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Assembly Biosciences, Inc.

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FY2021 Annual Report · Assembly Biosciences, Inc.
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331 Oyster Point Boulevard4th FloorSouth San Francisco, CA 94080assemblybio.com2021 Annual ReportOur Scientific Approach It takes deep experience, agility and unbiased scientific thinking to translate research and discovery into a finite and curative therapy. It’s imperative that we approach our science without preconceived notions of what will and won’t work and instead approach it creatively and open mindedly. This past year we continued to expand our leadership and scientific teams to reflect the broad thinking and creativity needed to achieve the ambitious goals we’ve set for ourselves as a company. We’ve benefited from the additions of renowned international industry experts to our board of directors, including Nobel laureate Sir Michael Houghton, PhD, who brings more than 40 years of scientific and drug experience, as well as Lisa Johnson-Pratt, MD, a distinguished physician with more than 20 years of experience overseeing business development efforts for the entire drug development lifecycle. We’ve also bolstered our leadership team from within through the promotions of Jason Okazaki, our Chief Operating Officer; Michael Samar, our Chief Financial Officer; and Nicole White, PhD, our Chief Manufacturing Officer. We possess deep knowledge in molecular biology and chemistry, and that knowledge continues to drive our progress. I see so many contributions already taking shape among our leadership and broader scientific teams. I’m confident that our science, mission and people will create value for our stockholders as we reach important milestones throughout 2022. Scientific Advances, Collaborations and Pipeline Progress  In October, we reinforced our commitment to evaluating the backbone of our core inhibitors + nucleos(t)ide reverse transcriptase inhibitors (NrtI) in DEAR FELLOW STOCKHOLDERS,2021 served as an important reminder of what it means to be a pioneer in virology. As the pandemic continues to impact our daily lives in unexpected ways, science continuously empowers us to innovate and move forward. I’m proud to report that at Assembly Bio, we’ve made great strides in advancing our science and leveraging our team’s strengths to achieve important milestones, sharpen our strategic focus and move closer to fulfilling our mission to relieve millions of people from the burden of chronic hepatitis B virus (HBV) infection.Passionate about making a  profound impact on patients’ livesAssembly Bio is passionately applying scientific ingenuity and a deep knowledge of virology to find a cure for hepatitis B infection, one of the world’s most prevalent and devastating infectious diseases, and to discover novel antivirals to treat serious viral diseases. We’ve made great strides advancing our science and leveraging our team’s strengths to achieve important milestones, sharpen our strategic focus and move closer to fulfilling our missionOur Scientific Approach It takes deep experience, agility and unbiased scientific thinking to translate research and discovery into a finite and curative therapy. It’s imperative that we approach our science without preconceived notions of what will and won’t work and instead approach it creatively and open mindedly. This past year we continued to expand our leadership and scientific teams to reflect the broad thinking and creativity needed to achieve the ambitious goals we’ve set for ourselves as a company. We’ve benefited from the additions of renowned international industry experts to our board of directors, including Nobel laureate Sir Michael Houghton, PhD, who brings more than 40 years of scientific and drug experience, as well as Lisa Johnson-Pratt, MD, a distinguished physician with more than 20 years of experience overseeing business development efforts for the entire drug development lifecycle. We’ve also bolstered our leadership team from within through the promotions of Jason Okazaki, our Chief Operating Officer; Michael Samar, our Chief Financial Officer; and Nicole White, PhD, our Chief Manufacturing Officer. We possess deep knowledge in molecular biology and chemistry, and that knowledge continues to drive our progress. I see so many contributions already taking shape among our leadership and broader scientific teams. I’m confident that our science, mission and people will create value for our stockholders as we reach important milestones throughout 2022. Scientific Advances, Collaborations and Pipeline Progress  In October, we reinforced our commitment to evaluating the backbone of our core inhibitors + nucleos(t)ide reverse transcriptase inhibitors (NrtI) in DEAR FELLOW STOCKHOLDERS,2021 served as an important reminder of what it means to be a pioneer in virology. As the pandemic continues to impact our daily lives in unexpected ways, science continuously empowers us to innovate and move forward. I’m proud to report that at Assembly Bio, we’ve made great strides in advancing our science and leveraging our team’s strengths to achieve important milestones, sharpen our strategic focus and move closer to fulfilling our mission to relieve millions of people from the burden of chronic hepatitis B virus (HBV) infection.Passionate about making a  profound impact on patients’ livesAssembly Bio is passionately applying scientific ingenuity and a deep knowledge of virology to find a cure for hepatitis B infection, one of the world’s most prevalent and devastating infectious diseases, and to discover novel antivirals to treat serious viral diseases. We’ve made great strides advancing our science and leveraging our team’s strengths to achieve important milestones, sharpen our strategic focus and move closer to fulfilling our mission2022 Key Objectives and 
Anticipated Progress 

     1H 2022

•  Introduce HBV/HDV entry 

inhibitor program 

•  Reveal novel undisclosed HBV 

Target 2

•  Introduce R&D initiatives aimed 
at other viruses (non-HBV) - mid-
year

•  Both Phase 2 Triple Combo 
Studies (IFN and RNAi) fully 
enrolled 

•  Initiate Phase 2 Triple Combo 

Study – ASPIN

•  Initiate Phase 1b Study – 3733

2H 2022

•  Interim Phase 2 On-Treatment 

Data     

Triple Combo Study - IFN

•  Interim Phase 2 On-Treatment 

Data Triple Combo Study – RNAi

•  Initiate Phase 1a Study – 4334

•  Interim Phase 1b Data - 3733

combination with other mechanisms to 
treat HBV when we announced our clinical 
collaboration with Antios Therapeutics. The 
collaborative study with Antios will evaluate 
a triple combination treatment of ATI-2173, 
Antios’ investigational proprietary active site 
polymerase inhibitor nucleotide (ASPIN), 
along with our lead core inhibitor candidate, 
vebicorvir (VBR), and tenofovir disoproxil 
fumarate, an NrtI in patients with HBV. 

Our two ongoing Phase 2 triple combination 
studies of our lead investigational core 
inhibitor candidate, vebicorvir (VBR), plus 
Nrtl therapy, the first with AB-729 Arbutus 
Biopharma’s investigational RNAi candidate, 
and the second with interferon, have both 
completed enrollment, and we anticipate 
initial on-treatment data during the second 
half of this year. 

Other important goals we accomplished in 
2021 include: 

•  Nominating our fourth core inhibitor 

candidate, ABI-4334 (4334), which has 
been optimized for potency, to advance 
into clinical development with the aim of 
initiating clinical studies in 2022

•  Presenting two posters and an oral 

presentation at AASLD The Liver Meeting™ 
focusing on:  

-  preclinical characterization, including 

single-digit nanomolar potency for 4334 
against both pgRNA encapsidation and 
cccDNA formation

-  favorable pharmacokinetics and safety 
results in our Phase 1a study of our next-
generation core inhibitor ABI-H3733 
(3733)

-  positive Phase 2 open-label study data 

for VBR demonstrating the contribution 
of core inhibition to deepen viral 
suppression

•  Reporting the enhanced potency and target 
coverage of both 3733 and our discontinued 
core inhibitor, ABI-H2158 (2158), as compared 
to VBR for both antiviral inhibition and 

cccDNA formation at EASL’s International 

in the U.S. healthcare landscape about this 

Liver Congress™

•  Reported Phase 1a safety and 

pharmacokinetics data for 3733

In 2021, we also learned f rom our work 

and clinical study results and adapted 

our strategy and pipeline advancement 

plans accordingly. In September, we 

announced our decision to halt the clinical 

development of 2158 due to elevated 

alanine transaminase (ALT) levels observed 

in our Phase 2 study. Patient safety is 

paramount and the lessons we gained 

from this study are invaluable as they 

inform our work and the larger HBV field. 

This outcome allowed us to focus on our 

next-generation core inhibitor candidates, 

3733 and 4334, and continue evaluating the 

best and safest candidate to take forward 

into later-stage clinical studies. 

Expanding our Strategic Focus 

Our expanded strategy and pipeline 

progress in 2021 have positioned us to 

reach several key milestones already in 

2022 with both our core inhibitor portfolio 

and our research programs beyond core 

inhibition and HBV. 

We remain focused on advancing our 

clinical programs, including the Phase 2 

triple combination studies with VBR and 

accelerating the clinical development of 

our next-generation core inhibitors. Initial 

antiviral data for 3733 is anticipated before 

year-end 2022, and 4334, our newest core 

inhibitor candidate, which we believe has a 

best-in-class preclinical profile, is expected 

to enter clinical development during the 

second half of the year.

We are also building out new research 

and development programs that will 

leverage our team’s deep virologic drug 

development expertise to explore new 

targets in HBV as well as other viral 

diseases. One such program focuses on 

hepatitis delta virus (HDV). Less is known 

virus, but HDV remains a significant and 

serious health problem without adequate 

treatment in parts of Europe, Af rica, the 

Middle East, Asia and parts of South 

America. 

Referred to as a “satellite virus,” HDV only 

infects those already infected with HBV or 

individuals when they first acquire hepatitis 

B infection. Conservative estimates suggest 

that 12 million people suffer from the 

added burden of HDV, which is known to 

accelerate disease progression and increase 

the incidence of liver cirrhosis and liver 

cancer. It is ultimately associated with 

higher morbidity and mortality rates. In 

our mission to deliver curative treatments 

for individuals with HBV, we also have a 

significant opportunity to address the 

urgent need of those also infected with 

HDV. Our aim and responsibility is to 

improve their quality of life and outcomes. 

Further updates on this program and 

the introduction of another HBV target 

program, as well as R&D initiatives aimed at 

other viruses, will be forthcoming.

Looking ahead, I’m excited to see how we 

can continue to build upon the strength 

of our existing pipeline of potent core 

inhibitor candidates—moving more of 

them to and through the clinic with 

urgency—and expanding our portfolio with 

novel approaches for treating viral diseases 

more broadly. We truly are pioneers in the 

mechanism of core inhibition, and together 

we have the potential to change the way 

our industry approaches virology treatment 

for years to come. 

Wishing you good health, 

John McHutchison, AO, MD

Chief Executive Officer and President

 
     
2022 Key Objectives and 

Anticipated Progress 

     1H 2022

•  Introduce HBV/HDV entry 

inhibitor program 

•  Reveal novel undisclosed HBV 

Target 2

•  Introduce R&D initiatives aimed 

at other viruses (non-HBV) - mid-

year

•  Both Phase 2 Triple Combo 

Studies (IFN and RNAi) fully 

enrolled 

•  Initiate Phase 2 Triple Combo 

Study – ASPIN

•  Initiate Phase 1b Study – 3733

2H 2022

Data     

•  Interim Phase 2 On-Treatment 

Triple Combo Study - IFN

•  Interim Phase 2 On-Treatment 

Data Triple Combo Study – RNAi

•  Initiate Phase 1a Study – 4334

•  Interim Phase 1b Data - 3733

combination with other mechanisms to 

treat HBV when we announced our clinical 

collaboration with Antios Therapeutics. The 

collaborative study with Antios will evaluate 

a triple combination treatment of ATI-2173, 

Antios’ investigational proprietary active site 

polymerase inhibitor nucleotide (ASPIN), 

along with our lead core inhibitor candidate, 

vebicorvir (VBR), and tenofovir disoproxil 

fumarate, an NrtI in patients with HBV. 

Our two ongoing Phase 2 triple combination 

studies of our lead investigational core 

inhibitor candidate, vebicorvir (VBR), plus 

Nrtl therapy, the first with AB-729 Arbutus 

Biopharma’s investigational RNAi candidate, 

and the second with interferon, have both 

completed enrollment, and we anticipate 

initial on-treatment data during the second 

half of this year. 

Other important goals we accomplished in 

2021 include: 

•  Nominating our fourth core inhibitor 

candidate, ABI-4334 (4334), which has 

been optimized for potency, to advance 

into clinical development with the aim of 

initiating clinical studies in 2022

•  Presenting two posters and an oral 

presentation at AASLD The Liver Meeting™ 

focusing on:  

-  preclinical characterization, including 

single-digit nanomolar potency for 4334 

against both pgRNA encapsidation and 

cccDNA formation

-  favorable pharmacokinetics and safety 

results in our Phase 1a study of our next-

generation core inhibitor ABI-H3733 

(3733)

-  positive Phase 2 open-label study data 

for VBR demonstrating the contribution 

of core inhibition to deepen viral 

suppression

•  Reporting the enhanced potency and target 

coverage of both 3733 and our discontinued 

core inhibitor, ABI-H2158 (2158), as compared 

to VBR for both antiviral inhibition and 

cccDNA formation at EASL’s International 
Liver Congress™

•  Reported Phase 1a safety and 

pharmacokinetics data for 3733

In 2021, we also learned from our work 
and clinical study results and adapted 
our strategy and pipeline advancement 
plans accordingly. In September, we 
announced our decision to halt the clinical 
development of 2158 due to elevated 
alanine transaminase (ALT) levels observed 
in our Phase 2 study. Patient safety is 
paramount and the lessons we gained 
from this study are invaluable as they 
inform our work and the larger HBV field. 
This outcome allowed us to focus on our 
next-generation core inhibitor candidates, 
3733 and 4334, and continue evaluating the 
best and safest candidate to take forward 
into later-stage clinical studies. 

Expanding our Strategic Focus 

Our expanded strategy and pipeline 
progress in 2021 have positioned us to 
reach several key milestones already in 
2022 with both our core inhibitor portfolio 
and our research programs beyond core 
inhibition and HBV. 

We remain focused on advancing our 
clinical programs, including the Phase 2 
triple combination studies with VBR and 
accelerating the clinical development of 
our next-generation core inhibitors. Initial 
antiviral data for 3733 is anticipated before 
year-end 2022, and 4334, our newest core 
inhibitor candidate, which we believe has a 
best-in-class preclinical profile, is expected 
to enter clinical development during the 
second half of the year.

We are also building out new research 
and development programs that will 
leverage our team’s deep virologic drug 
development expertise to explore new 
targets in HBV as well as other viral 
diseases. One such program focuses on 
hepatitis delta virus (HDV). Less is known 

in the U.S. healthcare landscape about this 
virus, but HDV remains a significant and 
serious health problem without adequate 
treatment in parts of Europe, Af rica, the 
Middle East, Asia and parts of South 
America. 

Referred to as a “satellite virus,” HDV only 
infects those already infected with HBV or 
individuals when they first acquire hepatitis 
B infection. Conservative estimates suggest 
that 12 million people suffer from the 
added burden of HDV, which is known to 
accelerate disease progression and increase 
the incidence of liver cirrhosis and liver 
cancer. It is ultimately associated with 
higher morbidity and mortality rates. In 
our mission to deliver curative treatments 
for individuals with HBV, we also have a 
significant opportunity to address the 
urgent need of those also infected with 
HDV. Our aim and responsibility is to 
improve their quality of life and outcomes. 
Further updates on this program and 
the introduction of another HBV target 
program, as well as R&D initiatives aimed at 
other viruses, will be forthcoming.

Looking ahead, I’m excited to see how we 
can continue to build upon the strength 
of our existing pipeline of potent core 
inhibitor candidates—moving more of 
them to and through the clinic with 
urgency—and expanding our portfolio with 
novel approaches for treating viral diseases 
more broadly. We truly are pioneers in the 
mechanism of core inhibition, and together 
we have the potential to change the way 
our industry approaches virology treatment 
for years to come. 

Wishing you good health, 

John McHutchison, AO, MD
Chief Executive Officer and President

 
     
[This page intentionally left blank] 

UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
WASHINGTON, DC 20549
FORM 10-K

☒ ANNUAL REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the fiscal year ended December 31, 2021
or

☐ TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the Transition Period from __________ to __________
Commission File Number: 001-35005
ASSEMBLY BIOSCIENCES, INC.
(Exact name of registrant specified in its charter)

Delaware
(State or Other Jurisdiction of
Incorporation or Organization)

20-8729264
(I.R.S. Employer
Identification No.)

331 Oyster Point Blvd., Fourth Floor
South San Francisco, California 94080
(Address of Principal Executive Offices)
Registrant’s telephone number, including area code: (833) 509-4583
Securities Registered Pursuant to Section 12(b) of the Exchange Act:
Trading Symbol(s)
ASMB
Securities Registered Pursuant to Section 12(g) of the Act: None

Title of Each Class
Common Stock, $0.001 Par Value

Name of Exchange on which Registered
The Nasdaq Global Select Market

 No   ☒

Indicate by check mark if the registrant is a well-known seasoned issuer, as defined in Rule 405 of the Securities Act. Yes   ☐    No     ☒
Indicate  by  check  mark  if  the  registrant  is  not  required  to  file  reports  pursuant  to  Section 13  or  Section 15(d)  of  the  Exchange  Act. 
Yes   ☐  
Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act 
of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject 
to such filing requirements for the past 90 days.  Yes     ☒  
Indicate by check mark whether the registrant has submitted electronically every Interactive Data File required to be submitted pursuant to Rule 
405 of Regulation S-T (§ 232.45 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to 
submit such files). Yes     ☒  
Indicate  by  check  mark  whether  the  registrant  is  a  large  accelerated  filer,  an  accelerated  filer,  a  non-accelerated  filer,  a  smaller  reporting 
company, or an emerging growth company. See the definitions of “large accelerated filer,” “accelerated filer,” “smaller reporting company,” and 
“emerging growth company” in Rule 12b-2 of the Exchange Act:
Large accelerated filer

Accelerated filer

 No     ☐

 No     ☐

☐

☐

Non-accelerated filer

☒

Smaller reporting company

Emerging growth company

☒

☐

If an emerging growth company, indicate by check mark if the registrant has elected not to use the extended transition period for complying with 
any new or revised financial accounting standards provided pursuant to Section 13(a) of the Exchange Act.   ☐
Indicate  by  check  mark  whether  the  registrant  has  filed  a  report  on  and  attestation  to  its  management’s  assessment  of  the  effectiveness  of  its 
internal control over financial reporting under Section 404(b) of the Sarbanes-Oxley Act (15 U.S.C. 7262 (b)) by the registered public accounting 
firm that prepared or issued its audit report.    ☐

Indicate by check mark whether the registrant is a shell company (as defined in Rule 12b-2 of the Exchange Act). Yes   ☐   No       ☒
The aggregate market value of the voting stock held by non-affiliates of the registrant, as of June 30, 2021, was $168.3 million. Such aggregate 
market value was computed by reference to the closing price of the common stock as reported on the Nasdaq Global Select Market on June 30, 
2021. For purposes of making this calculation only, the registrant has defined affiliates as including only (1) directors, (2) executive officers and 
(3) certain  stockholders,  if  any,  that  hold  greater  than  10%  of  the  voting  stock  of  the  registrant,  in  each  case,  as  of  June  30,  2021.  Shares  of 
common stock held by other persons, including certain other holders of more than 10% of the registrant’s outstanding common stock, if any, have 
not  been  excluded  from  the  above  calculation  in  that  such  persons  are  not  deemed  to  be  affiliates.  The  determination  of  affiliate  status  is  not 
necessarily a conclusive determination for other purposes.
As of February 28, 2022, there were 48,120,437 shares of the registrant’s common stock, $0.001 par value per share, outstanding.

DOCUMENTS INCORPORATED BY REFERENCE
Part III  of  this  Annual  Report  on  Form  10-K  incorporates  information  by  reference  to  portions  of  the  definitive  proxy  statement  for  the 
Company’s Annual Meeting of Stockholders to be held in 2022, to be filed within 120 days of the registrant’s fiscal year ended December 31, 
2021.

Auditor Firm Id: 42

Auditor Name:  Ernst & Young LLP

Auditor Location:

Redwood City, California

 
 
 
 
 
 
[This page intentionally left blank] 

ASSEMBLY BIOSCIENCES, INC.
TABLE OF CONTENTS

PART I
Item 1.
Business.......................................................................................................................................
Item 1A. Risk Factors .................................................................................................................................
Item 1B. Unresolved Staff Comments........................................................................................................
Properties.....................................................................................................................................
Item 2.
Legal Proceedings .......................................................................................................................
Item 3.
Item 4.
Mine Safety Disclosures..............................................................................................................
PART II
Item 5.

Market for Registrant’s Common Equity, Related Stockholder Matters and Issuer Purchases 
of Equity Securities .....................................................................................................................
[Reserved]....................................................................................................................................
Item 6.
Management’s Discussion and Analysis of Financial Condition and Results of Operation.......
Item 7.
Item 7A. Quantitative and Qualitative Disclosures about Market Risk .....................................................
Financial Statements and Supplementary Data ...........................................................................
Item 8.
Item 9.
Changes in and Disagreements with Accountants on Accounting and Financial Disclosure .....
Item 9A. Controls and Procedures..............................................................................................................
Item 9B. Other Information........................................................................................................................
Item 9C. Disclosure Regarding Foreign Jurisdictions that Prevent Inspections ........................................
PART III
Item 10. Directors, Executive Officers and Corporate Governance ..........................................................
Executive Compensation .............................................................................................................
Item 11.
Security Ownership of Certain Beneficial Owners and Management and Related Stockholder 
Item 12.
Matters.........................................................................................................................................
Certain Relationships and Related Transactions, and Director Independence............................
Item 13.
Principal Accounting Fees and Services .....................................................................................
Item 14.
Exhibits, Financial Statement Schedules.....................................................................................
Item 15.
Item 16.
Form 10-K Summary...................................................................................................................
Financial Statements ......................................................................................................................................

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F-1

i

 
References to Assembly Biosciences, Inc.

Throughout this Annual Report on Form 10-K, the “Company,” “Assembly,” “we,” “us,” and “our,” except where 
the context requires otherwise, refer to Assembly Biosciences, Inc. and its consolidated subsidiaries, and “our board 
of directors” or “the Board” refers to the board of directors of Assembly Biosciences, Inc.

Forward-Looking Statements

This  Annual  Report  on  Form 10-K  contains  “forward-looking  statements”  that  are  subject  to  certain  risks  and 
uncertainties, including, without limitation, those set forth in Part I, Item 1A under the heading “Risk Factors,” that 
could cause actual results to materially differ. Such risks and uncertainties include, among other things:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

our ability to initiate and complete clinical studies involving our therapeutic product candidates, including 
studies contemplated by our clinical collaboration agreements, in the currently anticipated timeframes;

safety  and  efficacy  data  from  clinical  studies  may  not  warrant  further  development  of  our  product 
candidates;

clinical  and  nonclinical  data  presented  at  conferences  may  not  differentiate  our  product  candidates  from 
other companies’ candidates;

results of nonclinical studies may not be representative of disease behavior in a clinical setting and may not 
be predictive of the outcomes of clinical studies;

continued  development  and  commercialization  of  our  hepatitis  B  virus  (HBV)  product  candidates,  if 
successful,  in  the  China  territory  will  be  dependent  on,  and  subject  to,  our  collaboration  agreement 
governing our HBV-related activity in the China territory;

our  ability  to  maintain  financial  resources  necessary  to  continue  our  clinical  studies  and  fund  business 
operations; and

any  impact  that  the  COVID-19  pandemic  may  have  on  our  business  and  operations,  including  initiation, 
enrollment and continuation of our clinical studies or timing of discussions with regulatory authorities.

