,221
68,017
329,057
26,652
286,531

21,160

$866,526

$753,898

$ 31,452
2,543
16,378
51,001
109,719
5
6,486

$ 8,367
2,572
31,588
157,132
127,833
93
4,619

$217,584

$332,204

Note 13 Fixed Assets

The following is a summary of fixed assets as of Decem-
ber 31, 2006 and 2005:

(Amounts in thousands)

Furniture and equipment

Leasehold improvements

Software
Projects in process

Total

Less accumulated depreciation and

amortization

2006

2005

$38,514

$ 48,285

18,518

15,601
1,259

19,189

47,813
1,305

73,892

116,592

48,603

74,840

$25,289

$ 41,752

At December 31, 2006, and December 31, 2005, trad-
ing securities owned in the amount of $89.8 million and
$236.6 million, respectively, had been pledged as col-
lateral for the Company’s secured borrowings, repur-
chase agreements and securities loaned activities.

Trading securities sold, but not yet purchased represent
obligations of the Company to deliver the specified
security at the contracted price, thereby creating a
liability to purchase the security in the market at pre-
vailing prices. The Company is obligated to acquire the
securities sold short at prevailing market prices, which
may exceed the amount reflected on the consolidated
statements of financial condition. The Company eco-
nomically hedges changes in market value of its trading
securities owned utilizing trading securities sold, but
not yet purchased, interest rate swaps, futures and
exchange-traded options.

For the years ended December 31, 2006, 2005 and 2004,
depreciation and amortization of furniture and equip-
ment, software and leasehold improvements for con-
tinuing operations totaled $9.5 million, $11.4 million
and $12.5 million, respectively, and are included in
occupancy and equipment on the consolidated state-
ments of operations.

Note 14 Financing

The Company had uncommitted credit agreements
with banks totaling $675 million at December 31,
2006 and 2005, comprised of $555 million in discre-
tionary secured lines under which no amount was
outstanding at December 31, 2006 and 2005, and
$120 million in discretionary unsecured lines under
which no amount was outstanding at December 31,

2006 and 2005. In addition, the Company has estab-
lished arrangements to obtain financing using as col-
lateral the Company’s securities held by its clearing
bank and by another broker dealer at the end of each
business day. Repurchase agreements and securities
loaned to other broker dealers are also used as sources
of funding.

46

Piper Jaffray Annual Report 2006

Notes to Consolidated Financial Statements

On August 15, 2006 the Company utilized proceeds
from the sale of its PCS branch network to pay in full its
$180 million subordinated loan with U.S. Bancorp.

The Company’s short-term financing bears interest at
rates based on the federal funds rate. At December 31,
2006 and December 31, 2005, the weighted average

interest rate on borrowings was 5.72 percent and
5.55 percent, respectively. At December 31, 2006
and December 31, 2005, no formal compensating bal-
ance agreements existed, and the Company was in
compliance with all debt covenants related to these
facilities.

Note 15 Contingencies, Commitments and Guarantees

arbitration and regulatory proceedings and other fac-
tors, the amounts of reserves are difficult to determine
and of necessity subject to future revision. Subject to
the foregoing, management of the Company believes,
based on its current knowledge, after consultation with
outside legal counsel and after taking into account its
established reserves, the U.S. Bancorp indemnity agree-
ment and the assumption by UBS of certain liabilities of
the PCS business, that pending legal actions, investiga-
tions and proceedings will be resolved with no material
adverse effect on the consolidated financial condition
of the Company. However, if during any period a
potential adverse contingency should become probable
or resolved for an amount in excess of the established
reserves, U.S. Bancorp indemnification and/or the
assumption obligation of UBS, the results of operations
in that period could be materially adversely affected.

Litigation-related expenses charged to continuing oper-
ations included within other operating expenses were a
positive benefit of $21.4 million, expense of $3.5 mil-
lion, and expense of $3.0 million for the years ended
December 31, 2006, 2005 and 2004, respectively. Lit-
igation-related expenses in 2006 were a positive benefit
of $21.4 million due to a reduction of a litigation
reserve related to developments in a specific indus-
try-wide litigation matter in which the Company, along
with other leading securities firms, is a defendant.

CONTRACTUAL COMMITMENTS
The Company leases office space throughout
the
United States and in a limited number of foreign coun-
tries where the Company’s international operations
reside. The Company’s only material lease is for its
located in Minneapolis,
corporate headquarters

In the normal course of business, the Company main-
tains contingency reserves and enters into various com-
mitments and guarantees, the most significant of which
are as follows:

LEGAL CONTINGENCIES
The Company has been named as a defendant in various
legal proceedings arising primarily from securities bro-
kerage and investment banking activities, including cer-
tain class actions that primarily allege violations of
securities laws and seek unspecified damages, which could
be substantial. Also, the Company is involved from time
to time in investigations and proceedings by governmental
agencies and self-regulatory organizations.

The Company has established reserves for potential
losses that are probable and reasonably estimable that
may result from pending and potential complaints,
legal actions, investigations and proceedings. In addi-
tion to the Company’s established reserves, U.S. Ban-
corp has agreed to indemnify the Company in an
amount up to $17.5 million for certain legal and reg-
ulatory matters. Approximately $13.2 million of this
amount remained available as of December 31, 2006.

As part of the asset purchase agreement between UBS
and the Company for the sale of the PCS branch net-
work, UBS agreed to assume certain liabilities of the PCS
business, including certain liabilities and obligations
arising from litigation, arbitration, customer complaints
and other claims related to the PCS business. In certain
cases we have agreed to indemnify UBS for litigation
matters after UBS has incurred costs of $6.0 million
related to these matters. In addition, we have retained
liabilities arising from regulatory matters and certain
litigation relating to the PCS business prior to the sale.
The amount of loss in excess of the $6.0 million indem-
nification threshold and for other PCS litigation matters
deemed to be probable and reasonably estimable are
included in the Company’s established reserves. Adjust-
ment to litigation reserves for matters pertaining to the
PCS business are included within discontinued opera-
tions on the consolidated statements of operations.

Given uncertainties regarding the timing, scope, vol-
ume and outcome of pending and potential litigation,

Piper Jaffray Annual Report 2006

47

Notes to Consolidated Financial Statements

Minnesota. Aggregate minimum lease commitments
under operating leases as of December 31, 2006 are
as follows:

Accordingly, no liability is recorded in the consolidated
financial statements for these arrangements.