You are urged to consider statements that include the words may, will, would, could, should, might, believes, hopes, 
estimates, projects, potential, expects, plans, anticipates, intends, continues, forecast, designed, goal or the negative 
of  those  words  or  other  comparable  words  to  be  uncertain  and  forward-looking.  In  particular,  forward-looking 
statements  include,  but  are  not  limited  to,  statements  regarding  the  timing  of  commencement  of  future  clinical 
studies  involving  our  therapeutic  product  candidates;  our  ability  to  successfully  complete,  and  receive  favorable 
results  in,  clinical  trials  for  our  product  candidates;  and  the  expected  impact  of  the  COVID-19  pandemic  on  our 
business  and  operations.  We  intend  such  forward-looking  statements  to  be  covered  by  the  safe  harbor  provisions 
contained  in  Section  27A  of  the  Securities  Act  of  1933,  as  amended  (the  Securities  Act),  and  Section  21E  of  the 
Securities  Exchange  Act  of  1934,  as  amended  (the  Exchange  Act).  Except  as  required  by  law,  we  assume  no 
obligation to update publicly any forward-looking statements, whether as a result of new information, future events 
or otherwise.

ii

PART I

Item 1. Business

Overview

We are a clinical-stage biotechnology company focused on discovery and development of innovative therapeutics 
targeting hepatitis B virus (HBV) and other viral diseases. 

The World Health Organization (WHO) estimates that 296 million people worldwide are chronically infected with 
HBV  as  of  2019.  Our  research  and  development  organizations  are  pursuing  multiple  drug  candidates  designed  to 
inhibit the HBV replication cycle and block the generation of covalently closed circular DNA (cccDNA), with the 
aim of discovering and developing finite and curative therapies for patients with chronic HBV infection. We have 
discovered several novel core inhibitors, which are small molecules that directly target and allosterically modulate 
the HBV core protein in a way that affects assembly and stability of HBV nucleocapsids. In addition, our research 
organization is working on discovering and developing cccDNA disruptors and small molecules targeting two novel 
undisclosed HBV targets.

While we continue our efforts to develop finite and curative therapies for patients with chronic HBV infection, our 
research  organization  recently  launched  an  exploratory  virology  discovery  program  for  compounds  directed  at  a 
number of non-HBV viral targets. These targets, currently expected to be disclosed in mid-2022, were selected to 
leverage the deep antiviral expertise and experience of our research and development organizations against diseases 
with significant unmet medical need.

The ongoing COVID-19 pandemic and its broad, global impacts, including supply chain disruptions, have impacted 
certain aspects of our business, including where and how our employees work in our labs and offices and how and 
when  our  nonclinical  and  clinical  studies  are  conducted.  Early  in  the  pandemic,  our  current  and  future  planned 
clinical  trials  and  preclinical  studies  were  largely  unaffected,  but  as  the  pandemic  has  continued,  we  have 
experienced enrollment delays for our current clinical studies, particularly our two ongoing multi-drug combination 
studies. For more information, see “—Multi-Drug Combination Studies.”

As previously announced, in January 2021, we wound down our Microbiome program to prioritize and focus our 
resources on our virology programs.

HBV Background

HBV is a leading global cause of chronic liver disease and liver transplants. The WHO estimates that, as of 2019, 
296 million people worldwide were infected with HBV, with 1.5 million new infections occurring each year. The 
WHO  also  estimates  that  820,000  people  died  in  2019  because  of  HBV,  mostly  from  complications,  including 
cirrhosis and hepatocellular carcinoma. HBV is a global epidemic and infects more than three times the number of 
people  infected  with  hepatitis  C  virus  and  HIV  infections  combined,  according  to  the  WHO.  Of  the  296  million 
people  living  with  chronic  HBV  infection,  only  approximately  30  million  were  aware  of  their  infection,  and  only 
approximately 6.6 million of those diagnosed received treatment. Few treated patients exhibit cure, defined herein as 
sustained  viral  suppression  (more  than  six  months)  of  HBV  DNA  (less  than  the  lower  limit  of  quantification 
(LLOQ)) after a finite duration of therapy.

Current Treatments

There  have  been  no  new  mechanisms  used  to  treat  chronic  HBV  infection  approved  in  over  25  years.  Current 
therapeutic options for HBV include:

antiviral  medications—including 

(cid:129) Direct  Acting  Antiviral  medications  (Nucelos(t)ide  analog  reverse  transcriptase  inhibitors  (NrtIs)).
(Hepsera®),
Several 
telbivudine (Tyzeka®),  tenofovir  alafenamide  (Vemlidy®),  tenofovir  disoproxil  fumarate  (Viread®)  and
entecavir  (Baraclude®)—effectively  reduce  circulating  virus  levels  by  inhibiting  reverse  transcription.
Chronic  therapy  with  these  agents  can  result  in  reduced  liver  inflammation  and  fibrosis.  Unfortunately,
NrtIs are rarely curative, even after years of therapy, and viral replication resumes when therapy is stopped.

lamivudine 

(Epivir®), 

adefovir 

1

(cid:129)

Pegylated Interferon alfa (Peg-IFNα or interferon). This synthetic version of a substance produced by 
the body to fight infection is used mainly for people infected with HBV who do not want to undergo long-
term treatment (e.g., patients who might want to become pregnant within a few years). It is administered by 
injection.  Cure  rates  are  relatively  low  and  side  effects  may  be  severe,  including  flu-like  symptoms  and 
depression.

HBV Strategy

The goal of our HBV program is to discover and develop finite and curative therapies for those chronically infected 
with  HBV.  Our  efforts  to  forge  a  new  and  differentiated  path  to  develop  finite  and  curative  therapies  for  chronic 
HBV infection are inspired by the hundreds of millions of people living with this condition worldwide. While we 
have  learned  that  combination  therapy  of  our  first-generation  core  inhibitor  product  candidate,  vebicorvir  (VBR), 
with  NrtIs  alone  will  not  result  in  a  finite  and  curative  treatment,  we  believe  that  a  regimen  of  core  inhibitors  in 
combination with NrtI therapy will be the antiviral backbone of future finite and curative therapies. As a result, our 
current business strategy is focused on three parallel paths:

(cid:129) Developing and advancing our next-generation core inhibitors, ABI-H3733 (3733) and ABI-4334 (4334), 

which we believe has a best-in-class preclinical profile;

(cid:129) Assessing core inhibitors in multi-drug combination studies, adding nonoverlapping mechanisms of action 
to the core inhibitor + NrtI antiviral backbone by utilizing our first-generation core inhibitor VBR; and

(cid:129) Discovering and developing additional compounds beyond core inhibitors, including a cccDNA disruptor 

and two other novel preclinical programs.

With  respect  to  our  core  inhibitor  pipeline,  we  have  concise,  data-driven  development  plans  that  we  believe  will 
enable selection of the optimal core inhibitor to advance for finite and curative combination therapies for HBV. We 
intend to further complement our core inhibitor programs with additional new mechanisms of action discovered and 
developed internally as well as externally through collaborations, licenses, partnerships and other types of business 
arrangements.

Our Primary Focus: Targeting HBV Core Protein to Achieve a Cure 

HBV is a DNA virus that infects hepatocytes and establishes a reservoir of cccDNA, a unique viral DNA moiety 
that  resides  in  the  cell  nucleus  of  HBV-infected  hepatocytes  and  is  associated  with  viral  persistence  and  chronic 
infection.  No  currently  approved  oral  therapies  target  cccDNA  activity  directly,  which  makes  molecules  that  can 
modulate  cccDNA  generation  or  disrupt  its  function  highly  sought  in  the  HBV  field.  As  a  result,  most  of  our 
research and development efforts to date have focused on discovering and developing compounds targeting the core 
protein, a viral protein involved in numerous aspects of the HBV replication cycle, including the generation of HBV 
cccDNA. Through our research efforts, we have discovered several chemically distinct series of small molecule core 
inhibitors  that  directly  target  and  allosterically  inhibit  core  protein  functions.  As  a  result,  our  pipeline  offers  the 
potential for both first-in-class and best-in-class compounds that target critical steps involved in cccDNA generation 
and  the  HBV  viral  replication  cycle.  We  believe  that  our  approach  of  targeting  viral  core  protein  and  its  related 
functions provides a promising foundation for finite and curative HBV treatment regimens.

A  benchmark  for  therapeutic  agents  aiming  to  decrease  cccDNA  levels  is  the  use  of  several  key  viral  antigens  as 
surrogate biomarkers of active cccDNA. The same biomarkers can be used in both primary human hepatocyte cells 
and patients. On this basis, our core inhibitors have shown preclinical proof of principle. In a variety of cell culture 
models, core inhibitors have demonstrated the ability to reduce production of viral HBV DNA levels as well as the 
surrogate  markers  for  cccDNA  establishment:  HBV  e  antigen  (HBeAg),  HBV  core-related  antigen  (HBcrAg)  and 
viral pre-genomic RNA (pgRNA). 

Our Core Inhibitor Product Candidates

Our clinical strategy encompasses testing core inhibitors first as a monotherapy in Phase 1, as required by regulatory 
agencies, to demonstrate their intrinsic antiviral activity and safety and subsequently in Phase 2 in combination with 
NrtI and potentially other classes of HBV therapies.

2

Vebicorvir

VBR, our lead core inhibitor product candidate, is licensed from Indiana University. The conduct of our initial Phase 
2  studies,  Study  201  and  202,  is  complete.  In  these  studies,  VBR  administered  with  NrtI  therapy  demonstrated  a 
favorable safety profile and led to greater viral suppression of both HBV DNA and viral pgRNA than NrtI therapy 
alone. 

Finite Therapy Development

Our  most  recently  completed  study  for  VBR,  Study  211,  involved  transitioning  patients  who  met  the  requisite 
stopping  criteria,  as  determined  in  collaboration  with  our  lead  investigators  and  the  U.S.  Food  and  Drug 
Administration (FDA), off of therapy to test for sustained virologic response (SVR). SVR refers to sustained viral 
suppression  (more  than  six  months)  of  HBV  DNA  below  LLOQ  and  would  be  consistent  with  a  successful  finite 
treatment for chronic HBV infection. During the trial, it became clear that patients who stopped therapy in Study 
211  had  not  achieved  SVR,  as  all  patients  relapsed,  meaning  they  had  detectable  HBV  and  the  dual  combination 
therapy  of  VBR  +  NrtI  was  insufficient  to  cure  chronic  HBV  infection  in  the  studied  population.  Based  on  these 
results, we terminated Study 211 in the fourth quarter of 2020. We presented follow-up data from Study 211 related 
to virologic response, safety and resistance following treatment discontinuation, at the European Association for the 
Study  of  the  Liver’s  (EASL)  International  Liver  CongressTM  in  June  2021  (EASL  2021).  At  the  American 
Association  for  the  Study  of  Liver  Diseases  (AASLD)  Annual  Meeting  in  November  2021  (AASLD  2021),  we 
presented  additional  follow-up  data  from  Study  211  demonstrating  that  patients  had  increases  of  HBV  DNA  and 
pgRNA  after  discontinuation  of  VBR  despite  continued  NrtI  treatment,  further  supporting  that  core  inhibitors 
deepen viral suppression in combination with NrtIs.

We  currently  have  two  Phase  2  triple  combination  studies  involving  VBR  ongoing,  with  a  third  expected  to  be 
initiated in the first half of 2022. These studies are detailed below. See “—Multi-Drug Combination Studies.”

Chronic Suppressive Therapy Development

Despite the off-treatment results in Study 211, the Phase 2 studies demonstrated on-treatment that subjects receiving 
VBR + NrtI achieved faster and deeper suppression of viral replication as compared to placebo. Based on these data, 
we  believed  that  the  addition  of  VBR  to  NrtI  therapy  could  potentially  help  two  patient  populations  as  a  chronic 
suppressive  treatment  (CST):  (1)  treatment-naïve  patients,  for  whom  addition  of  VBR  to  NrtI  could  lead  to  faster 
and  deeper  viral  suppression  and  (2)  partially  virologically  suppressed  patients  who  continue  to  have  viral  levels 
above LLOQ by commercial assays, for whom the addition of VBR to NrtI could suppress viral levels below what 
could be achieved by NrtI alone.

In connection with preparation for registrational studies for VBR in CST in 2020, we held a number of discussions 
with leading viral hepatitis experts regarding use of VBR as a CST. In addition, we initiated an additional Phase 2 
study  of  VBR,  Study  205,  to  evaluate  treatment  intensification  with  VBR  in  patients  with  chronic  HBV  infection 
who are only partially virologically suppressed on NrtI. 

In  the  second  half  of  2020,  we  also  held  an  End-of-Phase  2  meeting  with  the  National  Medical  Products 
Administration, Center for Drug Evaluation, China, and reached agreement on a Phase 3 registrational program for 
CST  use  of  VBR  plus  NrtI.  We  also  had  discussions  with  the  FDA  regarding  the  same  Phase  3  registrational 
program.

Based  on  discussions  with  leading  viral  hepatitis  experts,  global  regulatory  discussions  and  feedback,  and,  with 
respect to the China territory, discussions and agreement with our collaboration partner, BeiGene, Ltd. (BeiGene), in 
early 2021, we decided to not move forward with the global registrational studies for VBR as a CST with NrtI. The 
decision was made to focus on the greatest unmet medical need of patients, which lies predominantly in cure, rather 
than CST. As a result, we terminated Study 205 and began to focus our efforts with VBR in combination with NrtI 
and additional mechanisms targeting finite and curative combination therapy.

Next-Generation Core Inhibitors

In pursuit of our goal of developing finite and curative therapies for patients with chronic HBV infection, we plan to 
advance the optimal core inhibitor in our portfolio for use as the antiviral backbone with NrtI. While we currently 
have VBR, our first-generation core inhibitor product candidate, and 3733, a next-generation product candidate, in 
clinical studies, we expect to initiate Phase 1a studies of 4334, our most potent next-generation product candidate in 
the second half of 2022. Based on the clinical progress of these candidates, we will apply disciplined, data-driven 
analyses to identify the optimal candidate to advance into late-stage clinical trials to produce potentially higher cure 
rates than are currently obtainable for patients with chronic HBV infection under the current standard of care.

3

ABI-H3733

Our first of two next-generation core inhibitor product candidates, 3733, was internally discovered and developed. 
The  chemical  scaffold  of  3733  is  novel  and  distinct  from  each  of  VBR,  4334  and  our  discontinued  core  inhibitor 
product candidate, ABI-H2158 (2158).

In  2020,  we  initiated  and  completed  a  Phase  1a  clinical  study  of  3733  to  evaluate  safety,  tolerability  and 
pharmacokinetics  (PK)  following  single  ascending  dose  and  multiple  ascending  dose  administration  in  healthy 
subjects  in  New  Zealand.  Preliminary  data  indicate  that  3733  was  generally  well-tolerated  and  had  favorable  PK. 
Results detailing 3733’s safety and PK from this study were presented in a poster presentation at AASLD 2021.

In  addition,  at  EASL  2021,  we  presented  observations  on  3733’s  enhanced  potency  and  target  coverage  for  both 
antiviral activity and inhibition of cccDNA generation as compared to VBR and 2158.

We expect to initiate a Phase 1b study with an improved formulation of 3733 in patients with chronic HBV infection 
in the first half of 2022.

ABI-4334

In  mid-2021,  we  announced  the  selection  of  4334,  our  other  next-generation  core  inhibitor  product  candidate.  As 
with  all  of  our  core  inhibitor  product  candidates  nominated  after  VBR,  4334  was  internally  discovered  and 
developed. In addition, the chemical scaffold of 4334 is also novel and distinct from each of VBR, 3733 and 2158.

We nominated 4334 based on a preclinical target drug profile that indicates enhanced target coverage and potency to 
prevent both formation of new virus and cccDNA, which is responsible for maintaining the HBV viral reservoir. We 
believe that 4334 has a best-in-class preclinical profile, with single-digit nanomolar potency against the production 
of new virus and the formation of cccDNA. Preclinically to date, 4334 has also demonstrated pan-genotypic activity, 
an improved resistance profile and a favorable safety profile. Preclinical characterization of 4334 was shared in a 
poster presentation at AASLD in November 2021.

Our  preclinical  work  on  4334  is  ongoing,  with  the  aim  of  completing  Investigational  New  Drug  (IND)  enabling 
studies and initiating a Phase 1a clinical study in the second half of 2022.

ABI-2158

In  September  2021,  we  discontinued  development  of  2158  following  the  observation  of  elevated  alanine 
transaminase (ALT) levels in the Phase 2 clinical study consistent with drug-induced hepatotoxicity.

Core Inhibitor Collaboration and License Agreements

Indiana University Research and Technology Corporation

In September 2013, we entered into an exclusive license agreement (the IURTC License Agreement) with Indiana 
University  Research  and  Technology  Corporation  (IURTC)  pursuant  to  which  we  acquired,  with  rights  to 
sublicense,  the  rights  to  develop  and  commercialize  products  associated  with  multiple  patents  and  patent 
applications covering aspects of our HBV program held by IURTC. As part of this agreement, we are obligated to 
make  milestone  payments  based  upon  the  successful  accomplishment  of  clinical  and  regulatory  milestones.  The 
aggregate  amount  of  all  performance  milestone  payments  under  the  IURTC  License  Agreement,  should  all 
performance milestones through development be met, is $0.8 million, with a portion related to the first performance 
milestone having been paid. Under the IURTC License Agreement, we are also obligated to pay IURTC royalties 
based on net sales of the licensed technology ranging from 0.5% to 1.75%. In addition, under the IURTC License 
Agreement, we pay annual diligence maintenance fees of $0.1 million. Milestone payments received by IURTC are 
fully  creditable  against  the  annual  diligence  maintenance  fee  for  the  year  in  which  the  milestone  payments  are 
received.

4

The  IURTC  License  Agreement  may  be  terminated  by  us,  with  or  without  cause,  upon  90  days  advance  written 
notice,  by  IURTC  upon  our  material  breach  with  60  days  advance  written  notice  or  by  IURTC,  in  certain  cases, 
upon our insolvency or bankruptcy immediately upon written notice.

BeiGene, Ltd.

In  July  2020,  we  entered  into  a  Collaboration  Agreement  with  BeiGene,  granting  BeiGene  an  exclusive,  royalty-
bearing license to develop and commercialize products containing VBR, 2158 and 3733 (the BeiGene Agreement) 
in the People’s Republic of China, Hong Kong, Taiwan and Macau (the Territory).

Under  the  BeiGene  Agreement,  we  and  BeiGene  will  collaborate  on  development  activities  with  respect  to  the 
licensed products in accordance with a mutually agreed upon development plan. 

Pursuant to the terms of the BeiGene Agreement, BeiGene paid us an upfront amount of $40.0 million, and we were 
eligible to receive up to approximately $500.0 million in milestone payments, comprised of up to $113.8 million in 
development  and  regulatory  and  $385.0  million  in  net  sales  milestone  payments.  In  September  2021,  we 
discontinued development of 2158 following the observation of elevated ALT levels in the Phase 2 clinical study 
consistent with drug-induced hepatotoxicity. Due to the discontinuation of development of 2158, the maximum cash 
milestone  payments  we  are  eligible  to  receive  for  VBR  and  3733  are  $427.5  million,  comprised  of  up  to  $97.5 
million for development and regulatory milestones and up to $330.0 million in net sales milestones. In addition, we 
are eligible to receive tiered royalties at percentages ranging from the mid-teens to the low 30s of net sales. BeiGene 
has also agreed to pay all development and regulatory costs up to an aggregate of $45.0 million in the Territory for 
VBR,  2158  and  3733.  Following  this  initial  investment,  we  and  BeiGene  will  share  development  costs  for  the 
Territory equally.

The BeiGene Agreement also contains provisions such as representations and warranties of the parties, terms as to 
governance of the collaboration, commercialization and regulatory responsibilities of the parties, and manufacturing 
and supply, including potential adjustments in the event supply costs exceed certain levels. In addition, during the 
term of the BeiGene Agreement, neither party will commercialize any competing products in the Territory.

Under the terms of the BeiGene Agreement, if after 3733 reaches the end of Phase 2 clinical trials we and BeiGene 
are unable to mutually agree on the terms of a Phase 3 global study, BeiGene may elect to terminate the BeiGene 
Agreement  solely  as  it  relates  to  that  compound.  Such  a  termination  would  result  in  us  regaining  all  rights  to  the 
applicable compound in the Territory. In addition, BeiGene may terminate the BeiGene Agreement for convenience 
at any time upon 90 days’ advance written notice to us. The BeiGene Agreement also contains customary provisions 
for termination by either party, including in the event of breach of the BeiGene Agreement, subject to cure.

Multi-Drug Combination Studies

We believe that core inhibitors and NrtI will be central to finite and curative therapies for chronic HBV infection. 
Therefore, as we continue to develop and advance our current and future core inhibitors through clinical studies, we 
plan  to  conduct  multi-drug  combination  studies  in  parallel  that  add  additional  drugs  (or  compounds)  with 
nonoverlapping mechanisms of action to the core inhibitor + NrtI antiviral backbone. Specifically, we plan on only 
incorporating our current and future core inhibitors that have demonstrated they are well-tolerated and effective in 
clinical  studies  in  dual  combination  with  NrtI.  The  300  mg  daily  dose  of  VBR  has  been  observed  to  be  well-
tolerated in all studies conducted to date, with no serious adverse effects or dose-limiting toxicities identified and no 
pattern of treatment-emergent clinical or laboratory abnormalities observed. We currently have two ongoing triple 
combination studies and a third triple combination study expected to start in the first half of 2022 to study VBR in 
combination with NrtI and a third mechanism of action. 