(Amounts in thousands)

2007
2008

2009

2010
2011

Thereafter

$12,733
14,567

15,093

14,209
11,460

28,402

$96,464

Total minimum rentals to be received in the future
under noncancelable subleases were $13.3 million at
December 31, 2006.

including operating costs and real
Rental expense,
estate taxes, charged to continuing operations was
$13.7 million, $13.5 million and $12.6 million for
the years ended December 31, 2006, 2005 and 2004,
respectively.

VENTURE CAPITAL COMMITMENTS
As of December 31, 2006, the Company had commit-
ments to invest approximately $5.9 million in limited
partnerships that make private equity investments. The
commitments will be funded, if called, through the end
of the respective investment periods ranging from 2007
to 2011.

OTHER COMMITMENTS
The Company is a member of numerous exchanges and
clearinghouses. Under the membership agreements
with these entities, members generally are required to
guarantee the performance of other members, and if a
member becomes unable to satisfy its obligations to the
clearinghouse, other members would be required to
meet shortfalls. To mitigate these performance risks,
the exchanges and clearinghouses often require mem-
bers to post collateral. The Company’s maximum
potential
liability under these arrangements cannot
be quantified. However, management believes the like-
lihood that the Company would be required to make
remote.
payments under

these arrangements

is

REIMBURSEMENT GUARANTEE
The Company has contracted with a major third-party
financial institution to act as the liquidity provider for
the Company’s tender option bond securitized trusts.
The Company has agreed to reimburse this party for
any losses associated with providing liquidity to the
trusts. The maximum exposure to loss at December 31,
2006 and 2005 was $251.4 million and $270.6 million,
respectively, representing the outstanding amount of all
trust certificates at those dates. This exposure to loss is
mitigated by the underlying bonds in the trusts, which
are either AAA or AA rated. These bonds had a market
value of approximately $263.8 million and $281.8 mil-
lion at December 31, 2006 and 2005, respectively. The
Company believes the likelihood it will be required to
fund the reimbursement agreement obligation under
any provision of the arrangement is remote, and
accordingly, no liability for such guarantee has been
recorded in the accompanying consolidated financial
statements.

CONCENTRATION OF CREDIT RISK
The Company provides investment, capital-raising and
related services to a diverse group of domestic and
foreign customers, including governments, corpora-
tions, and institutional and individual investors. The
Company’s exposure to credit risk associated with the
non-performance of customers in fulfilling their con-
tractual obligations pursuant to securities transactions
can be directly impacted by volatile securities markets,
credit markets and regulatory changes. This exposure is
measured on an individual customer basis and on a
group basis for customers that share similar attributes.
To alleviate the potential for risk concentrations, coun-
terparty credit limits have been implemented for certain
products and are continually monitored in light of
changing customer and market conditions. As of
December 31, 2006 and 2005, the Company did not
have significant concentrations of credit risk with any
one customer or counterparty, or any group of custom-
ers or counterparties.

Note 16 Restructuring

The Company has incurred pre-tax restructuring costs
of $60.7 million for
the twelve months ended
December 31, 2006 in connection with the sale of
the Company’s PCS branch network to UBS. The
expense was incurred upon implementation of a spe-
cific restructuring plan to reorganize the Company’s
support infrastructure as a result of the sale.

The components of this charge are shown below:

(Amounts in thousands)

Severance and employee-related
Lease terminations and asset write-downs

Contract termination costs

Total

$23,063
26,484

11,177

$60,724

48

Piper Jaffray Annual Report 2006

The restructuring charges include the cost of severance,
benefits, outplacement costs and equity award acceler-
ated vesting costs associated with the termination of
employees. The severance amounts were determined
based on a one-time severance benefit enhancement to
the Company’s existing severance pay program in place
at the time of termination notification and will be paid
out over a benefit period of up to one year from the time
of termination. Approximately 275 employees have
received a severance package. In addition, the Company
has incurred restructuring charges for contract termina-
tion costs related to the reduction of office space and the
modification of technology contracts. Contract termi-
nation fees are determined based on the provisions of
Statement of Financial Accounting Standards No. 146,
“Accounting for Costs Associated with Exit or Disposal
Activities,” which among other things requires the rec-
ognition of a liability for contract termination under a
cease-use date concept. The Company also incurred
restructuring charges for the impairment or disposal
of long-lived assets determined in accordance with
SFAS 144. All restructuring costs related to the sale of
the PCS branch network are included within discontin-
ued operations in accordance with SFAS 144.

The Company incurred a pre-tax restructuring-related
expense of $8.6 million in 2005. The expense was
incurred to restructure the Company’s operations as
a means to better align its cost infrastructure with its
revenues. The Company determined restructuring
charges and related accruals based on a specific for-
mulated plan.

The components of this charge are shown below:

(Amounts in thousands)

Severance and employee-related

Lease terminations and asset write-downs

Total

$4,886

3,709

$8,595

Note 17

Shareholders’ Equity

for

provides

The certificate of incorporation of Piper Jaffray Com-
panies
to
the
100,000,000 shares of common stock with a par value
of $0.01 per share and up to 5,000,000 shares of
undesignated preferred stock with a par value of
$0.01 per share.

issuance

up

of

COMMON STOCK
The holders of Piper Jaffray Companies common stock
are entitled to one vote per share on all matters to be
voted upon by the shareholders. Subject to preferences
that may be applicable to any outstanding preferred

Notes to Consolidated Financial Statements

Severance and employee-related charges included the
cost of severance, other benefits and outplacement
costs associated with the termination of employees.
The severance amounts were determined based on
the Company’s severance pay program in place at the
time of termination. Approximately 100 employees
received severance.

Lease terminations and asset write-downs represented
costs associated with redundant office space and equip-
ment disposed of as part of the restructuring plan.
Payments related to terminated lease contracts con-
tinue through the original terms of the leases, which
run for various periods, with the longest lease term
running through 2014.

The following table presents a summary of activity with
respect to the restructuring-related liabilities included
in other liabilities and accrued expense on the state-
ment of financial condition.