Our  first  triple  combination  study  is  being  conducted  pursuant  to  a  Clinical  Trial  Agreement  with  Arbutus 
Biopharma  Corporation  (Arbutus  Biopharma)  and  consists  of  a  randomized,  multi-center,  open-label  Phase  2 
clinical  study  to  explore  the  safety,  PK  and  antiviral  activity  of  the  triple  combination  of  VBR,  NrtI  and  AB-729 
(Arbutus  Biopharma’s  investigational  RNAi  candidate)  compared  to  the  double  combinations  of  VBR  +  NrtI  and 
AB-729  +  NrtI  in  virologically  suppressed  patients.  This  clinical  study  initiated  in  the  first  quarter  of  2021  and 
completed  enrollment  in  February  2022.  We  expect  to  share  interim  on-treatment  results  from  this  study  in  the 
second half of 2022.

5

Our  second  triple  combination  study  evaluates  VBR  and  NrtI  in  combination  with  interferon  in  treatment-naïve 
HBeAg positive subjects. This study was also initiated in the first quarter of 2021, and we expect enrollment to be 
complete in March 2022. We expect to share interim on-treatment results from this study in the second half of 2022.

Our  third  triple  combination  study  will  be  conducted  pursuant  to  a  Clinical  Trial  Collaboration  Agreement  with 
Antios  Therapeutics,  Inc.  (Antios)  and  will  evaluate  ATI-2173,  Antios’s  investigational  proprietary  active  site 
polymerase  inhibitor  nucleotide  (ASPIN),  VBR  and  tenofovir  disoproxil  fumarate,  an  NrtI.  This  multi-center, 
double-blinded,  placebo-controlled  study  will  evaluate  the  safety,  PK  and  antiviral  activity  of  this  all-oral  triple 
combination. We expect to initiate this study, which will enroll ten treatment-naïve or off-treatment HBeAg negative 
or positive patients in a 12-week treatment study, in the first half of 2022. The study plan initially included a site in 
Ukraine, but we will no longer be conducting the study there due to the instability resulting from Russia’s recent 
invasion of Ukraine. We expect these changes to our study plan to result in a delayed data readout.

In  addition  to  the  above  studies,  we  expect  to  pursue  additional  multi-drug  combinations  that  include  other  or 
additional nonoverlapping mechanisms of action to the core inhibitor + NrtI antiviral backbone, using our current 
and future core inhibitors as they advance in clinical development.

Both  our  first  and  second  triple  combination  studies  have  experienced  enrollment  delays  due  to  the  ongoing 
COVID-19 pandemic. The pandemic has impacted patients and study sites through patient screening delays, travel 
restrictions  and  hesitancy  to  travel  to  study  sites.  The  pandemic  has  also  impacted  our  vendors,  as  our  central 
laboratories  have  been  unable  to  meet  their  contractual  obligations,  and  our  vendors  have  experienced  staffing 
constraints and supply chain-related challenges as they seek to obtain lab kits, reagents and other items necessary to 
enroll  patients  in  our  studies.  As  a  result,  we  were  unable  to  fully  enroll  our  first  and  second  triple  combination 
studies  in  2021  as  initially  planned;  however,  based  on  enrollment  to  date,  we  do  not  believe  these  delays  will 
impact interim data readouts for these studies, which remains on schedule in 2022. 

Beyond Core Inhibitors

In addition to the development and advancement of our core inhibitor portfolio and our current and future multi-drug 
combination  studies,  our  research  and  development  team  is  working  on  discovering  and  developing  cccDNA 
disruptors and small molecules targeting two novel undisclosed HBV targets, which we expect to announce in the 
first half of 2022, to complement our HBV cure strategy. 

In  November  2020,  we  entered  into  an  exclusive,  two-year  collaboration  and  option  agreement  with  Door 
Pharmaceuticals,  LLC  (Door  Pharma)  focused  on  the  development  of  a  novel  class  of  HBV  inhibitors.  Door 
Pharma’s discovery platform targets functions of core protein distinct from viral assembly and have the potential to 
interfere  with  viral  nucleic  acid  including  intra-nuclear  cccDNA,  providing  a  strong  complement  to  our  current 
portfolio. Together with Door Pharma, we are working on identifying cccDNA disruptors, which will be aimed at 
inhibiting  different  intra-nuclear  steps  in  the  viral  replication  cycle  that  complement  the  activity  of  our  core 
inhibitors.

Under  the  terms  of  the  agreement,  Door  Pharma  will  build  upon  its  previous  efforts  to  lead  and  conduct  new 
discovery  research,  which  we  will  fund.  In  return  for  an  up-front  payment  and  success-based  milestones  and 
royalties, we will be granted an exclusive option to license compounds arising from the collaboration and will be 
responsible for the continued development and commercialization of optioned compounds.

Additional Antiviral Opportunities

In addition to our work toward developing finite and curative therapies for patients with chronic HBV infection, we 
have  expanded  our  research  and  development  organizations’  reach  by  pursuing  exploratory  research  on  novel 
compounds targeting other viruses. Our expanded focus leverages the depth and breadth of virology expertise of our 
research and development organization to diversify our pipeline into areas of high unmet medical need. 

We expect to disclose more information regarding these discovery programs on additional viral targets in mid-2022.

Intellectual Property

In regard to our HBV patent estate, we co-own with and exclusively license from Indiana University two issued U.S. 
patents and related foreign patents and patent applications that relate to compositions of matter and methods of using 
VBR.  The  issued  U.S.  patents  are  expected  to  expire  in  2035  and  2036.  In  addition,  we  own  a  U.S.  patent  and 

6

related foreign applications directed to a process for preparing VBR. The issued U.S. patent is expected to expire in 
2038. Finally, we own a U.S. patent application and related foreign applications directed to formulations of VBR; 
any patents issuing therefrom are expected to expire in 2040.

We own a U.S. patent application and related foreign patent applications that relate to compositions of matter and 
methods of using 3733; any patents issuing therefrom are expected to expire in 2039.

We own an international (PCT) application that relates to compositions of matter and methods of using 4334; any 
patents issuing therefrom are expected to expire in 2041.

Finally,  we  own  a  U.S.  patent  and  related  foreign  patents  and  patent  applications  that  relate  to  compositions  of 
matter and methods of using 2158. The issued U.S. patent is expected to expire in 2038.

Government Regulation

Government authorities in the United States, at the federal, state and local level, and in other countries extensively 
regulate,  among  other  things,  the  research,  development,  testing,  manufacture,  including  any  manufacturing 
changes, packaging, storage, recordkeeping, labeling, advertising, promotion, distribution, marketing, post-approval 
monitoring and reporting, import and export of pharmaceutical products, such as those we are developing.   

U.S. drug approval process

In  the  United  States,  the  FDA  regulates  drugs  under  the  Federal  Food,  Drug,  and  Cosmetic  Act  (FDCA)  and 
implementing  regulations.  The  process  of  obtaining  regulatory  approvals  and  subsequent  compliance  with 
appropriate federal, state, local and foreign statutes and regulations requires the expenditure of substantial time and 
financial  resources.  Failure  to  comply  with  the  applicable  U.S.  requirements  at  any  time  during  the  product 
development process, approval process or after approval may subject an applicant to a variety of administrative or 
judicial  sanctions,  such  as  the  FDA’s  refusal  to  approve  pending  applications,  withdrawal  of  an  approval,  license 
revocation,  imposition  of  a  clinical  hold,  issuance  of  warning  letters  and  untitled  letters,  product  recalls,  product 
seizures,  total  or  partial  suspension  of  production  or  distribution,  injunctions,  fines,  refusals  of  government 
contracts, restitution, disgorgement of profits or civil or criminal penalties.

The  process  required  by  the  FDA  before  a  drug  may  be  marketed  in  the  United  States  generally  involves  the 
following:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

completion  of  nonclinical  laboratory  tests  and  animal  studies  in  compliance  with  the  FDA’s  good 
laboratory  practice  (GLP)  regulations  and  applicable  requirements  for  the  humane  use  of  laboratory 
animals or other applicable requirements;

submission to the FDA of an IND which must become effective before human clinical studies may begin;

approval by an independent institutional review board (IRB) or ethics committee at each clinical site before 
each trial may be initiated;

performance  of  adequate  and  well-controlled  human  clinical  studies  in  accordance  with  good  clinical 
practices  (GCP),  and  any  additional  requirements  for  the  protection  of  human  research  patients  and  their 
health information, to establish the safety and efficacy of the proposed drug for each indication;

submission to the FDA of a new drug application (NDA);

satisfactory completion of an FDA inspection of the manufacturing facility or facilities at which the product 
is produced to assess compliance with current good manufacturing practices (cGMP) requirements and to 
assure  that  the  facilities,  methods  and  controls  are  adequate  to  preserve  the  product’s  identity,  strength, 
quality and purity; and

FDA review and approval of the NDA.

7

Nonclinical studies and IND

Nonclinical  studies  include  laboratory  evaluation  of  product  chemistry  and  formulation,  as  well  as in  vitro and 
animal  studies  to  assess  the  potential  for  adverse  events  and  in  some  cases  to  establish  a  rationale  for  therapeutic 
use. The conduct of nonclinical studies is subject to federal regulations and requirements, including GLP regulations 
for  safety/toxicology  studies.  An  IND  sponsor  must  submit  the  results  of  the  nonclinical  tests,  together  with 
manufacturing  information,  analytical  data,  any  available  clinical  data  or  literature  and  plans  for  clinical  studies, 
among  other  things,  to  the  FDA  as  part  of  an  IND.  Some  long-term  nonclinical  testing,  such  as  animal  tests  of 
reproductive adverse events and carcinogenicity, may continue after the IND is submitted. For some products, the 
FDA may waive the need for certain nonclinical tests. An IND automatically becomes effective 30 days after receipt 
by the FDA, unless before that time the FDA raises concerns or questions related to one or more proposed clinical 
studies and places the trial on clinical hold. If an IND or clinical study is placed on clinical hold, the IND sponsor 
and the FDA must resolve any outstanding concerns before the clinical study can begin. As a result, submission of 
an IND may not result in the FDA allowing clinical studies to commence.

Clinical studies

Clinical studies involve the administration of the investigational new drug to human subjects under the supervision 
of qualified investigators in accordance with GCP requirements, which include, among other things, the requirement 
that all research subjects provide their informed consent in writing before their participation in any clinical study. 
Clinical  studies  are  conducted  under  written  study  protocols  detailing,  among  other  things,  the  objectives  of  the 
study, the parameters to be used in monitoring safety, and the effectiveness criteria to be evaluated. A protocol for 
each clinical study and any subsequent protocol amendments must be submitted to the FDA as part of the IND. In 
addition,  an  IRB  at  each  institution  participating  in  the  clinical  study  must  review  and  approve  the  plan  for  any 
clinical study before it commences at that institution, and the IRB must conduct continuing review. The IRB must 
review  and  approve,  among  other  things,  the  study  protocol  and  informed  consent  information  to  be  provided  to 
study subjects. An IRB must operate in compliance with FDA regulations. Information about certain clinical studies 
must  be  submitted  within  specific  timeframes  to  the  National  Institutes  of  Health  for  public  dissemination  at 
www.clinicaltrials.gov.

Human clinical studies are typically conducted in three sequential phases, which may overlap or be combined:

(cid:129)

(cid:129)

(cid:129)

Phase 1: The drug is initially introduced into healthy human subjects or patients with the target disease or 
condition  and  tested  for  safety,  dosage  tolerance,  absorption,  metabolism,  distribution,  excretion  and,  if 
possible, to gain an early indication of its effectiveness.

Phase 2: The drug is administered to a limited patient population to identify possible adverse effects and 
safety  risks,  to  preliminarily  evaluate  the  efficacy  of  the  product  for  specific  targeted  diseases  and  to 
determine dosage tolerance and optimal dosage.

Phase  3: The  drug  is  administered  to  an  expanded  patient  population  in  adequate  and  well-controlled 
clinical studies to generate sufficient data to statistically confirm the efficacy and safety of the product for 
approval, to establish the overall risk-benefit profile of the product and to provide adequate information for 
the labeling of the product.

Progress  reports  detailing  the  results  of  the  clinical  studies  must  be  submitted  at  least  annually  to  the  FDA. 
Additionally, IND safety reports must be submitted to the FDA and the investigators within 15 calendar days after 
determining that the information qualifies for reporting. IND safety reports are required for serious and unexpected 
suspected adverse reactions, findings from animal or in vitro testing or other studies that suggest a significant risk to 
humans, and any clinically important increase in the rate of a serious suspected adverse reaction over that listed in 
the protocol or investigator brochure. In addition, a sponsor must notify the FDA within seven calendar days after 
receiving information concerning any unexpected fatal or life-threatening suspected adverse reaction. Phase 1, Phase 
2 and Phase 3 clinical studies may not be completed successfully within any specified period, or at all. Furthermore, 
the  FDA  or  the  sponsor  may  suspend  or  terminate  a  clinical  study  at  any  time  on  various  grounds,  including  a 
finding that the research subjects are being exposed to an unacceptable health risk. Similarly, an IRB can suspend or 
terminate approval of a clinical study at its institution if the clinical study is not being conducted in accordance with 
the IRB’s requirements or if the drug has been associated with unexpected serious harm to patients.

8

A manufacturer of an investigational drug for a serious disease or condition is required to make available, such as by 
posting  on  its  website,  its  policy  regarding  evaluating  and  responding  to  requests  for  individual  patient  access  to 
such investigational drug. This requirement applies on the earlier of the first initiation of a Phase 2 or Phase 3 trial of 
the investigational drug or, as applicable, 15 days after the drug receives a designation as a breakthrough therapy, 
Fast Track product, or regenerative advanced therapy.

Marketing approval

After the completion of required clinical testing, the results of the nonclinical studies and clinical studies, together 
with detailed information relating to the product’s chemistry, manufacture, controls and proposed labeling, among 
other things, are submitted to the FDA as part of an NDA requesting approval to market the product for one or more 
indications. Under federal law, the submission of most NDAs is additionally subject to a substantial application user 
fee, currently $3.1 million and the sponsor of an approved NDA is also subject to an annual program fee currently 
set at $0.4 million through September 30, 2022. These fees are typically adjusted on October 1 each year.

The FDA conducts a preliminary review of all NDAs within the first 60 days after submission before accepting them 
for filing to determine whether they are sufficiently complete to permit substantive review. The FDA may request 
additional information rather than accept an NDA for filing. In this event, the application must be resubmitted with 
the additional information. The resubmitted application is also subject to review before the FDA accepts it for filing. 
Once the submission is accepted for filing, the FDA begins an in-depth substantive review. The FDA has agreed to 
specified  performance  goals  in  the  review  of  NDAs.  Under  these  goals,  the  FDA  has  committed  to  review  most 
original applications for non-priority products within ten months, and most original applications for priority review 
products,  that  is,  drugs  for  a  serious  or  life-threatening  condition  that  the  FDA  determines  represent  a  significant 
improvement over existing therapy, within six months. For NDAs for novel products, the ten- and six-month time 
periods runs from the filing date; for all other original applications, the ten- and six-month time periods run from the 
submission date. The review process may be extended by the FDA for three additional months to consider certain 
information or clarification regarding information already provided in the submission. Despite these review goals, it 
is not uncommon for FDA review of an NDA to extend beyond the goal date. The FDA may also refer applications 
for novel drugs or products that present difficult questions of safety or efficacy to an advisory committee, typically a 
panel  that  includes  clinicians  and  other  experts,  for  review,  evaluation  and  a  recommendation  as  to  whether  the 
application should be approved. The FDA is not bound by the recommendations of an advisory committee, but it 
considers such recommendations carefully when making decisions.

Before  approving  an  NDA,  the  FDA  typically  will  inspect  the  facility  or  facilities  where  the  product  is 
manufactured. The FDA will not approve an application unless it determines that the manufacturing processes and 
facilities  are  in  compliance  with  cGMP  requirements  and  adequate  to  assure  consistent  production  of  the  product 
within required specifications. In addition, before approving an NDA, the FDA will typically inspect one or more 
clinical sites to assure compliance with GCP and integrity of the clinical data submitted.

After  the  FDA’s  evaluation  of  the  NDA  and  inspection  of  the  manufacturing  facilities,  the  FDA  may  issue  an 
approval letter or a complete response letter. An approval letter authorizes commercial marketing of the drug with 
specific  prescribing  information  for  specific  indications.  A  complete  response  letter  generally  outlines  the 
deficiencies in the submission and may require substantial additional testing or information in order for the FDA to 
reconsider  the  application.  If  and  when  those  deficiencies  have  been  addressed  to  the  FDA’s  satisfaction  in  a 
resubmission  of  the  NDA,  the  FDA  will  issue  an  approval  letter.  The  FDA  has  committed  to  reviewing  such 
resubmissions in two or six months depending on the type of information included. Even with submission of this 
additional information, the FDA ultimately may decide that the application does not satisfy the regulatory criteria for 
approval and refuse to approve the NDA. Even if the FDA approves a product, it may limit the approved indications 
for use for the product, require that contraindications, warnings or precautions be included in the product labeling, 
require that post-approval studies, including Phase 4 clinical studies, be conducted to further assess a drug’s safety 
after approval, require testing and surveillance programs to monitor the product after commercialization, or impose 
other conditions, including distribution and use restrictions or other risk management mechanisms, including Risk 
Evaluation and Mitigation Strategies (REMS), which can materially affect the potential market and profitability of 
the  product  or  impose  new  labeling,  testing  or  distribution  and  use  requirements.  The  FDA  may  prevent  or  limit 
further marketing of a product based on the results of post-market studies or surveillance programs. After approval, 
some  types  of  changes  to  the  approved  product,  such  as  adding  new  indications,  manufacturing  changes  and 
additional labeling claims, are subject to further testing requirements and FDA review and approval. 

9

Fast Track designation

The  FDA  is  required  to  facilitate  and  expedite  the  development  and  review  of  drugs  that  are  intended  for  the 
treatment  of  a  serious  or  life-threatening  disease  or  condition  for  which  there  is  no  effective  treatment  and  which 
demonstrate  the  potential  to  address  unmet  medical  needs  for  the  disease  or  condition.  Under  the  Fast  Track 
program,  the  sponsor  of  a  new  product  candidate  may  request  the  FDA  to  designate  the  product  for  a  specific 
indication as a Fast Track product concurrent with or after the filing of the IND for the product candidate. The FDA 
must determine if the product candidate qualifies for fast track designation within 60 calendar days after receipt of 
the sponsor’s request.

In  addition  to  other  benefits,  such  as  the  ability  to  have  greater  interactions  with  the  FDA,  the  FDA  may  initiate 
review of sections of a Fast Track product’s NDA before the application is complete. This rolling review is available 
if the applicant provides and the FDA approves a schedule for the submission of the remaining information and the 
applicant  pays  applicable  user  fees.  However,  the  FDA’s  time  period  goal  for  reviewing  a  Fast  Track  application 
does  not  begin  until  the  last  section  of  the  NDA  is  submitted.  In  addition,  the  Fast  Track  designation  may  be 
withdrawn  by  the  FDA  if  the  FDA  believes  that  the  designation  is  no  longer  supported  by  data  emerging  in  the 
clinical study process. In 2018, the FDA granted Fast Track designation to VBR for the treatment of patients with 
chronic HBV infection.

Priority review

Under FDA policies, a product candidate may be eligible for priority review, a review generally within a six-month 
time  frame  from  the  time  a  complete  application  is  received  or  filed.  Products  generally  are  eligible  for  priority 
review  if  they  are  intended  for  treatment  of  a  serious  or  life-threatening  disease  or  condition  and  provide  a 
significant  improvement  in  safety  or  effectiveness  compared  to  marketed  products  in  the  treatment,  diagnosis  or 
prevention  of  a  serious  disease  or  condition.  A  fast  track  designated  product  candidate  would  ordinarily  meet  the 
FDA’s criteria for priority review.

Accelerated approval

Under  the  FDA’s  accelerated  approval  regulations,  the  FDA  may  approve  a  drug  for  a  serious  or  life-threatening 
illness  that  provides  meaningful  therapeutic  benefit  to  patients  over  existing  treatments  based  upon  a  surrogate 
endpoint  that  is  reasonably  likely  to  predict  clinical  benefit  or  on  a  clinical  endpoint  that  can  be  measured  earlier 
than  irreversible  morbidity  or  mortality  (IMM).  In  clinical  studies,  a  surrogate  endpoint  is  a  measurement  of 
laboratory or clinical signs of a disease or condition that substitutes for a direct measurement of how a patient feels, 
functions  or  survives.  Surrogate  endpoints  can  often  be  measured  more  easily  or  more  rapidly  than  clinical 
endpoints.  A  product  candidate  approved  on  this  basis  is  subject  to  rigorous  post-marketing  compliance 
requirements,  including  the  completion  of  Phase  4  or  post-approval  clinical  studies  to  confirm  the  effect  on  the 
clinical  endpoint.  Failure  to  conduct  required  post-approval  studies,  or  confirm  a  clinical  benefit  during  post-
marketing  studies,  would  allow  the  FDA  to  withdraw  the  drug  from  the  market  on  an  expedited  basis.  All 
promotional materials for drug candidates approved under accelerated regulations are subject to prior review by the 
FDA.

Breakthrough therapy designation

A sponsor can request designation of a product candidate as a “breakthrough therapy.” A breakthrough therapy is 
defined as a drug that is intended, alone or in combination with one or more other drugs, to treat a serious or life-
threatening  disease  or  condition,  and  preliminary  clinical  evidence  indicates  that  the  drug  may  demonstrate 
substantial improvement over existing therapies on one or more clinically significant endpoints, such as substantial 
treatment effects observed early in clinical development. Drugs designated as breakthrough therapies also may be 
eligible  for  priority  review.  The  FDA  must  take  certain  actions,  such  as  holding  timely  meetings  and  providing 
advice, intended to expedite the development and review of an application for approval of a breakthrough therapy. 
Even if a product qualifies for one or more of these programs, the FDA may later decide that the product no longer 
meets  the  conditions  for  qualification  or  decide  that  the  time  period  for  FDA  review  or  approval  will  not  be 
shortened. 

10

Orphan drugs 

Under the Orphan Drug Act, as amended, the FDA may grant orphan drug designation to drugs intended to treat a 
rare  disease  or  condition,  which  is  generally  defined  as  a  disease  or  condition  that  affects  fewer  than  200,000 
individuals  in  the  United  States  or  that  affects  more  than  200,000  individuals  in  the  United  States  and  for  which 
there  is  no  reasonable  expectation  that  the  cost  of  developing  and  making  available  the  drug  for  the  disease  or 
condition  will  be  recovered  from  sales  of  the  product  in  the  United  States.  Orphan  drug  designation  must  be 
requested  before  submitting  an  NDA  or  BLA.  After  the  FDA  grants  orphan  drug  designation,  the  identity  of  the 
product and its potential orphan use are disclosed publicly by the FDA. Orphan drug designation does not shorten 
the  duration  of  the  regulatory  review  and  approval  process.  The  first  NDA  or  BLA  applicant  to  receive  FDA 
approval for a particular active moiety to treat a particular disease with FDA orphan drug designation is entitled to a 
seven-year exclusive marketing period in the United States for that product and indication. During the seven-year 
exclusivity period, the FDA may not approve any other applications to market the same drug for the same orphan 
indication, except in limited circumstances, such as a showing of clinical superiority to the product with orphan drug 
exclusivity. A drug will be considered clinically superior if it is shown to be safer, more effective or makes a major 
contribution to patient care. Orphan drug exclusivity does not prevent the FDA from approving a different drug for 
the same orphan disease or condition, or the same drug for a different disease or condition. Among the other benefits 
of orphan drug designation are tax credits for certain research and a waiver of the NDA/BLA application user fee.

Pediatric information

Under  the  Pediatric  Research  Equity  Act  of  2003,  as  amended,  an  NDA  or  supplement  to  an  NDA  for  drug  with 
certain novel features (e.g., new active ingredient, new indication) must contain data that are adequate to assess the 
safety  and  effectiveness  of  the  drug  for  the  claimed  indications  in  all  relevant  pediatric  subpopulations,  and  to 
support dosing and administration for each pediatric subpopulation for which the product is safe and effective. The 
FDA  may,  on  its  own  initiative  or  at  the  request  of  the  applicant,  grant  deferrals  for  submission  of  some  or  all 
pediatric data until after approval of the product for use in adults, or full or partial waivers from the pediatric data 
requirements. A sponsor of a new drug subject to the above pediatric testing requirements also is required to submit 
to the FDA a pediatric study plan generally 60 days after an end-of-Phase 2 meeting with the agency. Generally, the 
pediatric data requirements do not apply to products with orphan drug designation.

Other regulatory requirements

Any drug manufactured or distributed by us pursuant to FDA approvals will be subject to pervasive and continuing 
regulation  by  the  FDA,  including,  among  other  things,  requirements  relating  to  recordkeeping,  periodic  reporting, 
product sampling and distribution, advertising and promotion and reporting of adverse experiences with the product. 
After approval, most changes to the approved product, such as adding new indications or other labeling claims, are 
subject to prior FDA review and approval.

The FDA may impose a number of post-approval requirements, including REMS, as a condition of approval of an 
NDA  or  BLA.  For  example,  the  FDA  may  require  post-marketing  testing,  including  Phase  4  clinical  studies,  and 
surveillance to further assess and monitor the product’s safety and effectiveness after commercialization.

In addition, drug manufacturers and other entities involved in the manufacture and distribution of approved drugs 
are  required  to  register  their  establishments  with  the  FDA  and  state  agencies  and  are  subject  to  periodic 
unannounced inspections by the FDA and these state agencies for compliance with cGMP requirements. Changes to 
the  manufacturing  process  are  strictly  regulated  and  often  require  prior  FDA  approval  before  being  implemented. 
FDA regulations also require investigation and correction of any deviations from cGMP and impose reporting and 
documentation  requirements  upon  us  and  any  third-party  manufacturers  that  we  may  decide  to  use.  Accordingly, 
manufacturers  must  continue  to  expend  time,  money  and  effort  in  the  areas  of  production  and  quality  control  to 
maintain cGMP compliance.

11

Once an approval is granted, the FDA may withdraw the approval if compliance with regulatory requirements and 
standards is not maintained or if problems occur after the product reaches the market. Later discovery of previously 
unknown  problems  with  a  product,  including  adverse  events  of  unanticipated  severity  or  frequency,  or  with 
manufacturing processes, or failure to comply with regulatory requirements, may result in revisions to the approved 
labeling  to  add  new  safety  information,  imposition  of  post-market  studies  or  clinical  studies  to  assess  new  safety 
risks or imposition of distribution or other restrictions under a REM program. Other potential consequences include, 
among other things:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

restrictions on the marketing or manufacturing of the product, complete withdrawal of the product from the 
market or product recalls;

fines, warning letters or holds on post-approval clinical studies;

refusal of the FDA to approve pending applications or supplements to approved applications, or suspension 
or revocation of product approvals;

product seizure or detention, or refusal to permit the import or export of products; or

consent decrees, injunctions or the imposition of civil or criminal penalties.

The FDA strictly regulates marketing, labeling, advertising and promotion of products that are placed on the market. 
Drugs generally may be promoted only for the approved indications and in accordance with the provisions of the 
approved labeling. The FDA and other agencies actively enforce the laws and regulations prohibiting the promotion 
of  off  label  uses,  and  a  company  that  is  found  to  have  improperly  promoted  off  label  uses  may  be  subject  to 
significant liability.

Physician Drug Samples

As part of the sales and marketing process, pharmaceutical companies frequently provide samples of approved drugs 
to  physicians.  The  Prescription  Drug  Marketing  Act  (PDMA)  regulates  the  distribution  of  drug  samples  at  the 
federal level and sets minimum standards for the registration and regulation of drug distributors by the states. Both 
the  PDMA  and  state  laws  limit  the  distribution  of  prescription  pharmaceutical  product  samples  and  impose 
requirements to ensure accountability in distribution. In addition, the PDMA sets forth civil and criminal penalties 
for violations.

Foreign Regulation

In order to market any product outside of the United States, we would need to comply with numerous and varying 
regulatory requirements of other countries regarding safety and efficacy and governing, among other things, clinical 
studies, marketing authorization, commercial sales and distribution of our products. Whether or not we obtain FDA 
approval for a product, we would need to obtain the necessary approvals by the comparable regulatory authorities of 
foreign  countries  before  we  can  commence  clinical  studies  or  marketing  of  the  product  in  those  countries.  The 
approval  process  varies  from  country  to  country  and  can  involve  additional  product  testing  and  additional 
administrative  review  periods.  The  time  required  to  obtain  approval  in  other  countries  might  differ  from  and  be 
longer  than  that  required  to  obtain  FDA  approval.  Regulatory  approval  in  one  country  does  not  ensure  regulatory 
approval in another, but a failure or delay in obtaining regulatory approval in one country may negatively impact the 
regulatory process in others.

New Legislation and Regulations

From  time  to  time,  legislation  is  drafted,  introduced  and  passed  in  Congress  that  could  significantly  change  the 
statutory  provisions  governing  the  testing,  approval,  manufacturing  and  marketing  of  products  regulated  by  the 
FDA. In addition to new legislation, FDA regulations and policies are often revised or interpreted by the agency in 
ways  that  may  significantly  affect  our  business  and  our  products.  It  is  impossible  to  predict  whether  further 
legislative changes will be enacted or whether FDA regulations, guidance, policies or interpretations will be changed 
or what the effect of such changes, if any, may be.

12

Pharmaceutical Coverage, Pricing and Reimbursement

Significant uncertainty exists as to the coverage and reimbursement status of any drug products for which we may 
obtain regulatory approval. Sales of any of our product candidates, if approved, will depend, in part, on the extent to 
which the costs of the products will be covered by third-party payors, including government health programs such as 
Medicare and Medicaid, commercial health insurers and managed care organizations. The process for determining 
whether a payor will provide coverage for a drug product may be separate from the process for setting the price or 
reimbursement rate that the payor will pay for the drug product once coverage is approved. Third-party payors may 
limit  coverage  to  specific  drug  products  on  an  approved  list,  or  formulary,  which  might  not  include  all  of  the 
approved drugs for a particular indication.

In  order  to  secure  coverage  and  reimbursement  for  any  product  that  might  be  approved  for  sale,  we  may  need  to 
conduct expensive pharmacoeconomic studies in order to demonstrate the medical necessity and cost-effectiveness 
of  the  product,  in  addition  to  the  trials  required  to  obtain  FDA  or  other  comparable  regulatory  approvals.  Our 
product  candidates  may  not  be  considered  medically  necessary  or  cost-effective.  A  payor’s  decision  to  provide 
coverage for a drug product does not imply that an adequate reimbursement rate will be approved. Companies may 
also need to provide discounts to purchasers, private health plans or government healthcare programs. Third-party 
reimbursement  may  not  be  sufficient  to  enable  us  to  maintain  price  levels  high  enough  to  realize  an  appropriate 
return  on  our  investment  in  product  development.  Further,  one  payor’s  determination  to  provide  coverage  for  a 
product  does  not  assure  that  other  payors  will  also  provide  coverage  and  reimbursement  for  the  product,  and  the 
level of coverage and reimbursement can differ significantly from payor to payor.

The containment of healthcare costs has become a priority of federal, state and foreign governments, and the prices 
of  drugs  have  been  a  focus  in  this  effort.  Third-party  payors  are  increasingly  challenging  the  prices  charged  for 
medical products and services and examining the medical necessity and cost-effectiveness of medical products and 
services, in addition to their safety and efficacy. If these third-party payors do not consider our products to be cost-
effective compared to other available therapies, they may not cover our products after approval as a benefit under 
their plans or, if they do, the level of payment may not be sufficient to allow us to sell our products at a profit. The 
U.S. government, state legislatures and foreign governments have shown significant interest in implementing cost 
containment programs to limit the growth of government-paid health care costs, including price controls, restrictions 
on reimbursement and requirements for substitution of generic products for branded prescription drugs. Adoption of 
such controls and measures and tightening of restrictive policies in jurisdictions with existing controls and measures, 
could limit payments for pharmaceuticals such as the drug candidates that we are developing and could adversely 
affect our net revenue and results. Even if favorable coverage and reimbursement status is attained for one or more 
products for which we may receive regulatory approval, less favorable coverage policies and reimbursement rates 
may be implemented in the future.

Pricing  and  reimbursement  schemes  vary  widely  from  country  to  country.  Some  countries  provide  that  drug 
products  may  be  marketed  only  after  a  reimbursement  price  has  been  agreed.  Some  countries  may  require  the 
completion  of  additional  studies  that  compare  the  cost-effectiveness  of  a  particular  product  candidate  to  currently 
available therapies. For example, the European Union provides options for its member states to restrict the range of 
drug products for which their national health insurance systems provide reimbursement and to control the prices of 
medicinal products for human use. European Union member states may approve a specific price for a drug product 
or may instead adopt a system of direct or indirect controls on the profitability of us placing the drug product on the 
market.  Other  member  states  allow  companies  to  fix  their  own  prices  for  drug  products  but  monitor  and  control 
company profits. The downward pressure on health care costs in general, particularly prescription drugs, has become 
very intense. As a result, increasingly high barriers are being erected to the entry of new products. In addition, in 
some countries, cross-border imports from low-priced markets exert competitive pressure that may reduce pricing 
within a country. There can be no assurance that any country that has price controls or reimbursement limitations for 
drug products will allow favorable reimbursement and pricing arrangements for any of our products.

The marketability of any products for which we may receive regulatory approval for commercial sale is dependent 
on  the  availability  of  adequate  coverage  and  reimbursement  from  government  and  third-party  payors.  In  addition, 
the  emphasis  on  managed  care  in  the  United  States  has  increased  and  we  expect  will  continue  to  increase  the 
pressure  on  drug  pricing.  Coverage  policies,  third-party  reimbursement  rates  and  drug  pricing  regulation  may 
change  at  any  time.  In  particular,  in  the  United  States,  the  Affordable  Care  Act  (ACA)  and  its  amendment,  the 
Health  Care  and  Education  Reconciliation  Act,  contains  provisions  that  may  reduce  the  profitability  of  drug 

13

products,  including,  for  example,  increased  rebates  for  drugs  sold  to  Medicaid  programs,  extension  of  Medicaid 
rebates to Medicaid managed care plans, mandatory discounts for certain Medicare Part D beneficiaries and annual 
fees based on pharmaceutical companies’ share of sales to federal health care programs.

Among the provisions of the ACA of importance to our potential drug candidates are the following:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

an  annual,  nondeductible  fee  on  any  entity  that  manufactures  or  imports  specified  branded  prescription 
drugs;

an  increase  in  the  statutory  minimum  rebates  a  manufacturer  must  pay  under  the  Medicaid  Drug  Rebate 
Program;

expansion  of  healthcare  fraud  and  abuse  laws,  including  the  False  Claims  Act  and  the  Anti-Kickback 
Statute, new government investigative powers, and enhanced penalties for noncompliance;

a new Medicare Part D coverage gap discount program, in which manufacturers must agree to offer 70% 
point-of-sale discounts off negotiated prices of applicable brand drugs under the Bipartisan Budget Act of 
2018 (BBA);

extension of manufacturers’ Medicaid rebate liability;

expansion of eligibility criteria for Medicaid programs;

expansion of the entities eligible for discounts under the Public Health Service Act pharmaceutical pricing 
program;

requirements to report financial arrangements with physicians and teaching hospitals;

a  requirement  to  annually  report  drug  samples  that  manufacturers  and  distributors  provide  to  physicians; 
and

a Patient-Centered Outcomes Research Institute to oversee, identify priorities in, and conduct comparative 
clinical effectiveness research, along with funding for such research.

Since its enactment, there have been many judicial, Presidential, and Congressional challenges to numerous aspects 
of the ACA. For example, former President Trump issued several executive orders and other directives designed to 
delay, circumvent, or loosen certain requirements or implementation of certain requirements mandated by the ACA. 
Concurrently, Congress has considered legislation that would repeal, or repeal and replace all or part of the ACA. 
While  Congress  has  not  passed  comprehensive  repeal  legislation,  several  bills  affecting  the  implementation  of 
certain taxes under the ACA have been signed into law. For example, the Tax Cuts and Jobs Act, signed into law in 
2017,  effectively  repealed  the  individual  health  insurance  mandate,  which  is  considered  a  key  component  of  the 
ACA. On December 14, 2018, a U.S. District Court Judge in the Northern District of Texas ruled that the individual 
mandate is a critical and inseverable feature of the ACA, and because it was repealed as part of the Tax Act, the 
remaining  provisions  of  the  ACA  are  invalid  as  well.  In  December  2019,  the  U.S.  Court  of  Appeals  for  the  Fifth 
Circuit upheld the lower court decision, which was then appealed to the U.S. Supreme Court. On June 17, 2021, the 
U.S.  Supreme  Court  held  that  state  and  individual  plaintiffs  did  not  have  standing  to  challenge  the  individual 
mandate  provision  of  the  ACA;  in  so  holding,  the  Supreme  Court  did  not  consider  larger  constitutional  questions 
about the validity of this provision or the validity of the ACA in its entirety. Further, the Trump Administration’s 
2020  federal  spending  package  permanently  eliminated,  effective  January  1,  2020,  the  ACA-mandated  “Cadillac” 
tax on certain high-cost employer-sponsored insurance plans and, on January 1, 2021, eliminated the health insurer 
tax. Moreover, the BBA, among other things, amended the ACA to close the coverage gap in most Medicare drug 
plans, commonly referred to as the “donut hole”. 

In addition, other legislative changes have been proposed and adopted since the ACA was enacted. These changes 
included aggregate reductions to Medicare payments to providers of up to 2% per fiscal year, and, due to subsequent 
legislative amendments, will remain in effect through 2030, with the exception of a temporary suspension from May 
1, 2020 through March 2021, due to the COVID-19 pandemic. Following the temporary suspension, a 1% payment 

14

reduction will occur beginning April 1, 2022 through June 30, 2022, and the 2% payment reduction will resume on 
July 1, 2022. Further, in January 2013, then President Obama signed into law the American Taxpayer Relief Act of 
2012,  which,  among  other  things,  reduced  Medicare  payments  to  several  providers,  and  increased  the  statute  of 
limitations period for the government to recover overpayments to providers from three to five years. These laws may 
result in additional reductions in Medicare and other healthcare funding.

Additionally, there has been increasing legislative and enforcement interest in the United States with respect to drug 
pricing  practices.  Specifically,  there  have  been  several  recent  United  States  Congressional  inquiries  and  proposed 
and enacted federal legislation designed to, among other things, bring more transparency to drug pricing, reduce the 
cost  of  prescription  drugs  under  Medicare,  review  the  relationship  between  pricing  and  manufacturer  patient 
programs,  and  reform  government  program  reimbursement  methodologies  for  drugs.  For  example,  at  the  federal 
level, President Biden signed an Executive Order on July 9, 2021 affirming the administration’s policy to (1) support 
legislative reforms that would lower the prices of prescription drug and biologics, including by allowing Medicare to 
negotiate drug prices, by imposing inflation caps, and, by supporting the development and market entry of lower-
cost generic drugs and biosimilars; and (2) support the enactment of a public health insurance option. Among other 
things,  the  Executive  Order  also  directs  HHS  to  provide  a  report  on  actions  to  combat  excessive  pricing  of 
prescription drugs, enhance the domestic drug supply chain, reduce the price that the Federal government pays for 
drugs,  and  address  price  gouging  in  the  industry;  and  directs  the  FDA  to  work  with  states  and  Indian  Tribes  that 
propose  to  develop  section  804  Importation  Programs  in  accordance  with  the  Medicare  Prescription  Drug, 
Improvement, and Modernization Act of 2003, and the FDA’s implementing regulations. In addition, in September 
2020, the FDA issued a final rule that sets up a legal framework for allowing the importation of certain prescription 
drugs from Canada, and the Centers for Medicare & Medicaid Services (CMS) issued guidance that addresses the 
treatment  of  certain  imported  drugs  under  the  Medicaid  Drug  Rebate  Program.  On  December  27,  2021,  CMS 
rescinded  an  interim  final  rule  that  would  have  implemented  former  President  Trump’s  Most  Favored  Nation 
executive order tying Medicare Part B payments for certain physician-administered drugs to the lowest price paid in 
other economically advanced countries. 

Additionally,  on  November  30,  2020,  HHS  published  a  regulation  removing  safe  harbor  protection  for  price 
reductions from pharmaceutical manufacturers to plan sponsors under Part D, either directly or through pharmacy 
benefit  managers,  unless  the  price  reduction  is  required  by  law.  The  rule  also  creates  a  new  safe  harbor  for  price 
reductions  reflected  at  the  point-of-sale,  as  well  as  a  safe  harbor  for  certain  fixed  fee  arrangements  between 
pharmacy  benefit  managers  and  manufacturers.  Pursuant  to  court  order,  the  removal  and  addition  of  the 
aforementioned  safe  harbors  were  delayed  and  recent  legislation  imposed  a  moratorium  on  implementation  of  the 
rule  until  January  1,  2026.  Although  a  number  of  these  and  other  proposed  measures  may  require  authorization 
through additional legislation to become effective, and the Biden administration may reverse or otherwise change 
these  measures,  both  the  Biden  administration  and  Congress  have  indicated  that  they  will  continue  to  seek  new 
legislative measures to control drug costs.

Other Healthcare Laws

In the United States, our activities are potentially subject to regulation by various federal, state and local authorities 
in  addition  to  the  FDA,  including  but  not  limited  to,  CMS,  other  divisions  of  the  U.S.  Department  of  Health  and 
Human Services (e.g., the Office of Inspector General), the U.S. Department of Justice (DOJ), and individual U.S. 
Attorney offices within the DOJ, and state and local governments. For example, the Company’s business practices, 
including  its  research  and  sales,  marketing  and  scientific/  educational  grant  programs  may  be  required  to  comply 
with federal and state fraud and abuse laws, false claims laws, the data privacy and security provisions of the Health 
Insurance  Portability  and  Accountability  Act  (HIPAA),  federal  transparency  requirements  and  similar  state  laws, 
each as amended. The laws that may affect our ability to operate include:

(cid:129)

the federal Anti-Kickback Statute, which prohibits, among other things, knowingly and willfully soliciting, 
receiving,  offering  or  paying  any  remuneration  (including  any  kickback,  bribe,  or  rebate),  directly  or 
indirectly,  overtly  or  covertly,  in  cash  or  in  kind,  to  induce,  or  in  return  for,  either  the  referral  of  an 
individual, or the purchase, lease, order or recommendation of any good, facility, item or service for which 
payment may be made, in whole or in part, under a federal healthcare program, such as the Medicare and 
Medicaid  programs.  A  person  or  entity  can  be  found  guilty  of  violating  the  statute  without  actual 
knowledge of the statute or specific intent to violate it. The Anti-Kickback Statute has been interpreted to 

15

apply to arrangements between pharmaceutical manufacturers on the one hand and prescribers, purchasers, 
and formulary managers on the other;

(cid:129)

federal  civil  and  criminal  false  claims  laws  and  civil  monetary  penalty  laws,  such  as  the  federal  False 
Claims Act, which impose criminal and civil penalties and authorize civil whistleblower or qui tam actions, 
against individuals or entities for, among other things: knowingly presenting, or causing to be presented, to 
the federal government, claims for payment that are false or fraudulent; making a false statement or record 
material  to  a  false  or  fraudulent  claim  or  obligation  to  pay  or  transmit  money  or  property  to  the  federal 
government; or knowingly concealing or knowingly and improperly avoiding or decreasing an obligation to 
pay money to the federal government. In addition, the government may assert that a claim including items 
and services resulting from a violation of the federal Anti-Kickback Statute constitutes a false or fraudulent 
claim for purposes of the False Claims Act. Manufacturers can be held liable under the False Claims Act 
even  when  they  do  not  submit  claims  directly  to  government  payors  if  they  are  deemed  to  “cause”  the 
submission of false or fraudulent claims;

(cid:129) HIPAA,  which  created  new  federal  criminal  statutes  that  prohibit  knowingly  and  willfully  executing,  or 
attempting to execute, a scheme to defraud any healthcare benefit program or obtain, by means of false or 
fraudulent  pretenses,  representations,  or  promises,  any  of  the  money  or  property  owned  by,  or  under  the 
custody or control of, any healthcare benefit program, regardless of the payor (e.g., public or private) and 
knowingly  and  willfully  falsifying,  concealing  or  covering  up  by  any  trick  or  device  a  material  fact  or 
making  any  materially  false  statements  in  connection  with  the  delivery  of,  or  payment  for,  healthcare 
benefits,  items  or  services  relating  to  healthcare  matters.  Similar  to  the  federal  Anti-Kickback  Statute,  a 
person or entity can be found guilty of violating HIPAA without actual knowledge of the statute or specific 
intent to violate it;

(cid:129) HIPAA,  as  amended  by  HITECH,  and  their  respective  implementing  regulations,  which  impose 
requirements on certain covered healthcare providers, health plans, and healthcare clearinghouses as well as 
their  respective  business  associates  that  perform  services  for  them  that  involve  the  use,  or  disclosure  of, 
individually  identifiable  health  information,  relating  to  the  privacy,  security  and  transmission  of 
individually  identifiable  health  information.  HITECH  also  created  new  tiers  of  civil  monetary  penalties, 
amended HIPAA to make civil and criminal penalties directly applicable to business associates, and gave 
state  attorneys  general  new  authority  to  file  civil  actions  for  damages  or  injunctions  in  federal  courts  to 
enforce the federal HIPAA laws and seek attorneys’ fees and costs associated with pursuing federal civil 
actions;

(cid:129)

(cid:129)

(cid:129)

(cid:129)

the federal false statements statute prohibits knowingly and willfully falsifying, concealing or covering up a 
material  fact  or  making  any  materially  false  statement  in  connection  with  the  delivery  of  or  payment  for 
healthcare benefits, items or services;

the  U.S.  federal  Food,  Drug  and  Cosmetic  Act  (FDCA),  which  prohibits,  among  other  things,  the 
adulteration or misbranding of drugs, biologics and medical devices;

the federal transparency requirements under the ACA, including the provision commonly referred to as the 
Physician Payments Sunshine Act, which requires manufacturers of drugs, devices, biologics and medical 
supplies  for  which  payment  is  available  under  Medicare,  Medicaid  or  the  Children’s  Health  Insurance 
Program to report annually to the U.S. Department of Health and Human Services information related to 
payments or other transfers of value made to physicians and teaching hospitals, as well as ownership and 
investment  interests  held  by  physicians  and  their  immediate  family  members.  Effective  January  1,  2022, 
these reporting obligations will extend to include transfers of value made to certain non-physician providers 
such as physician assistants and nurse practitioners; and

federal consumer protection and unfair competition laws, which broadly regulate marketplace activities and 
activities that potentially harm consumers.