(Amounts in thousands)

2005
Restructure

PCS
Restructure

Balance at December 31, 2004

$

–

$

Provision charged to operating

expense

Cash outlays
Noncash write-downs

Balance at December 31, 2005

Provision charged to operating

expense

Cash outlays

Noncash write-downs

8,595

(4,432)
(1,138)

3,025

–

(1,599)

(190)

–

—

–
–

–

60,724

(28,903)

(3,238)

Balance at December 31, 2006

$ 1,236

$ 28,583

stock of Piper Jaffray Companies, the holders of its
common stock are entitled to receive ratably such div-
idends, if any, as may be declared from time to time by
the Piper Jaffray Companies board of directors out of
funds legally available for that purpose. In the event
that Piper Jaffray Companies is liquidated or dissolved,
the holders of its common stock are entitled to share
ratably in all assets remaining after payment of liabil-
ities, subject to any prior distribution rights of Piper
Jaffray Companies preferred stock, if any, then out-
standing. The holders of the common stock have no
preemptive or conversion rights or other subscription

Piper Jaffray Annual Report 2006

49

Notes to Consolidated Financial Statements

rights. There are no redemption or sinking fund pro-
visions applicable to Piper Jaffray Companies common
stock.

Piper Jaffray Companies does not intend to pay cash
dividends on its common stock for the foreseeable future.
Instead, Piper Jaffray Companies intends to retain all
available funds and any future earnings for use in the
operation and expansion of its business and to repurchase
outstanding common stock to the extent authorized by its
board of directors. Additionally, as set forth in Note 21,
there are dividend restrictions on Piper Jaffray.

During the twelve months ended December 31, 2006,
the Company reissued 190,966 common shares out of
treasury in fulfillment of $9.0 million in obligations
under the Piper Jaffray Companies Retirement Plan.
The Company also reissued 76,858 common shares out
of treasury as a result of vesting and exercise transac-
tions under the Long-Term Incentive Plan. In the third
quarter of 2006, the Company entered into an accel-
erated share repurchase (“ASR”) agreement with a
financial institution pursuant to which the Company
repurchased approximately 1.6 million shares of its
common stock. Under the agreement, the Company
prepaid $100 million to the financial institution, which
purchased an equivalent number of shares of the Com-
pany’s common stock on an accelerated basis. The
number of shares repurchased by the Company was
determined based upon the weighted average price of
the Company’s common stock over an agreed upon
period, subject to a specified collar.

Note 18 Earnings Per Share

PREFERRED STOCK
The Piper Jaffray Companies board of directors has the
authority, without action by its shareholders, to desig-
nate and issue preferred stock in one or more series and
to designate the rights, preferences and privileges of
each series, which may be greater than the rights asso-
ciated with the common stock. It is not possible to state
the actual effect of the issuance of any shares of pre-
ferred stock upon the rights of holders of common
stock until the Piper Jaffray Companies board of direc-
tors determines the specific rights of the holders of
preferred stock. However, the effects might include,
among other things, the following: restricting divi-
dends on its common stock, diluting the voting power
of its common stock, impairing the liquidation rights of
its common stock and delaying or preventing a change
in control of Piper Jaffray Companies without further
action by its shareholders.

RIGHTS AGREEMENT
Piper Jaffray Companies has adopted a rights agree-
ment. The issuance of a share of Piper Jaffray Compa-
nies common stock also constitutes the issuance of a
preferred stock purchase right associated with such
share. These rights are intended to have anti-takeover
effects in that the existence of the rights may deter a
potential acquirer from making a takeover proposal or
a tender offer for Piper Jaffray Companies stock.

Basic earnings per common share is computed by divid-
ing net income by the weighted average number of
common shares outstanding for the period. Diluted
earnings per common share is calculated by adjusting

the weighted average outstanding shares to assume
conversion of all potentially dilutive restricted stock
and stock options. The computation of earnings per
share is as follows:

YEAR ENDED DECEMBER 31,
(Amounts in thousands, except per share data)

Net income

Shares for basic and diluted calculations:

Average shares used in basic computation
Stock options

Restricted stock

Average shares used in diluted computation

Earnings per share:

Basic
Diluted

2006

2005

2004

$235,253

$40,083

$50,348

18,002
89

877

18,968

18,813
4

264

19,333
–

66

19,081

19,399

$ 13.07
$ 12.40

$ 2.13
$ 2.10

$ 2.60
$ 2.60

The Company has excluded 0.6 million and 0.3 million
options to purchase shares of common stock from its
calculation of diluted earnings per share for the periods
ended December 31, 2005 and 2004, respectively, as

they represented anti-dilutive stock options. There
were no anti-dilutive effects for the period ended
December 31, 2006.

50

Piper Jaffray Annual Report 2006

Note 19 Employee Benefit Plans

The Company has various employee benefit plans, and
substantially all employees are covered by at least one
plan. The plans include a tax-qualified retirement plan
with 401(k) and profit-sharing components, a non-
qualified retirement plan, a post-retirement benefit
plan, and health and welfare plans. During the years
ended December 31, 2006, 2005 and 2004, the Com-
pany incurred employee benefit expenses from continu-
ing operations of $9.4 million, $10.7 million and
$11.9 million, respectively.

RETIREMENT PLAN
The Piper Jaffray Companies Retirement Plan (“Retire-
ment Plan”) has two components: a defined contribu-
tion retirement savings plan and a tax-qualified, non-
contributory profit-sharing plan. The defined contri-
bution retirement
savings plan allows qualified
employees, at their option, to make contributions
through salary deductions under Section 401(k) of
the Internal Revenue Code. Employee contributions
are 100 percent matched by the Company to a maxi-
mum of 4 percent of recognized compensation up to the
social security taxable wage base. Although the Com-
pany’s matching contribution vests immediately, a par-
ticipant must be employed on December 31 to receive
that year’s matching contribution. The matching con-
tribution can be made in cash or Piper Jaffray Com-
panies common stock, in the Company’s discretion.

The tax-qualified, non-contributory profit-sharing com-
ponent of the Retirement Plan covers substantially all
employees. Company profit-sharing contributions are
discretionary, subject to some limitations to ensure they
qualify as deductions for income tax purposes. Employ-
ees are fully vested after five years of service. There was
no profit sharing contribution made in 2006. The Com-
pany incurred $1.6 million and $3.9 million of continu-
ing operations
related to profit-sharing
contributions in 2005 and 2004, respectively. The profit
sharing component of the retirement plan was termi-
nated effective January 1, 2007.

expense

PENSION AND POST-RETIREMENT MEDICAL PLANS
Certain employees participate in the Piper Jaffray Com-
panies Non-Qualified Retirement Plan, an unfunded,
non-qualified cash balance pension plan. The Com-
pany froze the plan effective January 1, 2004, thereby
eliminating future benefits related to pay increases and
excluding new participants from the plan. In 2004, the
Company recorded a $1.1 million pre-tax curtailment
gain as a result of freezing the plan in accordance with

Notes to Consolidated Financial Statements

Statement of Financial Accounting Standard No. 88,
“Employers’ Accounting for Settlements and Curtail-
ments of Defined Benefit Pension Plans and for Ter-
mination Benefits” (“SFAS 88”).

Effective for the year ended December 31, 2006, the
Company adopted the recognition and disclosure provi-
sions of SFAS 158. The adoption of SFAS 158 had no
impact on the Company’s pension benefit liabilities and
an immaterial impact on the Company’s post-retirement
medical benefit liabilities.

SFAS 158 required the Company to recognize the
funded status of its pension and post-retirement med-
ical plans in the consolidated statement of financial
condition as of December 31, 2006, with a correspond-
ing adjustment to accumulated other comprehensive
income, net of tax. Any adjustment to accumulated
other comprehensive income at adoption represents the
net unrecognized actuarial losses and unrecognized
prior service costs which were previously netted against
each plan’s funded status. Actuarial gains and losses
that arise in subsequent periods and are not recognized
as net periodic benefit cost in the same periods will be
recognized as a component of other comprehensive
income. Those amounts will be subsequently recog-
nized as a component of net periodic benefit cost on the
same basis as the amounts recognized in accumulated
other comprehensive income in accordance with
SFAS 158.

In 2006 and 2005, the Company paid out amounts
under the pension plan that exceeded its service and
triggered settlement
interest cost. These payouts
accounting under SFAS 88, which resulted in recogni-
tion of pre-tax settlement losses of $2.1 and $1.2 mil-
lion in 2006 and 2005, respectively.

All employees of the Company who meet defined age and
service requirements are eligible to receive post-retirement
health care benefits provided under a post-retirement
benefit plan established by the Company in 2004. The
estimated cost of these retiree health care benefits is
accrued during the employees’ active service. In connec-
tion with the sale of the Company’s PCS branch network,
the Company recognized a $1.9 million curtailment gain
within discontinued operations related to the reduction of
post-retirement health plan participants.

Piper Jaffray Annual Report 2006

51

Notes to Consolidated Financial Statements

The Company uses a September 30 measurement date
for the pension and post-retirement benefit plans.
Financial information on changes in benefit obligation,

fair value of plan assets and the funded status of the
pension and post-retirement benefit plans as of Decem-
ber 31, 2006 and 2005, is as follows:

(Amounts in thousands)

Change in benefit obligation:

Pension Benefits

Post-retirement
Medical Benefits

2006

2005

2006

2005

Benefit obligation, at October 1 of prior year

$ 27,550

$ 29,389

$ 2,012

$ 1,687

Service cost
Interest cost

Plan participants’ contributions

Net actuarial loss (gain)
Curtailment gain

Settlement gain

Benefits paid

Benefit obligation at September 30

Change in plan assets:

Fair value of plan assets at October 1 of prior year
Actual return on plan assets

Employer contributions

Plan participants’ contributions
Benefits paid

Fair value of plan assets at September 30

Funded status at September 30

Employer fourth quarter contributions

Benefits paid in fourth quarter

–
1,383

–

(172)
–

(2,170)

(14,774)

–
1,643

–

1,577
–

–

(5,059)

295
102

64

(155)
(1,750)

–

(137)

306
99

–

(80)
–

–

–

$ 11,817

$ 27,550

$ 431

$ 2,012

$

$

–
–

$

–
–

14,774

–
(14,774)

5,059

–
(5,059)

$

–
–

74

63
(137)

$

–

$

–

$

–

$

–
–

–

–
–

–

$(11,817)

$(27,550)

$ (431)

$(2,012)

(226)

809

(529)

1,746

(27)

54

–

–

Amounts recognized in the consolidated statements of financial condition

$(11,234)

$(26,333)

$ (404)

$(2,012)

Components of accumulated other comprehensive income/(loss), net of tax:

Net actuarial loss

Prior service credits

Total at December 31

The components of the net periodic benefits costs for
the years ended December 31, 2006, 2005 and 2004,
are as follows:

(Amounts in thousands)

Service cost

Interest cost

Expected return on plan assets

Amortization of prior service credit
Amortization of net loss

Net periodic benefit cost
SFAS 88 event loss/(gain)

Total expense/(benefit) for the year

$

$

980

–

980

$ 3,941

$

–

41

(58)

$ N/A

N/A

$ 3,941

$

(17)

$ N/A

Pension Benefits

Post-retirement
Medical Benefits

2006

2005

2004

2006

2005

2004

$

–

1,383

–

–
376

$1,759
2,086

$3,845

$

–

$

–

$ 295

$306

$185

1,643

1,363

–

–
395

–

(158)
145

102

–

(58)
2

99

–

(64)
13

66

–

(48)
22

$2,038
1,168

$ 1,350
(1,124)

$ 341
(1,947)

$354
–

$225
–

$3,206

$

226

$(1,606)

$354

$225

Amortization expense of net actuarial losses expected
to be recognized during 2007 is $42,000 and $2,000 for
the pension plan and post-retirement medical plan,

respectively. In addition, the post-retirement medical
plan expects to recognize a credit of $20,000 in 2007
for the amortization of prior service credits.