Additionally,  we  are  subject  to  state  and  non-U.S.  equivalents  of  each  of  the  healthcare  laws  described  above, 
among  others,  some  of  which  may  be  broader  in  scope  and  may  apply  regardless  of  the  payor.  Many  U.S.  states 
have adopted laws similar to the federal Anti-Kickback Statute, some of which apply to the referral of patients for 

16

healthcare services reimbursed by any source, not just governmental payors, including private insurers. In addition, 
some  states  have  passed  laws  that  require  pharmaceutical  companies  to  comply  with  the  April 2003  Office  of 
Inspector  General  Compliance  Program  Guidance  for  Pharmaceutical  Manufacturers  and/or  the  Pharmaceutical 
Research and Manufacturers of America’s Code on Interactions with Healthcare Professionals. Several states also 
impose other marketing restrictions or require pharmaceutical companies to make marketing or price disclosures to 
the  state.  There  are  ambiguities  as  to  what  is  required  to  comply  with  these  state  requirements  and  if  we  fail  to 
comply with an applicable state law requirement, we could be subject to penalties.

In addition, regulators globally are also imposing greater monetary fines for privacy violations. The General Data 
Protection Regulation (GDPR), which went into effect on May 25, 2018, applies to any company established in the 
European Union (EU) as well as to those outside the EU if they collect and use personal data in connection with the 
offering goods or services to individuals in the EU or the monitoring of their behavior. The GDPR enhances data 
protection obligations for processors and controllers of personal data, including, for example, expanded disclosures 
about  how  personal  information  is  to  be  used,  limitations  on  retention  of  information,  mandatory  data  breach 
notification requirements and onerous new obligations on services providers. Noncompliance with the GDPR may 
result in monetary penalties of up to €20 million or 4% of worldwide revenue, whichever is higher. The GDPR also 
confers a private right of action on data subjects and consumer associations to lodge complaints with supervisory 
authorities, seek judicial remedies, and obtain compensation for damages resulting from violations. In addition, the 
GDPR includes restrictions on cross-border data transfers. The GDPR may increase our responsibility and liability 
in relation to personal data that we process where such processing is subject to the GDPR, and we may be required 
to put in place additional mechanisms to ensure compliance with the GDPR, including as implemented by individual 
countries.

California enacted the California Consumer Privacy Act (CCPA), which creates new individual privacy rights for 
California  consumers  (as  defined  in  the  law)  and  places  increased  privacy  and  security  obligations  on  entities 
handling personal data of consumers or households. The CCPA will require covered companies to provide certain 
disclosures  to  consumers  about  its  data  collection,  use  and  sharing  practices,  and  to  provide  affected  California 
residents with ways to opt-out of certain sales or transfers of personal information. The CCPA went into effect on 
January 1, 2020, and the California Attorney General began taking enforcement action against violators beginning 
July 1, 2020. While there is currently an exception for protected health information that is subject to HIPAA and 
clinical  trial  regulations,  as  currently  written,  the  CCPA  may  impact  our  business  activities.  Additionally,  the 
California Privacy Rights Act (CPRA) was passed in November 2020 and will become effective on January 1, 2023. 
Among other things, the CPRA imposes additional obligations on companies covered by the legislation and expands 
consumers’ rights with respect to certain sensitive personal information. The CPRA also creates a new state agency 
that  will  be  vested  with  authority  to  implement  and  enforce  the  CCPA  and  the  CPRA.  Virginia  and  Colorado 
similarly passed data privacy laws that will go into effect in January 2023 and will regulate how businesses collect 
and share personal information.

Competition

The pharmaceutical and biotechnology industry is very competitive, and the development and commercialization of 
new  drugs  is  influenced  by  rapid  technological  developments  and  innovation.  We  face  competition  from  several 
companies  developing  and  commercializing  products  that  will  be  competitive  with  our  drug  candidates,  including 
large  pharmaceutical  and  smaller  biotechnology  companies.  Additionally,  new  entrants  may  potentially  enter  the 
market.  Potential  competitors  include  Johnson  &  Johnson,  Roche,  Gilead  Sciences  Inc.,  GlaxoSmithKline  plc, 
Enanta  Pharmaceuticals,  Inc.,  HEC  Pharma,  Arbutus  Biopharma,  Vir  Bio,  Aligos  Therapeutics,  Antios  and  Qilu 
Pharmaceutical,  among  others.  Additionally,  we  may  face  competition  from  currently  available  HBV  treatments. 
Some of the competitive development programs from these companies may be based on scientific approaches that 
are  similar  to  our  approach,  and  others  may  be  based  on  entirely  different  approaches.  Potential  competitors  also 
include academic institutions, government agencies and other public and private research organizations that conduct 
research, seek patent protection and establish collaborative arrangements for research, development, manufacturing 
and commercialization of products similar to ours or that otherwise target indications that we are pursuing.

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Manufacturing

We currently rely on third-party manufacturers to supply the quantities of VBR, 3733 and 4334 used in our clinical 
and  nonclinical  studies.  We  currently  have  no  plans  to  establish  any  manufacturing  facilities  for  our  product 
candidates. 

Human Capital Management

Employees

As  of  December  31,  2021,  we  had  102  total  employees  and  contracts  with  a  number  of  temporary  contractors, 
consultants and contract research organizations. The majority of our employees work out of our facility in South San 
Francisco,  California.  We  also  have  a  small  number  of  remote  employees  spread  across  the  United  States,  two 
remote  employees  in  China  and  one  remote  employee  in  the  United  Kingdom.  Following  the  wind-down  of  our 
Microbiome program on January 31, 2021, we increased our headcount by adding eight additional employees. The 
new  employees  were  hired  to  support,  extend  and  grow  our  clinical  and  preclinical  pipeline,  with  new  hires  in 
clinical development and operations, research, manufacturing and general and administrative functions. 

We  expect  to  continue  to  add  employees  to  support  our  virology  programs  in  2022,  with  a  focus  on  continued 
expansion of our preclinical research team. We continually evaluate our needs and make strategic choices regarding 
whether to hire internal teams or outsource certain functions to contract research organizations (CROs) or contract 
manufacturing  organizations  (CMOs),  as  appropriate.  We  currently  outsource  our  clinical  study  management  to 
various CROs and utilize certain CMOs to manufacture both the drug substance and the drug product used in our 
ongoing and planned clinical studies.

We compete with both large and small companies in our industry for a limited number of qualified applicants to fill 
highly specialized needs. We generally target our base salaries and annual performance-based cash bonuses at the 
50th percentile of our peers and our long-term equity incentive compensation, which all employees receive, between 
the 50th and 75th percentiles of our peers. In certain circumstances, we offer compensation above these levels, based 
on  a  candidate’s  experience,  criticality,  amount  of  responsibility  and  either  individual  or  Company-wide 
performance. We routinely review our employees’ base salaries to ensure that they remain market competitive. Both 
annual  performance-based  cash  bonuses  and  long-term  equity  compensation  increase  as  a  percentage  of  total 
compensation based on employees’ levels of responsibility. We also offer comprehensive benefits packages to all of 
our  employees,  including:  100%  Company-covered  medical,  dental  and  vision  coverage  for  employees  and  their 
families;  a  401k  program  with  a  Company  match;  a  comprehensive  employee  assistance  program,  an  employee 
stock purchase plan; and paid family leave.

A large majority of our employees have advanced degrees, and we also offer an educational assistance program that 
reimburses  employees  up  to  a  maximum  amount  per  year  for  courses  that  directly  enhance  his  or  her  area  of 
professional work or contribute to his or her immediate career growth. This program demonstrates our commitment 
to analytical growth, enhanced knowledge and professional development.

COVID-19 Response

Shortly after the counties in the San Francisco Bay Area implemented a shelter-in-place order, followed quickly by 
California’s  similar  statewide  order,  we  established  a  COVID-19  Task  Force  (the  Task  Force)  that  held  regular 
meetings  through  mid-2021.  The  Task  Force,  in  conjunction  with  our  Human  Resources  department,  took  the 
following actions in our effort to curb the pandemic:

(cid:129) Drafting  and  distributing  comprehensive  COVID-19  office  and  exposure  policies,  and  lab  and  safety 
protocols,  each  of  which  have  been  modified  as  federal,  state  and  local  governments  have  updated  their 
guidance;

(cid:129)

(cid:129)

Implementing  a  vaccine  mandate  for  all  employees  as  well  as  any  third-party  individuals  entering  our 
facility;

Permitting all employees who are able to do so to work remotely;

(cid:129) Holding Company-wide virtual Town Hall meetings at least monthly to foster a sense of community given 

that the majority of our employees worked remotely;

18

(cid:129)

(cid:129)

(cid:129)

(cid:129)

Increasing cleaning protocols at U.S. office and lab facilities;

Providing  all  employees  with  cloth  face  coverings  and  filter  inserts  along  with  increasing  availability  of 
personal protective equipment to lab employees;

Prohibiting all work-related domestic and international travel; and

Following local requirements regarding mask wearing at our facility.

Since  the  cessation  of  Task  Force  meetings  in  mid-2021  due  to  the  widespread  availability  of  vaccines  and  then-
declining COVID case numbers, our human resources group and executive leadership team continued to regularly 
monitor all local and national guidelines and discuss and update internal guidance and protocols.

Corporate History

We  were  incorporated  in  Delaware  in  October  2005  under  the  name  South  Island  Biosciences,  Inc.  (which  was 
changed  to  Ventrus  Biosciences,  Inc.  in  April  2007).  On  July  11,  2014,  we  acquired  Assembly  Pharmaceuticals, 
Inc., a private company, through a merger with our wholly owned subsidiary (the Merger). In connection with the 
Merger, we changed our name from Ventrus Biosciences, Inc. to Assembly Biosciences, Inc.

Corporate Information

Our principal executive office is at 331 Oyster Point Blvd., Fourth Floor, South San Francisco, California 94080. 
Our telephone number is (833) 409-4583.

Available Information

Our  website  address  is  www.assemblybio.com.  We  routinely  post,  or  have  posted,  important  information  for 
investors  on  our  website  in  the  “Investors”  section.  We  use  this  website  as  a  means  of  disclosing  material 
information  in  compliance  with  our  disclosure  obligations  under  Regulation  FD.  Accordingly,  investors  should 
monitor the “Investors” section of our website, in addition to following our press releases, Securities and Exchange 
Commission (SEC) filings, presentations and webcasts. We make available free of charge through our website our 
press releases, Annual Reports on Form 10-K, Quarterly Reports on Form 10-Q, Current Reports on Form 8-K and 
all amendments to those reports as soon as reasonably practicable after electronically filed with or furnished to the 
SEC.

The  information  contained  on  our  website  is  not  a  part  of,  and  should  not  be  construed  as  being  incorporated  by 
reference, into this report.

The  reports  filed  with  the  SEC  by  us  and  by  our  officers,  directors  and  significant  shareholders  are  available  for 
review on the SEC’s website at www.sec.gov.

Item 1A. Risk Factors

You should carefully consider the following risk factors, together with all other information in this report, including 
our  consolidated  financial  statements  and  notes  thereto,  and  in  our  other  filings  with  the  SEC.  If  any  of  the 
following risks, or other risks not presently known to us or that we currently believe to not be material, develop into 
actual  events,  then  our  business,  financial  condition,  results  of  operations  or  prospects  could  be  materially 
adversely affected. If that happens, the market price of our common stock could decline, and stockholders may lose 
all or part of their investment.

Risks Related to Our Business

We have no approved products and depend on the future success of our HBV program. We cannot be certain that 
we  or  our  collaborators  will  be  able  to  obtain  regulatory  approval  for,  or  successfully  commercialize,  product 
candidates from our current pipeline or any other product candidates that we may subsequently identify, license 
or otherwise acquire.

We  and  our  collaborators  are  not  permitted  to  market  or  promote  any  product  candidates  in  the  United  States, 
Europe,  China  or  other  countries  before  we  receive  regulatory  approval  from  the  FDA  or  comparable  foreign 

19

regulatory authorities, and we may never receive such regulatory approval for our current product candidates. We 
have  not  submitted  a  new  drug  application  (NDA)  to  the  FDA  or  comparable  applications  to  other  regulatory 
authorities and do not expect to be in a position to do so in the near future.

All  of  our  product  candidates  are  in  clinical  development  or  in  varying  stages  of  nonclinical  development.  Data 
supporting  our  drug  discovery  and  nonclinical  and  clinical  development  programs  are  derived  from  laboratory 
studies,  nonclinical  studies  and  Phase  1  and  Phase  2  clinical  studies.  It  may  be  years  before  the  larger,  pivotal 
studies necessary to support regulatory approval of our current product candidates are completed, if ever. 

In addition to our current product pipeline, we may identify, license or otherwise acquire rights to other technologies 
or product candidates. Any such transactions would involve numerous risks, and we may be unsuccessful in entering 
into any such transactions or developing any such technologies or product candidates.

For these reasons, our drug discovery and development may not be successful, and we may be unable to continue 
clinical development of our product candidates and may not generate product approvals or product revenue, any of 
which could have a material adverse impact on our business, results of operations and financial condition. 

The COVID-19 pandemic may materially and adversely affect our business.

The  continued  spread  of  COVID-19,  including  through  infection  by  variants  of  the  SARS-CoV-2  virus,  could 
continue to adversely impact our research and development through delay, modification or suspension of our clinical 
and/or  nonclinical  studies.  Other  clinical-stage  biotechnology  companies,  like  us,  have  had  their  clinical  and 
nonclinical studies affected by the COVID-19 pandemic.

The  COVID-19  pandemic  has  and  may  continue  to:  (1)  impact  patient  enrollment,  retention  or  compliance  with 
clinical study protocols; (2) require modifications to, or deviations from, study protocols and procedures, such as the 
use of telehealth and home health visits instead of on-site monitoring and treatment, which could increase the cost 
of, and time for, conducting clinical studies; (3) disrupt or suspend the business operations of our third-party CROs, 
manufacturers  of  our  drug  candidates  and  the  clinical  sites  conducting  our  clinical  studies;  (4) delay  regulatory 
meetings and filings with regulatory agencies in the United States and other countries; and (5) disrupt supply chains 
and  cause  delays  of  shipments  of  critical  reagents,  PPE  and  disinfectants,  each  of  which  are  necessary  for  our 
laboratories and our CROs’ laboratories to maintain normal workflows. Even if we are able to collect timely clinical 
data  while  the  pandemic  is  ongoing,  COVID-19  may  negatively  affect  the  quality,  completeness,  integrity, 
interpretability and cost of obtaining such clinical study data. 

The  full  extent  of  the  pandemic’s  impact  on  our  business  will  depend  on  future  developments,  which  are  highly 
uncertain  and  cannot  be  predicted  with  confidence,  such  as  the  duration  and  severity  of  the  pandemic  and  the 
effectiveness of actions for containment, treatment and prevention of COVID-19. However, any COVID-19-related 
business  interruptions  or  delays  could  materially  and  adversely  affect  our  ability  to  conduct  our  research  and 
development activities in the manner and on the timelines presently planned as well as negatively affect the accuracy 
of our estimates regarding capital requirements, needs for additional financing and our ability to produce accurate 
and  timely  financial  statements.  Any  of  these  disruptions  could  have  a  material  adverse  impact  on  our  business, 
results of operations, financial condition and share price. 

As a result of the COVID-19 pandemic, governments around the world implemented significant measures to control 
the spread of the virus, including quarantines, travel restrictions, stay-at-home orders and business shutdowns. While 
governments  have  relaxed  these  measures  as  case  numbers  decreased,  surges  in  COVID-19  cases  have  prompted, 
and  may  in  the  future  prompt,  many  governments  to  reimplement  these  restrictions,  including  in  Europe  and  the 
United States. We continue to take precautionary measures intended to minimize our employees’ potential exposure 
to the virus, including temporarily requiring all employees who can do so to work remotely and suspending all non-
essential  business  travel  worldwide  for  our  employees  and  requiring  employees  to  be  fully  vaccinated  against 
COVID-19.  The  majority  of  our  employees  continuing  to  work  remotely  may  disrupt  our  operations,  increase  the 
risk of a cybersecurity incident or otherwise negatively affect our business.

In addition to the risks related to the COVID-19 pandemic discussed above, the uncertainty surrounding, and risks 
created  by,  the  pandemic  may  have  the  effect  of  heightening  many  of  the  other  risks  discussed  in  this  section 
impacting our operations.

20

We  are  not  currently  profitable  and  might  never  become  profitable,  and  we  will  need  additional  financing  to 
complete the development of any product candidates and fund our activities into the future.

We do not have any approved products, and we have a history of losses. We expect to continue to incur substantial 
operating and capital expenditures to advance our current product candidates through clinical development, continue 
research and discovery efforts to identify potential additional product candidates and seek regulatory approvals for 
our current and future product candidates. All operations and capital expenditures will be funded from cash on hand, 
securities  offerings  or  debt  financings  and  payments  we  may  receive  from  out-licensing,  collaborations  or  other 
strategic arrangements. However, there is no assurance that we will be successful in raising any necessary additional 
capital  on  terms  that  are  acceptable  to  us,  or  at  all.  If  we  are  unable  to  develop  and  commercialize  any  product 
candidates and generate sufficient revenue or raise capital, we could be forced to delay, scale back or discontinue 
product  development  and  clinical  studies,  sacrifice  attractive  business  opportunities,  cease  operations  entirely  and 
sell, or otherwise transfer, all or substantially all of our remaining assets, which would likely have a material adverse 
impact on our business, results of operations, financial condition and share price.

Nonclinical and clinical studies required for our product candidates are expensive and time-consuming and may 
fail to demonstrate the level of safety and efficacy necessary for product approval. 

Before we or any commercial partners can obtain FDA approval (or other foreign approvals) necessary to sell any of 
our product candidates, we must show that each potential product is safe and effective. To meet these requirements, 
we must conduct extensive nonclinical and sufficient, well-controlled clinical studies. 

The results of nonclinical studies may not be representative of disease behavior in a clinical setting and may not be 
predictive  of  the  outcomes  of  our  clinical  studies.  In  addition,  the  results  of  early  clinical  studies  of  product 
candidates may not be predictive of the results of later-stage clinical studies.

Conducting nonclinical and clinical studies is a lengthy, time consuming and expensive process. The length of time 
varies substantially according to the type, complexity, novelty, and intended use of the product candidate, and often 
can be several years or more. In addition, failure or delays can occur at any time during the nonclinical and clinical 
study process, resulting in additional operating expenses or harm to our business. 

The  commencement  and  rate  of  completion  of  clinical  studies  might  be  delayed  by  many  factors,  including,  for 
example:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

delays in reaching agreement with regulatory authorities on study design;

delays in reaching agreement on acceptable terms with prospective CROs and clinical study sites;

failure to demonstrate efficacy or the emergence of unforeseen safety issues;

insufficient quantities of qualified materials under cGMP for use in clinical studies due to manufacturing 
challenges, delays or interruptions in the supply chain;

slower  than  expected  rates  of  patient  recruitment  or  failure  to  recruit  a  sufficient  number  of  eligible 
patients,  which  may  be  due  to  a  number  of  reasons,  including  the  size  of  the  patient  population,  the 
proximity of patients to clinical sites, the eligibility criteria for the study, the design of the clinical study, 
and other potential drug candidates being studied;

delays in patients completing participation in a study or return for post-treatment follow-up for any reason, 
including, product side effects or disease progression;

(cid:129) modification of clinical study protocols;

(cid:129)

(cid:129)

delays, suspension, or termination of clinical studies by the institutional review board or ethics committee 
responsible for overseeing the study at a particular study site; and

government or other regulatory agency delays or clinical holds requiring suspension or termination of our 
clinical studies due to safety, tolerability or other issues related to our product candidates.

21

The failure of nonclinical and clinical studies to demonstrate safety and effectiveness of a product candidate for the 
desired indications, whether conducted by us or by a CRO, would harm the development of that product candidate 
and potentially other product candidates. This failure could cause us to abandon a product candidate and could delay 
development of other product candidates. Any delay in, or failure of, our nonclinical studies or clinical studies could 
delay,  or  preclude,  the  filing  of  our  NDAs  and  comparable  applications  with  the  FDA  and  foreign  regulatory 
agencies, as applicable, and materially harm our business, prospects, financial condition and results of operations.

We rely on CROs to conduct some of our nonclinical and clinical studies due to our lack of suitable facilities and 
resources.

We  do  not  have  sufficient  facilities  or  resources  to  conduct  all  of  our  anticipated  nonclinical  and  clinical  studies 
internally. As a result, we contract with CROs to conduct a significant portion of the nonclinical and clinical studies 
required for regulatory approval for our product candidates. Our reliance on CROs reduces our control over these 
activities but does not relieve us of our responsibilities. For example, we are responsible for ensuring that each of 
our studies is conducted in accordance with the applicable protocol, legal and regulatory requirements and scientific 
standards, including, in the case of clinical studies, good clinical practices, even if the study is conducted by a CRO. 
In the event CROs fail to perform their duties in such a fashion or we are unable to retain or continue with CROs on 
acceptable terms, we may be unable to complete our clinical studies and may fail to obtain regulatory approval for 
our product candidates.

Furthermore, these CROs may also have relationships with other entities, some of which may be our competitors. 
CRO personnel are not our employees, and except for remedies available to us under our agreements with such third 
parties, we cannot control whether they devote sufficient time and resources to our clinical and nonclinical studies. 
If the CROs do not successfully carry out their contractual duties or obligations or meet expected deadlines, if they 
need to be replaced or if the quality or accuracy of the clinical data they obtain is compromised due to the failure to 
adhere  to  our  clinical  protocols,  regulatory  requirements  or  for  other  reasons,  our  research,  nonclinical  or  clinical 
studies may be extended, delayed or terminated and we may not be able to obtain, or may be delayed in obtaining, 
regulatory  approvals  for  our  product  candidates,  any  of  which  could  materially  harm  our  business,  prospects, 
financial condition and results of operations.

Top-line or preliminary data may not accurately reflect the final results of a particular study.

We may publicly disclose top-line or preliminary data based on analysis of then-available efficacy, tolerability, PK 
and  safety  data,  and  the  results  and  related  findings  and  conclusions  are  subject  to  change  following  a  more 
comprehensive review of the data related to the particular study. We also make assumptions, estimates, calculations 
and  conclusions  as  part  of  our  data  analyses,  and  we  may  not  have  received  or  had  the  opportunity  to  fully  and 
carefully evaluate all data prior to release. As a result, the top-line or preliminary results that we report may differ 
from  final  results  of  the  same  studies  or  different  conclusions  or  considerations  may  qualify  such  results  once 
additional data have been received and fully evaluated. Top-line data also remains subject to audit and verification 
procedures  that  may  result  in  the  final  data  differing  materially  from  previously  published  preliminary  data.  As  a 
result, top-line and preliminary data should be viewed with caution until the final data are available.

In  addition  to  top-line  or  preliminary  results,  the  information  we  may  publicly  disclose  regarding  a  particular 
nonclinical  or  clinical  study  is  based  on  extensive  information,  and  you  or  others  may  not  agree  with  what  we 
determine  is  the  material  or  otherwise  appropriate  information  to  include  in  our  disclosure.  In  addition,  any 
information  we  determine  not  to  disclose  may  ultimately  be  deemed  significant  with  respect  to  future  decisions, 
conclusions, views, activities or otherwise regarding a particular drug, drug candidate or our business. If the top-line 
or  preliminary  data  that  we  report  differ  from  final  results,  or  if  others,  including  regulatory  authorities,  disagree 
with, or do not accept, the data or conclusions reached, our ability to obtain approval for, and commercialize, our 
product candidates may be harmed or delayed, which could harm our business, financial condition, operating results 
or prospects.

22

We  rely  on  third  parties  to  formulate  and  manufacture  our  product  candidates  and  products  that  we  study  in 
combination  with  our  product  candidates.  Our  use  of  third  parties  may  increase  the  risk  that  we  will  not  have 
sufficient quantities of our product candidates or other products on time or at an acceptable cost.

We  rely  on  third-party  manufacturers  to  supply  the  quantities  of  VBR,  3733  and  4334  used  in  our  clinical  and 
nonclinical studies. If any product candidate we develop or acquire in the future receives FDA or other regulatory 
approval, we expect to continue our reliance on one or more third-party contractors to manufacture our products. If, 
for  any  reason,  we  are  unable  to  rely  on  any  third-party  sources  we  have  identified  to  manufacture  our  product 
candidates,  we  would  need  to  identify  and  contract  with  additional  or  replacement  third-party  manufacturers  to 
manufacture compounds, drug substances and drug products for nonclinical, clinical and commercial purposes. We 
may be unsuccessful in identifying additional or replacement third-party manufacturers, or in negotiating acceptable 
terms  with  any  that  we  do  identify.  If  we  are  unable  to  establish  and  maintain  manufacturing  capacity,  the 
development and sales of our products and our financial performance may be materially and adversely affected.

We are exposed to the following risks with respect to the manufacture of our product candidates:

(cid:129) We  will  need  to  identify  manufacturers  for  commercial  supply  on  acceptable  terms,  which  we  may  be 
unable  to  do  because  the  number  of  potential  manufacturers  is  limited,  and  the  FDA  must  evaluate  and 
approve any new or replacement contractor. 

(cid:129) Any third-party manufacturers with whom we contract might be unable to formulate and manufacture our 
product  candidates  in  the  volume  and  quality  required  to  meet  our  clinical  and,  if  approved,  commercial 
needs in a timely manner.

(cid:129) Any third-party manufacturers with whom we contract might not perform as agreed or might not remain in 

the contract manufacturing business for the time required to supply our products.

(cid:129) One or more of any third-party manufacturers with whom we contract could be foreign, which increases the 

risk of shipping delays and adds the risk of import restrictions.

(cid:129) We do not have complete control over, and cannot ensure, any third-party manufacturers’ compliance with 
cGMP and other government regulations and corresponding foreign requirements, including periodic FDA 
and state regulatory inspections.

(cid:129) We  may  be  required  to  obtain  intellectual  property  rights  from  third  parties  to  manufacture  our  product 
candidates, and if any third-party manufacturer makes improvements in the manufacturing process for our 
product  candidates,  we  may  not  own,  or  may  have  to  share,  the  intellectual  property  rights  to  the 
innovation.

(cid:129) We  may  be  required  to  share  our  trade  secrets  and  know-how  with  third  parties,  increasing  risk  of 

misappropriation or disclosure of our intellectual property by or to third parties.

(cid:129) When  contracting  with  third-party  manufacturers,  we  might  compete  with  other  companies  for  access  to 
these manufacturers’ facilities and might be subject to manufacturing delays if the manufacturers give other 
clients higher priority than we are given.

Each of these risks could delay our development efforts, nonclinical studies and clinical studies or the approval, if 
any, of our product candidates by the FDA or applicable non-U.S. regulatory authorities and the commercialization 
of  our  product  candidates.  This  could  result  in  higher  costs  or  deprive  us  of  potential  product  revenues  and 
materially harm our business, financial condition and results of operations.

If  we  lose  key  management  personnel  and  cannot  recruit  and  retain  similarly  qualified  replacements,  our 
business may materially suffer.

We are highly dependent on the services of our executive officers. Our employment agreements with our executive 
officers do not ensure their retention. We do not currently maintain, nor do we intend to obtain in the future, “key 
person” life insurance that would compensate us in the event of the death or disability of any of the members of our 
management team. Our executive officers are critical to our success, and loss of any of these key employees could 
have a material adverse impact on our business, financial condition and results of operations.

23

The Fact Track Designation for VBR may not result in faster development, regulatory review or approval.

If nonclinical or clinical data demonstrate potential to address unmet medical needs for a serious or life-threatening 
condition,  the  sponsor  may  apply  for  FDA  Fast  Track  designation.  Fast  Track  designation  provides  increased 
opportunities  for  sponsor  meetings  with  the  FDA  during  nonclinical  and  clinical  development,  in  addition  to  the 
potential  for  rolling  review  once  a  marketing  application  is  filed.  VBR  has  received  Fast  Track  designation  for 
treatment  of  patients  with  chronic  HBV  infection.  However,  even  with  Fast  Track  designation,  we  may  not 
experience a faster development process, review or approval compared to conventional FDA procedures. Fast Track 
designation  does  not  assure  ultimate  approval  by  the  FDA.  The  FDA  may  withdraw  Fast  Track  designation  if  it 
believes  that  the  designation  is  no  longer  supported  by  data  from  our  product  development  program.  Any  such 
withdrawal could adversely affect our business.

We are dependent on an in-license relationship for VBR.

Our  license  agreement  with  IURTC  imposes  diligence  requirements  on  us  and  requires  us  to  make  milestone 
payments based upon the successful accomplishment of clinical and regulatory milestones related to VBR, royalty 
payments if VBR is approved and diligence maintenance fees. These payments will make it less profitable for us to 
develop VBR than if we owned the technology outright. In addition, if we breach any of our obligations under our 
license  agreement,  IURTC  may  have  a  right  to  terminate  the  license,  in  which  event  we  could  lose  our  rights  to 
VBR. 

Our collaboration partners might delay, prevent, or undermine the success of our product candidates.

Our  operating  and  financial  strategy  for  the  development,  nonclinical  and  clinical  testing,  manufacture,  and 
commercialization  of  drug  candidates  heavily  depends  on  collaborating  with  corporations,  academic  institutions, 
licensors,  licensees,  and  other  parties.  However,  there  can  be  no  assurance  that  we  will  successfully  establish  or 
maintain these collaborations. If a collaboration is terminated, replacement collaborators might not be available on 
attractive terms, or at all. 

The  activities  of  any  collaborator  will  not  be  within  our  control  and  might  not  be  within  our  power  to  influence. 
There can be no assurance that any collaborator will perform its obligations to our satisfaction or at all, that we will 
derive  any  revenue  or  profits  from  these  collaborations,  or  that  any  collaborator  will  not  compete  with  us.  If  any 
collaboration is unsuccessful, we might require substantially greater capital to undertake development and marketing 
of  our  proposed  products  and  might  not  be  able  to  develop  and  market  these  products  effectively,  if  at  all.  In 
addition,  a  lack  of  development  and  marketing  collaborations  might  lead  to  significant  delays  in  introducing 
proposed products into certain markets and/or reduced sales of proposed products in such markets.

We rely on data provided by third parties that has not been independently verified and could prove to be false, 
misleading, or incomplete.

We  rely  on  third-party  vendors,  scientists,  investigators  and  collaborators  to  provide  us  with  significant  data  and 
other  information  related  to  our  projects,  nonclinical  studies  and  clinical  studies,  and  our  business.  If  these  third 
parties provide inaccurate, misleading, or incomplete data, our business, prospects, and results of operations could 
be materially adversely affected.

Significant  disruptions  of  information  technology  systems  or  breaches  of  data  security  could  materially  and 
adversely affect our business, results of operations and financial condition.

We  collect  and  maintain  information  in  digital  form  and  are  increasingly  dependent  on  information  technology 
systems  and  infrastructure  to  operate  our  business.  In  the  ordinary  course  of  our  business,  we  collect,  store  and 
transmit large amounts of confidential information, including intellectual property, proprietary business information 
and personal information. It is critical that we do so in a secure manner to maintain the confidentiality and integrity 
of such confidential information. We have outsourced elements of our information technology infrastructure and, as 
a  result,  a  number  of  third-party  vendors  may  or  could  have  access  to  our  confidential  information.  Our  internal 
information technology systems and infrastructure, and those of our current and any future collaborators, contractors 
and consultants and other third parties on which we rely, are vulnerable to damage from computer viruses, malware, 
natural disasters, terrorism, war, telecommunication and electrical failures, cyberattacks or cyber intrusions over the 
Internet,  attachments  to  emails,  persons  inside  our  organization,  or  persons  with  access  to  systems  inside  our 
organization.

24

The risk of a security breach or disruption, particularly through cyberattacks or cyber intrusion, has escalated as the 
number, intensity and sophistication of attempted attacks and intrusions from around the world have increased. In 
addition, the prevalent use of mobile devices that access confidential information increases the risk of data security 
breaches, which could lead to the loss of confidential information or other intellectual property. The costs to us to 
mitigate network security problems, bugs, viruses, worms, malicious software programs and security vulnerabilities 
could  be  significant,  and  our  efforts  to  address  these  problems  may  not  be  successful.  If  unsuccessful,  these 
problems could cause interruptions, delays, cessation of service and other harm to our business and our competitive 
position, including material disruption of our product development programs. For example, any loss of clinical study 
data from completed or ongoing or planned clinical studies could result in delays in our regulatory approval efforts 
and significantly increase our costs to recover or reproduce the data.

If  a  computer  security  breach  affects  our  systems  or  results  in  the  unauthorized  release  of  personally  identifiable 
information,  our  reputation  could  be  materially  damaged.  In  addition,  such  a  breach  may  require  notification  to 
governmental agencies, the media or individuals pursuant to various federal, state and non-U.S. privacy and security 
laws, if applicable, including the Health Insurance Portability and Accountability Act of 1996 (HIPAA), as amended 
by the Health Information Technology for Clinical Health Act of 2009, and its implementing rules and regulations, 
as well as regulations promulgated by the Federal Trade Commission, state breach notification law and the General 
Data  Protection  Regulation  (GDPR)  in  the  European  Union  (EU).  We  would  also  be  exposed  to  a  risk  of  loss  or 
litigation  and  potential  liability,  which  could  materially  adversely  affect  our  business,  results  of  operations  and 
financial condition.

Research,  development  and  commercialization  goals  may  not  be  achieved  in  the  timeframes  that  we  publicly 
estimate, which could have an adverse impact on our business and could cause our stock price to decline.

We  set  goals,  and  make  public  statements  regarding  our  expectations,  regarding  the  timing  of  certain 
accomplishments, developments and milestones under our research and development programs. The actual timing of 
these events can vary significantly due to a number of factors, including, the amount of time, effort and resources 
committed to our programs by us and any collaborators and the uncertainties inherent in the clinical development 
and regulatory approval process. As a result, there can be no assurance that we or any collaborators will initiate or 
complete clinical development activities, make regulatory submissions or receive regulatory approvals as planned or 
that we or any collaborators will be able to adhere to our current schedule for the achievement of key milestones 
under any of our programs. If we or any collaborators fail to achieve one or more of the milestones as planned, our 
business could be materially adversely affected, and the price of our common stock could decline.

Developments by competitors might render our product candidates or technologies obsolete or non-competitive.

The pharmaceutical and biotechnology industries are intensely competitive. In addition, the clinical and commercial 
landscape  for  HBV  is  rapidly  changing;  we  expect  new  data  from  commercial  and  clinical-stage  products  to 
continue to emerge. We compete with organizations, some with significantly more resources, who are developing 
competitive product candidates. If our competitors develop effective treatments for HBV or any other indication or 
field  we  might  pursue,  and  successfully  commercialize  those  treatments,  our  business  and  prospects  could  be 
materially harmed.  

Other companies with core inhibitor products may produce negative clinical data, which would adversely affect 
public  and  clinical  communities’  perceptions  of  our  product  candidates,  and  may  negatively  impact  regulatory 
approval of, or demand for, our potential products.

Our HBV therapy research and development efforts involve therapeutics based on modulating forms of HBV core 
proteins with core inhibitors. Negative data from clinical studies using a competitor’s core inhibitors could adversely 
impact the perception of the therapeutic use of our product candidates and our ability to enroll patients in clinical 
studies. 

The  clinical  and  commercial  success  of  our  potential  products  will  depend  in  part  on  the  public  and  clinical 
communities’  acceptance  of  core  inhibitors,  a  novel  class  of  product  candidates.  Moreover,  our  success  depends 
upon  physicians  prescribing,  and  their  patients  being  willing  to  receive,  treatments  that  involve  the  use  of  core 
inhibitor product candidates we may develop in lieu of, or in addition to, existing treatments with which they are 
already  familiar  and  for  which  more  clinical  data  may  be  available.  Adverse  events  in  our  nonclinical  or  clinical 

25

studies  or  those  of  our  competitors  or  of  academic  researchers  utilizing  core  inhibitor  therapies,  even  if  not 
ultimately attributable to our product candidates, and any resulting publicity could result in increased governmental 
regulation,  unfavorable  public  perception,  potential  regulatory  delays  in  the  testing  or  approval  of  our  product 
candidates,  stricter  labeling  requirements  for  our  product  candidates  that  are  approved,  if  any,  and  a  decrease  in 
demand for any such products.

Risks Related to Our Regulatory and Legal Environment

We  are  and  will  be  subject  to  extensive  and  costly  government  regulation  and  the  failure  to  comply  with  these 
regulations may have a material adverse effect on our operations and business.

Our product candidates are subject to extensive and rigorous domestic government regulation including regulation 
by the FDA, the Centers for Medicare and Medicaid Services, other divisions of the U.S. Department of Health and 
Human  Services,  the  U.S.  Department  of  Justice,  state  and  local  governments,  and  their  respective  foreign 
equivalents.  Both  before  and  after  approval  of  any  product,  we  and  our  collaborators,  suppliers,  contract 
manufacturers  and  clinical  investigators  are  subject  to  extensive  regulation  by  governmental  authorities  in  the 
United  States  and  other  countries,  covering,  among  other  things,  testing,  manufacturing,  quality  control,  clinical 
studies,  post-marketing  studies,  labeling,  advertising,  promotion,  distribution,  import  and  export,  governmental 
pricing, price reporting and rebate requirements. Failure to comply with applicable requirements could result in one 
or  more  of  the  following  actions:  warning  or  untitled  letters;  unanticipated  expenditures;  delays  in  approval  or 
refusal  to  approve  a  product  candidate;  voluntary  or  mandatory  product  recall;  product  seizure;  interruption  of 
manufacturing or clinical studies; operating or marketing restrictions; injunctions; criminal prosecution and civil or 
criminal penalties including fines and other monetary penalties; exclusion from federal health care programs such as 
Medicare and Medicaid; adverse publicity; and disruptions to our business. 

If we or our collaborators obtain regulatory approval for a particular product, the approval might limit the intended 
medical uses for the product, limit our ability to promote, sell, and distribute the product, require that we conduct 
costly post-marketing surveillance, and/or require that we conduct ongoing post-marketing studies. Once obtained, 
any  approvals  might  be  withdrawn,  including,  for  example,  if  there  is  a  later  discovery  of  previously  unknown 
problems with the product, such as a previously unknown safety issue.

If we, our collaborators, or our contract manufacturers fail to comply with applicable regulatory requirements at any 
stage  during  the  regulatory  process,  such  noncompliance  could  result  in  delays  in  the  approval  of  applications  or 
supplements  to  approved  applications,  refusal  by  a  regulatory  authority  (including  the  FDA)  to  review  pending 
market  approval  applications  or  supplements  to  approved  applications,  untitled  letters  or  warning  letters,  fines, 
import and export restrictions, product recalls or seizures, injunctions, total or partial suspension of production, civil 
penalties,  withdrawals  of  previously  approved  marketing  applications,  recommendations  by  the  FDA  or  other 
regulatory authorities against governmental contracts, and/or criminal prosecutions.

The regulatory approval processes of the FDA and comparable foreign authorities are lengthy, time consuming 
and inherently unpredictable, and if we or our collaborators are ultimately unable to obtain regulatory approval 
for our product candidates, our business will be substantially harmed.

We,  or  any  current  or  future  collaborators,  cannot  assure  you  that  we  will  receive  the  approvals  necessary  to 
commercialize for sale any of our product candidates, or any product candidate we acquire or develop in the future. 
We  will  need  FDA  approval  to  commercialize  our  product  candidates  in  the  United  States  and  approvals  from 
applicable  regulatory  authorities  in  foreign  jurisdictions  to  commercialize  our  product  candidates  in  those 
jurisdictions. To obtain FDA approval of any product candidate, we must submit to the FDA an NDA demonstrating 
that the product candidate is safe and effective for its intended use. This requires significant research, nonclinical 
studies, and clinical studies. Satisfaction of the FDA’s regulatory requirements typically takes many years, depends 
upon  the  type,  complexity  and  novelty  of  the  product  candidate  and  requires  substantial  resources  for  research, 
development and testing. We cannot predict whether our research and clinical approaches will result in drugs that 
the  FDA  considers  safe  and  effective  for  their  indicated  uses.  The  FDA  has  substantial  discretion  in  the  approval 
process and might require us to conduct additional nonclinical and clinical testing, perform post-marketing studies 
or otherwise limit or impose conditions on any approval we obtain.

26

The  approval  process  might  also  be  delayed  by  changes  in  government  regulation,  future  legislation  or 
administrative  action  or  changes  in  FDA  policy  that  occur  prior  to  or  during  our  regulatory  review.  Delays  in 
obtaining regulatory approvals might: delay commercialization of, and our ability to derive product revenues from, 
our  product  candidates;  impose  costly  procedures  on  us;  and  diminish  any  competitive  advantages  that  we  might 
otherwise enjoy.

Even if we comply with all FDA requests, the FDA might ultimately reject one or more of our NDAs. We cannot be 
sure that we will ever obtain regulatory approval and commercialize any of our current or future product candidates. 
In foreign jurisdictions, we are subject to regulatory approval processes and risks similar to those associated with the 
FDA  described  above.  We  cannot  assure  you  that  we  will  receive  the  approvals  necessary  to  commercialize  our 
product candidates for sale outside the United States.

We and our collaborators may be subject, directly or indirectly, to applicable U.S. federal and state anti-kickback, 
false claims laws, physician payment transparency laws, fraud and abuse laws or similar healthcare and security 
laws  and  regulations,  and  health  information  privacy  and  security  laws,  which  could  expose  us  or  them  to 
criminal  sanctions,  civil  penalties,  contractual  damages,  reputational  harm  and  diminished  profits  and  future 
earnings.

Healthcare  providers,  physicians  and  others  play  a  primary  role  in  the  recommendation  and  prescription  of  any 
products for which we obtain regulatory approval. If we obtain FDA approval for any of our drug candidates and 
begin commercializing those drugs in the United States, our operations may be subject to various federal and state 
fraud  and  abuse  laws,  including  the  federal  Anti-Kickback  Statute,  the  federal  False  Claims  Act,  and  physician 
payment sunshine laws and regulations. Additionally, we are subject to state and non-U.S. equivalents of each of the 
healthcare laws described above, among others, some of which may be broader in scope and may apply regardless of 
the payor. These laws may impact, among other things, our proposed sales, marketing and education programs. In 
addition, we may be subject to patient privacy regulation by both the federal government and the states and foreign 
jurisdictions  in  which  we  conduct  our  business.  If  we  fail  to  comply  with  any  applicable  federal,  state  or  foreign 
legal requirement, we could be subject to penalties.

Regulators globally are imposing greater monetary fines for privacy violations. The GDPR applies to any company 
established in the EU as well as to those outside the EU if they collect and use personal data in connection with the 
offering goods or services to individuals in the EU or the monitoring of their behavior. The GDPR enhances data 
protection obligations for processors and controllers of personal data, including, for example, expanded disclosures 
about  how  personal  information  is  to  be  used,  limitations  on  retention  of  information,  mandatory  data  breach 
notification requirements and onerous new obligations on services providers. Noncompliance with the GDPR may 
result in monetary penalties of up to €20 million or 4% of worldwide revenue, whichever is higher. The GDPR may 
increase our responsibility and liability in relation to personal data that we process and we may be required to put in 
place  additional  mechanisms  to  ensure  compliance  with  the  GDPR,  including  as  implemented  by  individual 
countries.  Compliance  with  the  GDPR  and  other  changes  in  laws  or  regulations  associated  with  the  enhanced 
protection  of  certain  types  of  personal  data,  such  as  healthcare  data  or  other  sensitive  information,  could  greatly 
increase our cost of developing our products or even prevent us from offering certain products in jurisdictions that 
we may operate in. 