52

Piper Jaffray Annual Report 2006

The assumptions used in the measurement of the Com-
pany’s benefit obligations are as follows:

Discount rate used to determine year-end obligation
Discount rate used to determine fiscal year expense

Expected long-term rate of return on participant balances

Rate of compensation increase

Health care cost trend rate assumed for next year

(pre-medicare/post-medicare)

Rate to which the cost trend rate is assumed to decline

(the ultimate trend rate) (pre-medicare/post-medicare)

Year that the rate reaches the ultimate trend rate

(pre-medicare/post-medicare)

A one-percentage-point change in the assumed health
care cost trend rates would not have a material effect on
the Company’s post-retirement benefit obligations or
net periodic post-retirement benefit cost. The pension
plan and post-retirement medical plan do not have
assets and are not funded. Pension and post-retirement

Notes to Consolidated Financial Statements

Pension Benefits

2006

2005

6.25%
5.87%

6.50%

N/A

5.85%
6.00%

6.50%

N/A

2006

Post-retirement
Benefits

2006

6.25%
5.87%

N/A

N/A

2005

5.85%
6.00%

N/A

N/A

2005

8%/10%

9%/11%

5.0%/5.0%

5.0%/5.0%

2012/2013

2012/2013

benefit payments, which reflect expected future service,
are expected to be paid as follows:

(Amounts in thousands)

2007

2008

2009
2010

2011

2012 to 2016

Pension
Benefits

$1,007

907

874
852

834

4,266

$8,740

Post-Retirement
Benefits

$ 38

36

38
42

50

450

$654

HEALTH AND WELFARE PLANS
Company employees who meet certain work schedule
and service requirements are eligible to participate in
the Company’s health and welfare plans. The Company

subsidizes the cost of coverage for employees. The
medical plan contains cost-sharing features such as
deductibles and coinsurance.

Note 20 Stock-Based Compensation and Cash Award Program

The Company maintains one stock-based compensa-
tion plan, the Piper Jaffray Companies Amended and
Restated 2003 Annual and Long-Term Incentive Plan
(“Long-Term Incentive Plan”). The plan permits the
grant of equity awards, including non-qualified stock
options and restricted stock, to the Company’s employ-
ees and directors for up to 4.5 million shares of com-
mon stock. In 2004, 2005 and 2006, the Company
granted shares of restricted stock and options to pur-
chase Piper Jaffray Companies common stock to
employees and granted options to purchase Piper Jaf-
fray Companies common stock to its non-employee
directors. The Company believes that such awards help
align the interests of employees and directors with
those of shareholders and serve as an employee

retention tool. The awards granted to employees have
three-year cliff vesting periods. The director awards
were fully vested upon grant. The maximum term of the
stock options granted to employees and directors is ten
years. The plan provides for accelerated vesting of
option and restricted stock awards if there is a change
in control of the Company (as defined in the plan), in
the event of a participant’s death, and at the discretion
of the compensation committee of the Company’s
board of directors.

Prior to January 1, 2006, the Company accounted for
stock-based compensation under the fair value method
of accounting as prescribed by SFAS 123, as amended
by SFAS 148. As such, the Company recorded stock-
based compensation expense in the consolidated

Piper Jaffray Annual Report 2006

53

Notes to Consolidated Financial Statements

statement of operations at fair value, net of estimated
forfeitures.

Effective January 1, 2006, the Company adopted the
provisions of SFAS 123(R) using the modified prospec-
tive transition method. SFAS 123(R) requires all share-
including grants of
based payments to employees,
employee stock options,
to be recognized in the
statement of operations based on fair value, net of
estimated forfeitures. Because the Company histori-
cally expensed all equity awards based on the fair value
method, net of estimated forfeitures, SFAS 123(R) did
not have a material effect on the Company’s measure-
stock-based
ment or
compensation.

recognition methods

for

Employee and director stock options granted prior to
January 1, 2006, were expensed by the Company on a
straight-line basis over the option vesting period, based
on the estimated fair value of the award on the date of
grant using a Black-Scholes option-pricing model.
Employee and director stock options granted after
January 1, 2006, are expensed by the Company on a
straight-line basis over the required service period,
based on the estimated fair value of the award on
the date of grant using a Black-Scholes option-pricing
model. At the time it adopted SFAS 123(R), the Com-
pany changed the expensing period from the vesting
period to the required service period, which shortened
the period over which options are expensed for employ-
ees who are retiree-eligible on the date of grant or
become retiree-eligible during the vesting period. The
number of employees that fell within this category at
January 1, 2006 was not material. In accordance with
SEC guidelines, the Company did not alter the expense
recorded in connection with prior option grants for the
change in the expensing period.

Employee restricted stock grants prior to January 1,
2006, are amortized on a straight-line basis over the
vesting period based on the market price of Piper
Jaffray Companies common stock on the date of grant.
Restricted stock grants after January 1, 2006, are val-
ued at the market price of the Company’s common
stock on the date of grant and amortized on a straight-
line basis over the required service period. The majority
of the Company’s restricted stock grants provide for
continued vesting after termination, so long as the
employee does not violate certain post-termination
restrictions, as set forth in the award agreements.
The Company considers the required service period
to be the greater of the vesting period or the post-
termination restricted period. The Company believes
that
the
the post-termination restrictions meet
SFAS 123(R) definition of a substantive service
requirement.

54

Piper Jaffray Annual Report 2006

The Company recorded compensation expense, net of
estimated forfeitures, within continuing operations of
$20.8 million, $13.8 million and $6.6 million for the
years ended December 31, 2006, 2005 and 2004,
respectively, related to employee stock option and
restricted stock grants and $0.3 million in outside ser-
vices expense related to director stock option grants for
each of the years 2006, 2005, and 2004. The tax benefit
related to the total compensation cost for stock-based
compensation arrangements
totaled $8.1 million,
$5.4 million, and $2.6 million for the years ended
December 31, 2006, 2005 and 2004, respectively.

In connection with the sale of the Company’s PCS
branch network, the Company undertook a plan to
significantly restructure the Company’s support infra-
structure. The Company accelerated the equity award
vesting for employees terminated as part of this restruc-
turing. The acceleration of equity awards was deemed
to be a modification of the awards as defined by
SFAS 123(R). For the year ended December 31,
2006, the Company recorded $2.7 million of expense
in discontinued operations related to the modification
of equity awards to accelerate service vesting. Unvested
equity awards related to employees transferring to UBS
as part of the PCS sale were canceled. See Notes 4 and
16 for further discussion of the Company’s discontin-
ued operations and restructuring activities.

The fair value of each stock option is estimated on the
date of grant using the Black-Scholes option-pricing
model using assumptions such as the risk-free interest
rate, the dividend yield, the expected volatility and the
expected life of the option. The risk-free interest rate
assumption is based on the U.S. treasury bill rate with a
maturity equal to the expected life of the option. The
dividend yield assumption is based on the assumed
dividend payout over the expected life of the option.
The expected volatility assumption is based on industry
comparisons. The Company has only been a publicly
traded company for approximately 36 months; there-
fore, it does not have sufficient historical data to deter-
mine an appropriate expected volatility. The expected
life assumption is based on an average of the following
two factors: 1) industry comparisons; and 2) the guid-
ance provided by the SEC in Staff Accounting Bulle-
tin No. 107, (“SAB 107”). SAB 107 allows the use of an
“acceptable” methodology under which the Company
can take the midpoint of the vesting date and the full
contractual term. The following table provides a sum-
mary of the valuation assumptions used by the Com-
pany to determine the estimated value of stock option
grants in Piper Jaffray Companies common stock for
the twelve months ended December 31:

Weighted average assumptions in
option valuation

Risk-free interest rates

Dividend yield
Stock volatility factor

Expected life of options (in years)

Weighted average fair value of options granted

Notes to Consolidated Financial Statements

2006

2005

2004

4.64%(1)
0.00%(1)
39.35%(1)
5.53(1)
$22.92(1)

3.77% 3.20%

0.00% 0.00%
38.03% 40.00%

5.83

$16.58

5.79

$21.24

(1) 2006 weighted average assumptions exclude the assumptions utilized in equity award modifications related to the sale of the Company’s PCS branch network to aid comparability with

the prior years.

The following table summarizes the Company’s stock options outstanding for the years ended December 31, 2006,
2005 and 2004:

Options
Outstanding

Weighted
Average
Exercise Price

Weighted Average
Remaining
Contractual
Term (Years)

Aggregate
Intrinsic
Value

December 31, 2003

Granted

Exercised
Canceled

December 31, 2004

Granted
Exercised

Canceled

December 31, 2005

Granted

Exercised
Canceled

December 31, 2006

Options exercisable at December 31, 2004
Options exercisable at December 31, 2005

Options exercisable at December 31, 2006

Additional information regarding Piper Jaffray Com-
panies stock options outstanding as of December 31,
2006 is as follows:

Range of Exercise Prices

$28.01
$33.40

$39.62

$47.30 - $51.05
$70.65

–

322,005

–
(25,975)

296,030

426,352
–

(79,350)

643,032

50,560

(31,562)
(151,849)

510,181

21,249
54,041

59,623

–

$47.49

–
47.30

$47.50

38.78
–

42.91

$42.29

53.16

41.64
42.82

$43.25

$50.13
$37.18

$44.16

9.1

$

133,214

8.7

$

–

7.8

9.9
8.9

7.9

$11,172,964

$ (206,753)
174,012
$

$ 1,251,487

Options Outstanding

Exercisable Options

Weighted
Average
Remaining
Contractual
Term (Years)

8.3
8.6

8.1

7.3
9.3

Weighted
Average
Exercise
Price

$28.01
$33.40

$39.62

$47.59
$70.65

Weighted
Average
Exercise
Price

$28.01
$33.40

$39.62

$49.82
$70.65

Shares

22,852
4,001

1,793

19,205
11,772

Shares

22,852
4,001

248,636

222,920
11,772

As of December 31, 2006, there was $2.0 million of
total unrecognized compensation cost related to stock
options expected to be recognized over a weighted
average period of 1.28 years.

Cash received from option exercises for the year ended
December 31, 2006 was $1.3 million. The tax benefit
realized for the tax deduction from option exercises
totaled $0.3 million for the year ended December 31,
2006.

Piper Jaffray Annual Report 2006

55

Notes to Consolidated Financial Statements

The following table summarizes the Company’s non-
vested restricted stock for the years ended December 31,
2006, 2005 and 2004:

December 31, 2003

Granted

Vested
Canceled

December 31, 2004

Granted
Vested

Canceled

December 31, 2005

Granted

Vested

Canceled

December 31, 2006

Nonvested
Restricted
Stock

Weighted
Average
Grant Date
Fair Value

–

$

–

550,659

–
(18,774)

531,885

993,919
(482)

(107,878)

48.68

–
48.80

$48.68

37.77
48.75

44.23

1,417,444

$41.37

847,669

(68,940)

(639,372)

48.35

45.03

44.28

1,556,801

$43.81

As of December 31, 2006, there was $29.3 million of
total unrecognized compensation cost
related to
restricted stock expected to be recognized over a
weighted average period of 1.88 years.

The Company has a policy of issuing shares out of
treasury (to the extent available) to satisfy share option
exercises and restricted stock vesting. The Company
expects to withhold approximately 0.1 million shares
from employee equity awards vesting in 2007, related
to the payment of individual income tax on restricted
stock vesting. For accounting purposes, withholding
shares to cover employees’ tax obligations is deemed to
be a repurchase of shares by the Company.

In connection with the Company’s spin-off
from
U.S. Bancorp on December 31, 2003, the Company
established a cash award program pursuant to which it
granted cash awards to a broad-based group of employ-
ees to aid in retention of employees and to compensate
employees for the value of U.S. Bancorp stock options
and restricted stock lost by employees. The cash awards
are being expensed over a four-year period ending
December 31, 2007. Participants must be employed
on the date of payment to receive payment under the
award. Expense related to the cash award program is
included as a separate line item on the Company’s
consolidated statements of operations.

Note 21 Net Capital Requirements and Other Regulatory Matters

As a registered broker dealer and member firm of the
NYSE, Piper Jaffray is subject to the uniform net capital
rule of the SEC and the net capital rule of the NYSE.
Piper Jaffray has elected to use the alternative method
permitted by the SEC rule, which requires that it main-
tain minimum net capital of the greater of $1.0 million
or 2 percent of aggregate debit balances arising from
customer transactions, as such term is defined in the
SEC rule. Under the NYSE rule, the NYSE may prohibit
a member firm from expanding its business or paying
dividends if resulting net capital would be less than
5 percent of aggregate debit balances. Advances to
affiliates, repayment of subordinated debt, dividend
payments and other equity withdrawals by Piper Jaf-
fray are subject to certain notification and other

provisions of the SEC and NYSE rules. In addition,
Piper Jaffray is subject to certain notification require-
ments related to withdrawals of excess net capital.

At December 31, 2006, net capital calculated under the
SEC rule was $367.1 million, or 395.3 percent of
aggregate debit balances; this amount exceeded the
minimum net capital required under the SEC rule by
$365.3 million.

Piper Jaffray Ltd., which is a registered United King-
dom broker dealer, is subject to the capital require-
ments of the Financial Services Authority (“FSA”). As
of December 31, 2006, Piper Jaffray Ltd. was in com-
pliance with the capital requirements of the FSA.