The California Consumer Privacy Act (CCPA) also created new individual privacy rights for California consumers 
(as defined in the law) and places increased privacy and security obligations on entities handling personal data of 
consumers or households. The CCPA requires covered companies to provide certain disclosures to consumers about 
its  data  collection,  use  and  sharing  practices,  and  to  provide  affected  California  residents  with  ways  to  opt-out  of 
certain  sales  or  transfers  of  personal  information.  While  there  is  currently  an  exception  for  protected  health 
information that is subject to HIPAA and clinical study regulations, as currently written, the CCPA may impact our 
business  activities.  The  uncertainty  surrounding  the  implementation  of  the  CCPA  exemplifies  the  vulnerability  of 
our business to the evolving regulatory environment related to personal data and protected health information.

Because of the breadth of these laws and the narrowness of the statutory exceptions and safe harbors available, it is 
possible that some of our business activities could be subject to challenge under one or more of such laws. 

Violations  of  these  laws  may  be  punishable  by  criminal  and/or  civil  sanctions,  including  penalties,  fines  and/or 
exclusion or suspension from federal and state healthcare programs such as Medicare and Medicaid and debarment 

27

from  contracting  with  the  U.S.  government.  In  addition,  private  individuals  have  the  ability  to  bring  actions  on 
behalf of the U.S. government under the federal False Claims Act as well as under the false claims laws of several 
states.

If any of the physicians or other providers or entities with whom we expect to do business with are found to be not 
in  compliance  with  applicable  laws,  they  may  be  subject  to  criminal,  civil  or  administrative  sanctions,  including 
exclusions from government funded healthcare programs, which may also adversely affect our business.

We face the risk of product liability claims and might not be able to obtain insurance.

Our business exposes us to the risk of product liability claims that are inherent in drug development. If the use of 
one or more of our product candidates or approved drugs, if any, harms people, we might be subject to costly and 
damaging product liability claims brought against us by clinical study participants, consumers, health care providers, 
pharmaceutical companies or others selling our products. Our inability to obtain sufficient product liability/clinical 
study insurance at an acceptable cost to protect against potential product liability claims could prevent or inhibit the 
commercialization  of  pharmaceutical  products  we  develop.  We  cannot  predict  all  of  the  possible  harms  or  side 
effects  that  might  result  and,  therefore,  the  amount  of  insurance  coverage  we  maintain  might  not  be  adequate  to 
cover all liabilities we might incur. If we are unable to obtain insurance at an acceptable cost or otherwise protect 
against  potential  product  liability  claims,  we  will  be  exposed  to  significant  liabilities,  which  might  materially  and 
adversely affect our business and financial position. If we are sued for any injury allegedly caused by our products, 
our  liability  could  exceed  our  total  assets  and  our  ability  to  pay.  Any  successful  product  liability  claims  brought 
against us would decrease our cash and may adversely affect our business, stock price and financial condition.

We might be exposed to liability claims associated with the use of hazardous materials and chemicals.

Our research, development and manufacturing activities and/or those of our third-party contractors might involve the 
controlled  use  of  hazardous  materials  and  chemicals.  Although  we  will  strive  to  have  our  safety  procedures,  and 
those of our contractors, comply with federal, state and local laws and regulations for using, storing, handling and 
disposing  of  these  materials,  we  cannot  completely  eliminate  the  risk  of  accidental  injury  or  contamination  from 
these materials. In the event of such an accident, we could be held liable for any resulting damages, and any liability 
could  materially  and  adversely  affect  our  business,  financial  condition  and  results  of  operations.  In  addition,  the 
federal,  state  and  local  laws  and  regulations  governing  the  use,  manufacture,  storage,  handling  and  disposal  of 
hazardous  or  radioactive  materials  and  waste  products  might  require  us  to  incur  substantial  compliance  costs  that 
could  materially  and  adversely  affect  our  business,  financial  condition  and  results  of  operations.  We  do  not  carry 
hazardous  materials  liability  insurance.  We  intend  to  obtain  such  insurance  in  the  future,  if  necessary,  but  cannot 
give assurance that we will obtain such coverage.

Our  employees,  independent  contractors,  consultants,  collaborators  and  CROs  may  engage  in  misconduct  or 
other  improper  activities,  including  noncompliance  with  regulatory  standards  and  requirements,  which  could 
result in significant liability for us and harm our reputation.

We are exposed to the risk of fraud or other misconduct, including failure to:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

comply with applicable regulations of, and provide accurate information to, the FDA or comparable foreign 
regulatory authorities;

comply  with  federal  and  state  healthcare  fraud  and  abuse  laws  and  regulations  and  similar  laws  and 
regulations established and enforced by comparable foreign regulatory authorities;

comply with the United States Foreign Corrupt Practices Act (the FCPA), the U.K. Bribery Act 2010, the 
PRC Criminal Law, the PRC Anti-unfair Competition Law and other anti-bribery and trade laws;

report financial information and data accurately; or

disclose unauthorized activities.

28

Misconduct could also involve the improper use or misrepresentation of information obtained during clinical studies, 
creating fraudulent data in our nonclinical studies or clinical studies or illegal misappropriation of product materials, 
which could result in regulatory sanctions, delays in clinical studies, or serious harm to our reputation. 

It is not always possible to identify and deter misconduct. The precautions we take to detect and prevent this activity 
may not be effective in controlling unknown or unmanaged risks or losses or in protecting us from governmental 
investigations  or  other  actions  or  lawsuits  stemming  from  a  failure  to  comply  with  such  laws  or  regulations. 
Additionally, we are subject to the risk that a person or government could allege such fraud or other misconduct, 
even if none occurred. If any such actions are instituted against us and we are not successful in defending ourselves 
or  asserting  our  rights,  those  actions  could  harm  our  business,  results  of  operations,  financial  condition  and  cash 
flows, including through the imposition of significant fines or other sanctions.

We have international operations, including in China, and conduct clinical studies outside of the United States, 
including planned studies in Eastern Europe. A number of risks associated with international operations could 
materially and adversely affect our business.

We  expect  to  be  subject  to  a  number  of  risks  related  with  our  international  operations,  many  of  which  may  be 
beyond our control. These risks include:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

different regulatory requirements for drug approvals in foreign countries;

different  standards  of  care  in  various  countries  that  could  complicate  the  evaluation  of  our  product 
candidates;

different U.S. and foreign drug import and export rules;

different reimbursement systems and different competitive drugs indicated to treat the indication for which 
our product candidates are being developed;

reduced protection for intellectual property rights in certain countries;

unexpected changes in tariffs, trade barriers and regulatory requirements;

compliance with the FCPA and other anti-corruption and anti-bribery laws;

compliance with tax, employment, immigration and labor laws for employees living or traveling abroad;

foreign taxes, including withholding of payroll taxes;

foreign currency fluctuations and compliance with foreign currency exchange rules, which could result in 
increased  operating  expenses  and  reduced  revenues,  and  other  obligations  incident  to  doing  business  in 
another country; and

business  interruptions  resulting  from  geopolitical  actions,  including  tariffs,  war  and  terrorism,  natural 
disasters or outbreaks of disease.

Risks Related to Our Intellectual Property

Our business depends on protecting our intellectual property.

If we and our licensors do not obtain protection for our respective intellectual property rights, our competitors might 
be  able  to  take  advantage  of  our  research  and  development  efforts  to  develop  competing  drugs.  Our  success, 
competitive position and future revenues, if any, depend in part on our ability and the abilities of our licensors to 
obtain and maintain patent protection for our products, methods, processes and other technologies, to preserve our 
trade secrets, to prevent third parties from infringing on our proprietary rights and to operate without infringing the 
proprietary rights of third parties.

We  rely  upon  a  combination  of  patents,  trade  secret  protection  and  contractual  arrangements  to  protect  the 
intellectual  property  related  to  our  technologies.  We  will  only  be  able  to  protect  our  products  and  proprietary 

29

information  and  technology  by  preventing  unauthorized  use  by  third  parties  to  the  extent  that  our  patents,  trade 
secrets, and contractual position allow us to do so. We cannot be certain that we will secure any rights to any issued 
patents with claims that cover any of our proprietary product candidates and technologies. The patent prosecution 
process  is  expensive  and  time-consuming,  and  we  may  be  unable  to  file  and  prosecute  all  necessary  or  desirable 
patent applications at a reasonable cost or in a timely manner. We could fail to identify patentable aspects of our 
research  and  development  output  before  it  is  too  late  to  obtain  patent  protection  or  before  our  competitors  secure 
patents covering such discoveries. The patent process also is subject to numerous risks and uncertainties, and there 
can be no assurance that we will be successful in protecting our products by obtaining and defending patents.

Composition-of-matter  patents  relating  to  the  active  pharmaceutical  ingredient  are  generally  considered  to  be  the 
strongest form of intellectual property protection for pharmaceutical products. Such patents provide protection not 
limited to any one method of use. Method-of-use patents protect the use of a product for the specified method(s) and 
do not prevent a competitor from making and marketing a product that is identical to our product for an indication 
that is outside the scope of the patented method. We rely on a combination of these and other types of patents to 
protect our product candidates, and there can be no assurance that our intellectual property will create and sustain 
the competitive position of our product candidates.

Biotechnology  and  pharmaceutical  product  patents  involve  highly  complex  legal  and  scientific  questions.  Any 
patent  applications  that  we  own  or  license  may  fail  to  result  in  issued  patents.  In  addition,  the  U.S.  Patent  and 
Trademark Office (USPTO) and patent offices in other jurisdictions often require that patent applications concerning 
pharmaceutical  and/or  biotechnology-related  inventions  are  limited  or  narrowed  substantially  to  cover  only  the 
specific  innovations  exemplified  in  the  patent  application,  thereby  limiting  the  scope  of  protection  against 
competitive  challenges.  As  a  result,  even  if  we  or  our  licensors  obtain  patents,  the  patents  might  be  substantially 
narrower than anticipated. 

If  patents  do  successfully  issue  from  our  applications,  third  parties  may  challenge  their  validity  or  enforceability, 
which may result in such patents being narrowed, invalidated, or held unenforceable. Even if our patents and patent 
applications are not challenged by third parties, those patents and patent applications may not prevent others from 
designing around our claims and may not otherwise adequately protect our product candidates. 

Patent and other intellectual property protection is crucial to the success of our business and prospects, and there is a 
substantial  risk  that  such  protections,  if  obtained,  will  prove  inadequate.  The  legal  systems  of  certain  countries, 
including China, do not always favor the enforcement of patents, trade secrets, and other intellectual property rights, 
particularly those relating to pharmaceutical and biotechnology products, which could make it difficult for us to stop 
infringement of our patents, misappropriation of our trade secrets, or marketing of competing products in violation 
of our proprietary rights. 

Beyond the protection afforded by patents, we seek to rely on trade secret protection and confidentiality agreements 
to  protect  proprietary  know-how,  information,  or  technology  that  is  not  covered  by  our  patents.  Although  our 
agreements  require  all  of  our  employees  to  assign  their  inventions  to  us,  and  we  require  all  of  our  employees, 
consultants,  advisors,  collaborators,  contractors  and  any  third  parties  who  have  access  to  our  trade  secrets, 
proprietary  know-how  and  other  confidential  information  and  technology  to  enter  into  appropriate  confidentiality 
agreements,  we  cannot  be  certain  that  our  trade  secrets,  proprietary  know-how  and  other  confidential  information 
and technology will not be subject to unauthorized disclosure or that our competitors will not otherwise gain access 
to or independently develop substantially equivalent trade secrets, proprietary know-how and other information and 
technology. If we are unable to prevent unauthorized disclosure of our intellectual property related to our product 
candidates and technology to third parties, we may not be able to establish or maintain a competitive advantage in 
our market, which could materially adversely affect our business and operations.

We  may  incur  substantial  costs  as  a  result  of  litigation  or  other  proceedings  relating  to  our  patents  and  other 
intellectual property rights.

We  may  in  the  future  be  involved  in  legal  or  administrative  proceedings  involving  our  intellectual  property, 
including infringement of our intellectual property by third parties. These lawsuits or proceedings likely would be 
expensive, consume time and resources and divert the attention of managerial and scientific personnel, even if we 
were successful in stopping the infringement of such patents. There is a risk that these proceedings will decide that 
such  patents  or  other  intellectual  property  rights  are  not  valid  and  that  we  do  not  have  the  right  to  stop  the  other 

30

party from using our inventions. There is also the risk that, even if the validity of such patents is upheld, the court or 
administrative  agency  will  refuse  to  stop  the  other  party  on  the  ground  that  such  other  party’s  activities  do  not 
infringe our rights to such patents. If we were not successful in defending our intellectual property, our competitors 
could develop and market products based on our discoveries, which may reduce demand for our products.

We may infringe the intellectual property rights of others, which may prevent or delay our product development 
efforts and stop us from commercializing or increase the costs of commercializing our product candidates.

Our success will depend in part on our ability to operate without infringing the proprietary rights of third parties. 
Our competitors may have filed, and may in the future file, patent applications covering products and technologies 
similar  to  ours.  Any  such  patent  application  may  have  priority  over  our  patent  applications,  which  could  further 
require us to obtain rights from third parties to issued patents covering such products and technologies. We cannot 
guarantee that the manufacture, use or marketing of any product candidates that we develop will not infringe third-
party patents.

If a patent infringement suit were brought against us, we may be forced to stop or delay developing, manufacturing, 
or selling potential products that are claimed to infringe a third party’s intellectual property, unless that third party 
grants us rights to use its intellectual property. In such cases, we may be required to obtain licenses to patents or 
proprietary rights of others to continue development, manufacture or sale of our products. If we are unable to obtain 
a license or develop or obtain non-infringing technology, or if we fail to defend an infringement action successfully, 
or if we are found to have infringed a valid patent, we may incur substantial costs and monetary damages, encounter 
significant delays in bringing our product candidates to market and be precluded from manufacturing or selling our 
product candidates, any of which could harm our business significantly.

The cost of maintaining our patent protection globally is high and requires continuous review and compliance. 
We may not be able to effectively maintain our intellectual property position throughout the major markets of the 
world.

The  USPTO  and  foreign  patent  authorities  require  maintenance  fees,  payments  and  continued  compliance  with  a 
number of procedural and documentary requirements. Noncompliance may result in abandonment or lapse of patents 
or patent applications and a partial or complete loss of patent rights in the relevant jurisdiction. Such a loss could 
reduce royalty payments for lack of patent coverage from our collaboration partners or may result in competition, 
either of which could have a material adverse effect on our business.

We  have  made,  and  will  continue  to  make,  certain  strategic  decisions  in  balancing  the  costs  and  the  potential 
protections afforded by the patent laws of certain countries. As a result, we may not be able to prevent third parties 
from practicing our inventions in all countries, or from selling or importing products made using our inventions in 
and into the United States or other countries. Third parties may use our technologies in territories in which we have 
not  obtained  patent  protection  to  develop  their  own  products  and  may  infringe  our  patents  in  territories  which 
provide inadequate enforcement mechanisms. Such third-party products may compete with our product candidates, 
and  our  patents  or  other  intellectual  property  rights  may  not  be  effective  or  sufficient  to  prevent  them  from 
competing. Such competition could materially and adversely affect our business and financial condition.

Intellectual property rights do not address all potential threats to any competitive advantage we may have.

The degree of future protection afforded by our intellectual property rights is uncertain because intellectual property 
rights  have  limitations,  and  intellectual  property  rights  may  not  adequately  protect  our  business  or  permit  us  to 
maintain our competitive advantage. The following examples are illustrative:

(cid:129) Others may be able to make compounds that are the same as, or similar to, our current or future product 
candidates but that are not covered by the claims of the patents that we own or have exclusively licensed.

(cid:129) We  or  any  of  our  licensors  or  strategic  partners  might  not  have  been  the  first  to  make  the  inventions 
covered by the issued patents or pending patent applications that we own or have exclusively licensed.

(cid:129) We  or  any  of  our  licensors  or  strategic  partners  might  not  have  been  the  first  to  file  patent  applications 

covering certain of our inventions.

31

(cid:129) Others may independently develop similar or alternative technologies or duplicate any of our technologies 

without infringing our intellectual property rights.

(cid:129)

The prosecution of our pending patent applications may not result in granted patents.

(cid:129) Granted  patents  that  we  own  or  have  exclusively  licensed  may  not  provide  us  with  any  competitive 

advantages, or may be held invalid or unenforceable, because of legal challenges by our competitors.

(cid:129)

Patent protection on our product candidates may expire before we are able to develop and commercialize 
the product, or before we are able to recover our investment in the product.

(cid:129) Our competitors might conduct research and development activities in the United States and other countries 
that  provide  a  safe  harbor  from  patent  infringement  claims  for  such  activities,  as  well  as  in  countries  in 
which  we  do  not  have  patent  rights  and  may  then  use  the  information  learned  from  such  activities  to 
develop competitive products for sale in markets where we intend to market our product candidates.

The  existence  of  counterfeit  pharmaceutical  products  in  pharmaceutical  markets  may  damage  our  brand  and 
reputation and have a material adverse effect on our business, operations and prospects.

Counterfeit products, including counterfeit pharmaceutical products, are a significant problem, particularly in China. 
Counterfeit  pharmaceuticals  are  products  sold  or  used  for  research  under  the  same  or  similar  names,  or  similar 
mechanism of action or product class, but which are sold without proper licenses or approvals. The proliferation of 
counterfeit pharmaceuticals has grown in recent years and may continue to grow in the future. Such products may be 
used for indications or purposes that are not recommended or approved or for which there is no data or inadequate 
data with regard to safety or efficacy. Such products divert sales from genuine products, often are of lower cost and 
lower  quality  (having  different  ingredients  or  formulations,  for  example),  and  have  the  potential  to  damage  the 
reputation for quality and effectiveness of the genuine product. 

If  counterfeit  pharmaceuticals  illegally  sold  or  used  for  research  result  in  adverse  events  or  side  effects  to 
consumers, we may be associated with any negative publicity resulting from such incidents. In addition, counterfeit 
products could be used in nonclinical studies or clinical studies or could otherwise produce undesirable side effects 
or adverse events that may be attributed to our products as well, which could cause us or regulatory authorities to 
interrupt, delay or halt clinical studies and could result in the delay or denial of regulatory approval by the FDA or 
other regulatory authorities and potential product liability claims.  

In China, although the government has increased the lower and upper limits on penalties on producers of counterfeit 
and  substandard  pharmaceuticals,  these  penalties  have  not  eliminated  counterfeit  pharmaceuticals.  As  a  result,  we 
may be unable to prevent third parties from selling or purporting to sell our products in China. The existence of, and 
any  increase  in,  the  sales  and  production  of  counterfeit  pharmaceuticals,  or  the  technological  capabilities  of 
counterfeiters, could negatively impact our revenues, brand reputation, business and results of operations.

Risks Related to Our Common Stock

Our amended and restated bylaws provide that the Court of Chancery of the State of Delaware will be the sole 
and exclusive forum for certain types of actions and proceedings that may be initiated by our stockholders, which 
could limit our stockholders’ ability to bring a claim in a judicial forum they find favorable for disputes with us 
or our directors, officers or other employees.

Our amended and restated bylaws provide that, with certain limited exceptions, unless we consent to the selection of 
an  alternative  forum,  the  Court  of  Chancery  of  the  State  of  Delaware  is  the  sole  and  exclusive  forum  for  (1)  any 
derivative action or proceeding brought on our behalf; (2) any action asserting a claim of breach of fiduciary duty 
owed  by  any  of  our  current  or  former  directors,  officers  or  other  employees  to  us  or  to  our  stockholders;  (3)  any 
action  asserting  a  claim  arising  pursuant  to  the  Delaware  General  Corporation  Law,  or  our  certificate  of 
incorporation or bylaws (as each may be amended from time to time); or (4) any action asserting a claim governed 
by  the  internal  affairs  doctrine.  Alternatively,  if  such  court  does  not  have  jurisdiction,  the  Superior  Court  of 
Delaware,  or,  if  such  other  court  does  not  have  jurisdiction,  the  United  States  District  Court  for  the  District  of 
Delaware,  will  be  the  sole  and  exclusive  forum  for  such  actions  and  proceedings.  The  choice  of  forum  provision 

32

may limit a stockholder’s ability to bring a claim in a judicial forum that it finds favorable for disputes with us or 
our  directors,  officers,  or  other  employees,  which  may  discourage  such  lawsuits  against  us  and  our  directors, 
officers, and other employees. Alternatively, if a court were to find the choice of forum provision contained in our 
amended  and  restated  bylaws  to  be  inapplicable  or  unenforceable  in  an  action,  we  may  incur  additional  costs 
associated  with  resolving  such  action  in  other  jurisdictions,  which  could  have  a  material  adverse  impact  on  our 
business. The choice of forum provision in our amended and restated bylaws will not preclude or contract the scope 
of  exclusive  federal  or  concurrent  jurisdiction  for  actions  brought  under  the  federal  securities  laws,  including  the 
Exchange Act or the Securities Act, or the respective rules and regulations promulgated thereunder.

The price of our common stock might fluctuate significantly, and you could lose all or part of your investment.

The  price  of  our  common  stock  fluctuates  widely.  Continued  volatility  in  the  market  price  of  our  common  stock 
might prevent a stockholder from being able to sell shares of our common stock at or above the price paid for such 
shares. The trading price of our common stock may continue to be volatile and subject to wide price fluctuations in 
response to various factors, many of which are beyond our control, such as the progress, results and timing of our 
clinical  and  nonclinical  studies  and  other  studies  involving  our  product  candidates,  the  success  or  failure  of  our 
product candidates, the receipt or loss of required regulatory approvals for our product candidates, the availability of 
capital or the other risks discussed in this “Risk Factors” section. 

33

Item 1B. Unresolved Staff Comments

None.

Item 2. Properties

We  lease  office  space  for  corporate  and  administrative  functions  and  laboratory  space  in  South  San  Francisco, 
California  under  a  sub-sublease  that  expires  in  December  2023.  We  also  lease  office  space  that  was  used  for 
administrative functions in Carmel, Indiana under a lease agreement that expires in August 2023. In February 2021, 
we subleased substantially all of the office space under the lease in Carmel, Indiana for the remainder of its term. 
Our China subsidiary leases registrational offices in Shanghai and Beijing under leases that expire in May 2022 and 
October 2022, respectively.