56

Piper Jaffray Annual Report 2006

Notes to Consolidated Financial Statements

Note 22

Income Taxes

Income tax expense is provided using the asset and
liability method. Deferred tax assets and liabilities are
recognized for the expected future tax consequences
attributable to temporary differences between amounts

reported for income tax purposes and financial state-
ment purposes, using current tax rates.

The components of income tax expense from continu-
ing operations are as follows:

YEAR ENDED DECEMBER 31,

(Amounts in thousands)

Current:

Federal

State

Foreign

Deferred:
Federal

State

Foreign

Total income tax expense

A reconciliation of the statutory federal income tax
rates to the Company’s effective tax rates for the fiscal
years ended December 31, is as follows:

(Amounts in Thousands)

Federal income tax at statutory rates

Increase (reduction) in taxes resulting from:

State income taxes, net of federal tax benefit
Net tax-exempt interest income

Other, net

Total income tax expense

Income taxes from discontinued operations were
$160.7 million, $10.2 million and $12.5 million for
the years ended December 31, 2006, 2005 and 2004,
respectively.

for

In accordance with Accounting Principles Bulletin 23,
“Accounting
Income Taxes-Special Areas,”
U.S. income taxes are not provided on undistributed
earnings of international subsidiaries that are perma-
nently reinvested. As of December 31, 2006, undistrib-
uted earnings permanently reinvested in the Company’s
foreign subsidiary were approximately $2.1 million. At
current tax rates, additional federal income taxes (net
of available tax credits) of $.1 million would become
payable if such income were to be repatriated.

Deferred income tax assets and liabilities reflect the tax
effect of temporary differences between the carrying
amount of assets and liabilities for financial reporting
purposes and the amounts used for the same items for
income tax reporting purposes. The net deferred tax
asset included in other assets on the consolidated

2006

2005

2004

$25,270

4,560

615

30,445

$10,904

$ 4,577

324

116

1,724

489

11,344

6,790

3,571

578

380

4,529

(2,103)

1,595

27

8,222

1,715

–

(481)

9,937

$34,974

$10,863

$16,727

2006

2005

2004

$34,256

$12,611

$17,164

3,340
(3,947)

1,325

1,247
(3,426)

431

2,235
(3,677)

1,005

$34,974

$10,863

$16,727

statements of financial condition consisted of the fol-
lowing items at December 31:

(Amounts in thousands)

Deferred tax assets:

Liabilities/accruals not currently

deductible

Pension and retirement costs
Deferred compensation
Other

Deferred tax liabilities:
Firm investments
Fixed assets
Other

2006

2005

$17,351
5,201
22,574
3,335

$19,205
10,962
15,108
4,406

48,461

49,681

1,228
4,672
498

6,398

440
2,379
270

3,089

Net deferred tax asset

$42,063

$46,592

The Company has reviewed the components of the
deferred tax assets and has determined that no valua-
tion allowance is deemed necessary based on manage-
ment’s expectation of future taxable income.

Piper Jaffray Annual Report 2006

57

Piper Jaffray Companies

SUPPLEMENTAL INFORMATION

Quarterly Information (Unaudited)

2006 FISCAL QUARTER

(Amounts in thousands, except per share data)

Total revenues

Interest expense

Net revenues
Non-interest expenses

Income from continuing operations before income tax expense

Net income from continuing operations
Income/(loss) from discontinued operations, net of tax

Net income

Earnings per basic common share

Income from continuing operations

Income/(loss) from discontinued operations

Earnings per basic common share

Earnings per diluted common share

Income from continuing operations

Income/(loss) from discontinued operations

Earnings per diluted common share

Weighted average number of common shares

Basic
Diluted

2005 FISCAL QUARTER

(Amounts in thousands, except per share data)

Total revenues
Interest expense

Net revenues

Non-interest expenses
Income/(loss) from continuing operations before income tax expense/(benefit)

Net income/(loss) from continuing operations

Income from discontinued operations, net of tax
Net income

Earnings per basic common share

Income/(loss) from continuing operations
Income from discontinued operations

Earnings per basic common share

Earnings per diluted common share

Income/(loss) from continuing operations

Income from discontinued operations

Earnings per diluted common share
Weighted average number of common shares

Basic

Diluted

First

Second

Third

Fourth

$143,112

$114,393

$124,597

$153,135

8,153

134,959
106,274

28,685

18,706
5,151

9,143

105,250
93,091

12,159

7,929
(3,792)

$ 23,857

$ 4,137

8,490

116,107
101,058

15,049

9,528
177,085(1)
$186,613

6,517

146,618
104,638(2)
41,980
26,736(2)
(6,090)

$ 20,646

$

$

$

$

1.01

0.28

1.29

0.98

0.27

1.25

$

$

$

$

0.43

$

(0.20)

0.53
9.82(1)

0.22

$ 10.35

0.40

(0.19)

0.21

$

$

0.50
9.29(1)

9.79

$

$

$

$

1.58(2)
(0.36)

1.22

1.49(2)
(0.34)

1.15

18,462
19,146

18,556
19,669

18,031
19,071

16,973
18,004

First

Second

Third

Fourth

$95,696
7,359

$102,141
7,909

$128,189
8,064

$127,776
9,162

88,337

83,201
5,136

3,403

3,932
$ 7,335

$ 0.18
0.20

$ 0.38

$ 0.17

0.20

$ 0.38

94,232
96,090(3)
(1,858)
(1,108)(3)
2,345
$ 1,237

120,125

104,316
15,809

10,938

118,614

101,670
16,944

11,935

4,210
$ 15,148

4,428
$ 16,363

$

$

$

$

(0.06)(3) $
0.12

0.58
0.22

0.07

$

0.80

(0.06)(3) $
0.12

0.57

0.22

0.06

$

0.79

$

$

$

$

0.65
0.24

0.89

0.63

0.23

0.87

19,378

19,523

19,028

19,195

18,841

19,107

18,365

18,850

(1) The third quarter of 2006 included the gain on the sale of the Company’s PCS branch network.

(2) The fourth quarter of 2006 included an after tax reduction of litigation reserves of $13,100 or $0.73 per diluted share.

(3) The second quarter of 2005 included a pre-tax restructuring charge of $8,595 or $0.29 per diluted share after tax.

58

Piper Jaffray Annual Report 2006

Market for Piper Jaffray Companies Common Stock and Related Shareholder Matters

Piper Jaffray Companies

SHAREHOLDERS
We had 20,660 shareholders of record and an estimated
98,590 beneficial owners of our common stock as of
February 23, 2007.

DIVIDENDS
We do not intend to pay cash dividends on our common
stock for the foreseeable future. Our board of directors
is free to change our dividend policy at any time.
Restrictions on our broker dealer subsidiary’s ability
to pay dividends are described in Note 21 to the con-
solidated financial statements.

STOCK PRICE INFORMATION
Our common stock is listed on the New York Stock
Exchange under the symbol “PJC.” The following table
contains historical quarterly price information for the
years ended December 31, 2006 and 2005. On Febru-
ary 23, 2007, the last reported sale price of our com-
mon stock was $68.77.

2006 FISCAL YEAR

First Quarter

Second Quarter

Third Quarter
Fourth Quarter

2005 FISCAL YEAR

First Quarter

Second Quarter

Third Quarter
Fourth Quarter

High

Low

$55.40

$38.74

74.65

66.80
71.61

53.18

46.60
58.80

High

Low

$47.18

$36.59

37.67

35.00
41.12

26.40

29.00
28.56

Piper Jaffray Annual Report 2006

59

Piper Jaffray Companies

Stock Performance Graph

The following graph compares the performance of an investment in our common stock from January 2, 2004, the
date our common stock began regular-way trading on the New York Stock Exchange following our spin-off from
U.S. Bancorp, with the S&P 500 Index and the S&P 500 Diversified Financials Index. The graph assumes $100
was invested on January 2, 2004, in each of our common stock, the S&P 500 Index and the S&P 500 Diversified
Financials Index and that all dividends were reinvested on the date of payment without payment of any
commissions. Dollar amounts in the graph are rounded to the nearest whole dollar. Based on these assumptions,
the cumulative total return for 2006 would have been $151.51 for our common stock, $135.12 for the S&P 500
Index and $147.74 for the S&P 500 Diversified Financials Index. For 2005, the cumulative total return would
have been $93.95 for our common stock, $116.69 for the S&P 500 Index and $119.24 for the S&P 500 Diversified
Financials Index. For 2004, the cumulative total return would have been $111.51 for our common stock, $111.23
for the S&P 500 Index and $108.59 for the S&P 500 Diversified Financials Index. The performance shown in the
graph represents past performance and should not be considered an indication of future performance.

CUMULATIVE TOTAL RETURN PIPER JAFFRAY COMMON STOCK, THE S & P 500 INDEX AND
THE S & P 500 DIVERSIFIED FINANCIALS INDEX

$130

$120

$110

$100

$90

$80

$70

$60

1/02/04

3/31/04

6/30/04

9/30/04

12/31/04

3/31/05

6/30/05

9/30/05

12/31/05

3/31/06

6/30/06

9/30/06

12/31/06

PJC

S&P 500  

S&P 500 Diversified Financials

60

Piper Jaffray Annual Report 2006

Corporate Headquarters
Piper Jaffray Companies
Mail Stop J09N05
800 Nicollet Mall, Suite 800
Minneapolis, MN 55402
612 303-6000

Company Web Site
www.piperjaffray.com

Stock Transfer Agent and Registrar
Mellon Investor Services LLC acts as transfer
agent and registrar for Piper Jaffray Companies
and maintains all shareholder records for 
the company. For questions regarding owned
Piper Jaffray Companies stock, stock transfers,
address corrections or changes, lost stock
certificates or duplicate mailings, please contact
Mellon Investor Services by writing or calling: 

Mellon Investor Services LLC
P.O. Box 3315
South Hackensack, NJ 07606
800 872-4409

Street Address for Overnight Deliveries:
480 Washington Blvd.
Jersey City, NJ 07310-1900 

Web Site Access to Registrar
Shareholders may access their investor
statements online 24 hours a day, seven days 
a week with MLinkSM; for more information, 
go to www.melloninvestor.com/ISD.

E-mail Delivery of Shareholder Materials
Piper Jaffray invites its shareholders to join in 
its commitment to being an environmentally
responsible corporation by receiving future
shareholder materials electronically. 

Registered shareholders may sign up for
electronic delivery of future proxy statements,
proxy cards and annual reports by accessing the
Web site, www.proxyvote.com, and following the
instructions to vote. After you have voted your
proxy, you will be prompted regarding electronic
delivery. Electronic delivery will help Piper Jaffray
reduce paper waste and minimize printing and
postage costs. 

This book was printed on recycled paper that
contains post-consumer waste.

Independent Accountants
Ernst & Young LLP

Common Stock Listing
New York Stock Exchange (symbol: PJC)

Investor Inquiries
Shareholders, securities analysts and 
investors seeking more information about 
the company should contact Jennifer A. Olson-
Goude, director of Investor Relations, at
jennifer.a.olson-goude@pjc.com, 612 303-6277, 
or the corporate headquarters address.

Web Site Access to SEC Reports and Corporate
Governance Information
Piper Jaffray Companies makes available free 
of charge on its Web site, www.piperjaffray.com,
its annual reports on Form 10-K, quarterly reports
on Form 10-Q, current reports on Form 8-K, 
and amendments to those reports filed or
furnished pursuant to Section 13(a) or 15(d) of 
the Exchange Act, as well as all other reports filed
by Piper Jaffray Companies with the SEC, as soon
as reasonably practicable after it electronically
files them with, or furnishes them to, the SEC. 
Piper Jaffray Companies also makes available 
free of charge on its Web site the company’s
codes of ethics and business conduct, its
corporate governance principles and the charters
of the audit, compensation, and nominating and
governance committees of the board of directors.
Printed copies of these materials will be mailed
upon request. 

Dividends
Piper Jaffray Companies does not currently 
pay cash dividends on its common stock.

Certifications
The certifications by the chief executive officer 
and chief financial officer of Piper Jaffray
Companies required under Section 302 of the
Sarbanes-Oxley Act of 2002 have been filed as
exhibits to its 2006 Annual Report on Form 10-K.
The certification by the chief executive officer of
Piper Jaffray Companies required under Section
303A.12(a) of the corporate governance rules of
the New York Stock Exchange has been submitted
to the New York Stock Exchange.