We believe these leased facilities are adequate for our current needs and that additional space will be available in the 
future on commercially reasonable terms as needed.

Item 3. Legal Proceedings

We are not a party to any material legal proceedings at this time. From time to time, we may be subject to various 
legal  proceedings  and  claims  that  arise  in  the  ordinary  course  of  our  business  activities.  Although  the  results  of 
litigation and claims cannot be predicted with certainty, we do not believe we are party to any claim or litigation the 
outcome of which, if determined adversely to us, would individually or in the aggregate be reasonably expected to 
have a material adverse effect on our business. Regardless of the outcome, litigation can have an adverse effect on 
us because of defense and settlement costs, diversion of management resources and other factors.

Item 4. Mine Safety Disclosures

Not applicable.

34

PART II

Item  5.  Market  for  Registrant’s  Common  Equity,  Related  Stockholder  Matters  and  Issuer  Purchases  of 
Equity Securities

Market Information for Common Stock

Our common stock is traded under the symbol “ASMB” and is quoted on The Nasdaq Global Select Market.

Holders of Record

As of February 28, 2022, there were 66 stockholders of record, which excludes stockholders whose shares were held 
in nominee or street name by brokers.

Dividend Policy

We have never declared or paid any dividends and do not anticipate paying any dividends on our common stock in 
the foreseeable future.

Securities Authorized for Issuance Under Equity Compensation Plans

The  following  table  sets  forth  the  indicated  information  as  of  December  31,  2021  with  respect  to  our  equity 
compensation plans.

Number of
securities
to be issued
upon
exercise of
outstanding
options,
warrants
and rights
(a)

Weighted
average
exercise
price of
outstanding
options,
warrants
and
rights(1)
(b)

Number of
securities
remaining
available for
future
issuance
under equity
compensation
plans
(excluding
securities
reflected in
column (a))
(c)
5,114,258  (3)

Plan Category
Equity compensation plans approved by securityholders .............     5,271,260  (2)   $

10.47     

Equity compensation plans not approved by securityholders .......     1,860,980  (4)   $
Total ..............................................................................................     7,132,240   

14.98     

203,248  (5)

5,317,506   

(1) The weighted average exercise price is calculated solely based on the exercise prices of the outstanding stock 
options and does not reflect the shares that will be issued upon the vesting of outstanding awards of restricted 
stock units (RSUs), which have no exercise price.

(2) This  number  includes  the  following:  278,369  shares  subject  to  stock  options  granted  under  the  2010  Equity 
Incentive  Plan  (2010  Plan);  1,751,322  shares  subject  to  outstanding  awards  granted  under  the  Assembly 
Biosciences,  Inc.  Amended  and  Restated  2014  Stock  Incentive  Plan  (2014  Plan),  of  which  1,743,308  were 
subject to outstanding stock options and 8,014 were subject to outstanding RSUs; 2,788,966 shares subject to 
outstanding awards granted under the Assembly Biosciences, Inc. 2018 Stock Incentive Plan, as amended (2018 
Plan), of which 1,891,756 were subject to outstanding stock options, 883,575 were subject to outstanding RSUs 
and 13,635 are underlying stock appreciation rights (which are not included in column (a) but are reflected in 
column  (c));  and  466,238  options  assumed  by  us  in  connection  with  our  merger  with  Assembly 
Pharmaceuticals.  This  number  excludes  purchase  rights  currently  accruing  under  the  Assembly  Biosciences, 
Inc. Amended and Restated 2018 Employee Stock Purchase Plan (2018 ESPP).

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(3) This  number  includes:  no  shares  under  the  2010  Plan,  which  has  been  frozen;  733,295  shares  available  for 
issuance  under  the  2014  Plan;  3,337,448  shares  available  for  issuance  under  the  2018  Plan;  and  1,043,515 
shares  reserved  for  issuance  under  the  2018  ESPP.  As  of  February  28,  2022,  assuming  each  participant 
purchases  the  maximum  number  of  shares  in  the  current  offering  period,  no  more  than  155,000  shares  are 
subject to purchase in the current offering, which ends on May 13, 2022.

(4) This number includes 596,690 shares subject to outstanding awards granted under the 2017 Inducement Award 
Plan  (2017  Inducement  Plan),  of  which  589,190  were  subject  to  outstanding  stock  options  and  7,500  were 
subject to outstanding RSUs; 500,000 shares subject to stock options granted under the 2019 Inducement Award 
Plan  (2019  Inducement  Plan);  and  764,290  shares  subject  to  outstanding  awards  granted  under  the  2020 
Inducement Award Plan (2020 Inducement Plan), of which 693,040 were subject to outstanding stock options 
and 71,250 were subject to outstanding RSUs.

(5) This number includes: 191,288 shares available for issuance under the 2017 Inducement Plan, no shares under 

the 2019 Inducement Plan and 11,960 shares available for issuance under the 2020 Inducement Plan.

Our  stockholder-approved  equity  compensation  plans  consist  of  the  2018  Plan,  2014  Plan,  the  2010  Plan,  stock 
options assumed in our merger with Assembly Pharmaceuticals and the 2018 ESPP. Effective on June 2, 2016, the 
2010 Plan was frozen, and no further grants will be made under the 2010 Plan. Shares that are forfeited under the 
2010 Plan on or after June 2, 2016 will become available for issuance under the 2014 Plan. An “Award” under the 
2018  Plan,  2014  Plan  or  2010  Plan  is  any  right  to  receive  our  common  stock  consisting  of  non-statutory  stock 
options, incentive stock options, stock appreciation rights, RSUs, or any other stock award.

In  May  2018,  our  stockholders  approved  the  2018  ESPP  and  was  amended  and  restated  in  May  2021.  The  2018 
ESPP provides for the purchase by employees of up to an aggregate of 1,300,000 shares of the Company’s common 
stock. Eligible employees can purchase shares of our common stock at the end of a predetermined offering period at 
85% of the lower of the fair market value at the beginning or end of the offering period.

Our outstanding equity compensation arrangements that have not been approved by our stockholders consist of the 
2017  Inducement  Plan,  the  2019  Inducement  Plan  and  the  2020  Inducement  Plan.  In  April  2017,  our  board  of 
directors adopted the 2017 Inducement Plan and reserved 800,000 shares of our common stock for issuance under 
2017 the Inducement Plan. In August 2019, our board of directors adopted the 2019 Inducement Plan and reserved 
500,000  shares  of  our  common  stock  for  issuance  under  the  2019  Inducement  Plan.  In  March  2020,  our  board  of 
directors adopted the 2020 Inducement Plan and reserved 800,000 shares of our common stock for issuance under 
the  2020  Inducement  Plan.  The  only  persons  eligible  to  receive  grants  of  awards  under  the  either  the  2017 
Inducement Plan, the 2019 Inducement Plan or the 2020 Inducement Plan are individuals who satisfy the standards 
for inducement grants under Nasdaq Marketplace Rule 5635(c)(4) and the related guidance under Nasdaq IM 5635-
1-that is, generally, a person not previously an employee or director of ours, or following a bona fide period of non-
employment, as an inducement material to the individual's entering into employment with us. An “Award” is any 
right to receive our common stock pursuant to the Inducement Plan, consisting of nonstatutory stock options, stock 
appreciation rights, restricted stock awards, RSUs, or any other stock award.

Recent Sales of Unregistered Securities

There were no unregistered sales of equity securities in 2021.

Purchases of Equity Securities by the Issuer and Affiliated Purchasers

We  did  not  purchase  any  of  our  registered  equity  securities  during  the  period  covered  by  this  Annual  Report  on 
Form 10-K.

36

Item 6. [Reserved]

37

Item 7. Management’s Discussion and Analysis of Financial Condition and Results of Operation

The  following  discussion  and  analysis  of  our  financial  condition  and  results  of  operations  should  be  read  in 
conjunction with our consolidated financial statements and the related notes thereto and other financial information 
appearing  elsewhere  in  this  Annual  Report  on  Form  10-K.  The  following  discussion  contains  forward-looking 
statements that involve risks and uncertainties. Our actual results could differ materially from those expressed or 
implied in any forward-looking statements as a result of various factors, including those set forth in this Form 10-K 
under “Item 1A. Risk Factors.”

Overview

We are a clinical-stage biotechnology company focused on discovery and development of innovative therapeutics 
targeting hepatitis B virus (HBV) and other viral diseases. 

The World Health Organization (WHO) estimates that 296 million people worldwide are chronically infected with 
HBV  as  of  2019.  Our  research  and  development  organizations  are  pursuing  multiple  drug  candidates  designed  to 
inhibit the HBV replication cycle and block the generation of covalently closed circular DNA (cccDNA), with the 
aim of discovering and developing finite and curative therapies for patients with chronic HBV infection. We have 
discovered several novel core inhibitors, which are small molecules that directly target and allosterically modulate 
the HBV core protein in a way that affects assembly and stability of HBV nucleocapsids. In addition, our research 
organization is working on discovering and developing cccDNA disruptors and small molecules targeting two novel 
undisclosed HBV targets,

While we continue our efforts to develop finite and curative therapies for patients with chronic HBV infection, our 
research  organization  recently  launched  an  exploratory  virology  discovery  program  for  compounds  directed  at  a 
number of non-HBV viral targets. These targets, currently expected to be disclosed in mid-2022, were selected to 
leverage the deep antiviral expertise and experience of our research and development organizations against diseases 
with significant unmet medical need.

The ongoing COVID-19 pandemic and its broad, global impacts, including supply chain disruptions, have impacted 
certain aspects of our business, including where and how our employees work in our labs and offices and how and 
when  our  nonclinical  and  clinical  studies  are  conducted.  Early  in  the  pandemic,  our  current  and  future  planned 
clinical  trials  and  preclinical  studies  were  largely  unaffected,  but  as  the  pandemic  has  continued,  we  have 
experienced enrollment delays for our current clinical studies, particularly our two ongoing multi-drug combination 
studies.

As previously announced, in January 2021, we wound down our Microbiome program to prioritize and focus our 
resources  on  our  virology  programs.  Our  Microbiome  program  had  been  developing  a  novel  class  of  oral  live 
microbial biotherapeutics candidates designed to treat disorders associated with the microbiome.

Our Primary Focus: Targeting HBV Core Protein to Achieve a Cure 

HBV is a DNA virus that infects hepatocytes and establishes a reservoir of cccDNA, a unique viral DNA moiety 
that  resides  in  the  cell  nucleus  of  HBV-infected  hepatocytes  and  is  associated  with  viral  persistence  and  chronic 
infection.  No  currently  approved  oral  therapies  target  cccDNA  activity  directly,  which  makes  molecules  that  can 
modulate  cccDNA  generation  or  disrupt  its  function  highly  sought  in  the  HBV  field.  As  a  result,  most  of  our 
research and development efforts to date have focused on discovering and developing compounds targeting the core 
protein, a viral protein involved in numerous aspects of the HBV replication cycle, including the generation of HBV 
cccDNA. Through our research efforts, we have discovered several chemically distinct series of small molecule core 
inhibitors that directly target and allosterically inhibit core protein functions.

Vebicorvir

Vebicorvir  (VBR),  our  lead  core  inhibitor  product  candidate,  is  licensed  from  Indiana  University.  The  conduct  of 
our initial Phase 2 studies, Study 201 and 202, is complete. In these studies, VBR administered with NrtI therapy 
demonstrated  a  favorable  safety  profile  and  led  to  greater  viral  suppression  of  both  HBV  DNA  and  viral  pgRNA 
than NrtI therapy alone.

Our  most  recently  completed  study  for  VBR,  Study  211,  involved  transitioning  patients  who  met  the  requisite 
stopping  criteria,  as  determined  in  collaboration  with  our  lead  investigators  and  the  U.S.  Food  and  Drug 
Administration (FDA), off of therapy to test for sustained virologic response (SVR). SVR refers to sustained viral 
suppression  (more  than  six  months)  of  HBV  DNA  below  LLOQ  and  would  be  consistent  with  a  successful  finite 

38

treatment for chronic HBV infection. During the trial, it became clear that patients who stopped therapy in Study 
211  had  not  achieved  SVR,  as  all  patients  relapsed,  meaning  they  had  detectable  HBV  and  the  dual  combination 
therapy  of  VBR  +  NrtI  was  insufficient  to  cure  chronic  HBV  infection  in  the  studied  population.  Based  on  these 
results, we terminated Study 211 in the fourth quarter of 2020. We presented follow-up data from Study 211 related 
to virologic response, safety and resistance following treatment discontinuation, at the European Association for the 
Study  of  the  Liver’s  (EASL)  International  Liver  CongressTM  in  June  2021  (EASL  2021).  At  the  American 
Association  for  the  Study  of  Liver  Diseases  (AASLD)  Annual  Meeting  in  November  2021  (AASLD  2021),  we 
presented  additional  follow-up  data  from  Study  211  demonstrating  that  patients  had  increases  of  HBV  DNA  and 
pgRNA  after  discontinuation  of  VBR  despite  continued  NrtI  treatment,  further  supporting  that  core  inhibitors 
deepen viral suppression in combination with NrtIs.

Based  on  discussions  with  leading  viral  hepatitis  experts,  global  regulatory  discussions  and  feedback,  and,  with 
respect to the China territory, discussions and agreement with our collaboration partner, BeiGene, Ltd. (BeiGene), in 
early 2021, we decided to not move forward with the global registrational studies for VBR as a CST with NrtI. The 
decision was made to focus on the greatest unmet medical need of patients, which lies predominantly in cure, rather 
than CST. As a result, we terminated Study 205 and began to focus our efforts with VBR in combination with NrtI 
and additional mechanisms targeting finite and curative combination therapy.

We  currently  have  two  Phase  2  triple  combination  studies  involving  VBR  ongoing,  with  a  third  expected  to  be 
initiated in the first half of 2022. These studies are detailed below. See “—Multi-Drug Combination Studies.”

Next-Generation Core Inhibitors

In pursuit of our goal of developing finite and curative therapies for patients with chronic HBV infection, we plan to 
advance the optimal core inhibitor in our portfolio for use as the antiviral backbone with NrtI. While we currently 
have VBR, our first-generation core inhibitor product candidate, and 3733, a next-generation product candidate, in 
clinical studies, we expect to initiate Phase 1a studies of 4334, our most potent next-generation product candidate in 
the second half of 2022. Based on the clinical progress of these candidates, we will apply disciplined, data-driven 
analyses to identify the optimal candidate to advance into late-stage clinical trials to produce potentially higher cure 
rates than are currently obtainable for patients with chronic HBV infection under the current standard of care.

ABI-H3733

Our first of two next-generation core inhibitor product candidates, 3733, was internally discovered and developed. 
The  chemical  scaffold  of  3733  is  novel  and  distinct  from  each  of  VBR,  4334  and  our  discontinued  core  inhibitor 
product candidate, ABI-H2158 (2158).

In  2020,  we  initiated  and  completed  a  Phase  1a  clinical  study  of  3733  to  evaluate  safety,  tolerability  and 
pharmacokinetics  (PK)  following  single  ascending  dose  and  multiple  ascending  dose  administration  in  healthy 
subjects  in  New  Zealand.  Preliminary  data  indicate  that  3733  was  generally  well-tolerated  and  had  favorable  PK. 
Results detailing 3733’s safety and PK from this study were presented in a poster presentation at AASLD 2021.

In  addition,  at  EASL  2021,  we  presented  observations  on  3733’s  enhanced  potency  and  target  coverage  for  both 
antiviral activity and inhibition of cccDNA generation as compared to VBR and 2158.

We expect to initiate a Phase 1b study with an improved formulation of 3733 in patients with chronic HBV infection 
in the first half of 2022.

ABI-4334

In  mid-2021,  we  announced  the  selection  of  4334,  our  other  next-generation  core  inhibitor  product  candidate.  As 
with  all  of  our  core  inhibitor  product  candidates  nominated  after  VBR,  4334  was  internally  discovered  and 
developed. In addition, the chemical scaffold of 4334 is also novel and distinct from each of VBR, 3733 and 2158.

We nominated 4334 based on a preclinical target drug profile that indicates enhanced target coverage and potency to 
prevent both formation of new virus and cccDNA, which is responsible for maintaining the HBV viral reservoir. We 
believe that 4334 has a best-in-class preclinical profile, with single-digit nanomolar potency against the production 
of new virus and the formation of cccDNA. Preclinically to date, 4334 has also demonstrated pan-genotypic activity, 
an improved resistance profile and a favorable safety profile. Preclinical characterization of 4334 was shared in a 
poster presentation at AASLD in November 2021.

Our  preclinical  work  on  4334  is  ongoing,  with  the  aim  of  completing  Investigational  New  Drug  (IND)  enabling 
studies and initiating a Phase 1a clinical study in the second half of 2022.

39

ABI-2158

In  September  2021,  we  discontinued  development  of  2158  following  the  observation  of  elevated  alanine 
transaminase (ALT) levels in the Phase 2 clinical study consistent with drug-induced hepatotoxicity.

Multi-Drug Combination Studies

We believe that core inhibitors and NrtI will be central to finite and curative therapies for chronic HBV infection. 
Therefore, as we continue to develop and advance our current and future core inhibitors through clinical studies, we 
plan  to  conduct  multi-drug  combination  studies  in  parallel  that  add  additional  drugs  (or  compounds)  with 
nonoverlapping  mechanisms  of  action  to  the  core  inhibitor  +  NrtI  antiviral  backbone.  We  currently  have  two 
ongoing triple combination studies and a third triple combination study expected to start in the first half of 2022 to 
study VBR in combination with NrtI and a third mechanism of action.

Our  first  triple  combination  study  is  being  conducted  pursuant  to  a  Clinical  Trial  Agreement  with  Arbutus 
Biopharma  Corporation  (Arbutus  Biopharma)  and  consists  of  a  randomized,  multi-center,  open-label  Phase  2 
clinical  study  to  explore  the  safety,  PK  and  antiviral  activity  of  the  triple  combination  of  VBR,  NrtI  and  AB-729 
(Arbutus  Biopharma’s  investigational  RNAi  candidate)  compared  to  the  double  combinations  of  VBR  +  NrtI  and 
AB-729  +  NrtI  in  virologically  suppressed  patients.  This  clinical  study  initiated  in  the  first  quarter  of  2021  and 
completed  enrollment  in  February  2022.  We  expect  to  share  interim  on-treatment  results  from  this  study  in  the 
second half of 2022.

Our  second  triple  combination  study  evaluates  VBR  and  NrtI  in  combination  with  interferon  in  treatment-naïve 
HBeAg positive subjects. This study was also initiated in the first quarter of 2021, and we expect enrollment to be 
complete in March 2022. We expect to share interim on-treatment results from this study in the second half of 2022.

Our  third  triple  combination  study  will  be  conducted  pursuant  to  a  Clinical  Trial  Collaboration  Agreement  with 
Antios  Therapeutics,  Inc.  (Antios)  and  will  evaluate  ATI-2173,  Antios’s  investigational  proprietary  active  site 
polymerase  inhibitor  nucleotide  (ASPIN),  VBR  and  tenofovir  disoproxil  fumarate,  an  NrtI.  This  multi-center, 
double-blinded,  placebo-controlled  study  will  evaluate  the  safety,  PK  and  antiviral  activity  of  this  all-oral  triple 
combination. We expect to initiate this study, which will enroll ten treatment-naïve or off-treatment HBeAg negative 
or positive patients in a 12-week treatment study, in the first half of 2022. The study plan initially included a site in 
Ukraine, but we will no longer be conducting the study there due to the instability resulting from Russia’s recent 
invasion of Ukraine. We expect these changes to our study plan to result in a delayed data readout.

Both  our  first  and  second  triple  combination  studies  have  experienced  enrollment  delays  due  to  the  ongoing 
COVID-19 pandemic. The pandemic has impacted patients and study sites through patient screening delays, travel 
restrictions  and  hesitancy  to  travel  to  study  sites.  The  pandemic  has  also  impacted  our  vendors,  as  our  central 
laboratories  have  been  unable  to  meet  their  contractual  obligations,  and  our  vendors  have  experienced  staffing 
constraints and supply chain challenges as they seek to obtain lab kits, reagents and other items necessary to enroll 
patients in our studies. As a result, we were unable to fully enroll our first and second triple combination studies in 
2021 as initially planned; however, based on enrollment to date, we do not believe these delays will impact interim 
data readouts for these studies, which remains on schedule in 2022.

Beyond Core Inhibitors

In addition to the development and advancement of our core inhibitor portfolio and our current and future multi-drug 
combination  studies,  our  research  and  development  team  is  working  on  discovering  and  developing  cccDNA 
disruptors and small molecules targeting two novel undisclosed HBV targets, which we expect to announce in the 
first half of 2022, to complement our HBV cure strategy. 

In  November  2020,  we  entered  into  an  exclusive,  two-year  collaboration  and  option  agreement  with  Door 
Pharmaceuticals,  LLC  (Door  Pharma)  focused  on  the  development  of  a  novel  class  of  HBV  inhibitors.  Door 
Pharma’s discovery platform targets functions of core protein distinct from viral assembly and have the potential to 
interfere  with  viral  nucleic  acid  including  intra-nuclear  cccDNA,  providing  a  strong  complement  to  our  current 
portfolio. Together with Door Pharma, we are working on identifying cccDNA disruptors, which will be aimed at 
inhibiting  different  intra-nuclear  steps  in  the  viral  replication  cycle  that  complement  the  activity  of  our  core 
inhibitors.

Under  the  terms  of  the  agreement,  Door  Pharma  will  build  upon  its  previous  efforts  to  lead  and  conduct  new 
discovery  research,  which  we  will  fund.  In  return  for  an  up-front  payment  and  success-based  milestones  and 
royalties, we will be granted an exclusive option to license compounds arising from the collaboration and will be 
responsible for the continued development and commercialization of optioned compounds.

40

Additional Antiviral Opportunities

In addition to our work toward developing finite and curative therapies for patients with chronic HBV infection, we 
have  expanded  our  research  and  development  organizations’  reach  by  pursuing  exploratory  research  on  novel 
compounds targeting other viruses. Our expanded focus leverages the depth and breadth of virology expertise of our 
research and development organization to diversify our pipeline into areas of high unmet medical need. 

We expect to disclose more information regarding these discovery programs on additional viral targets in mid-2022.

Operations

We  currently  have  corporate  and  administrative  offices  and  research  laboratory  space  in  South  San  Francisco, 
California as well as registrational offices in China. 

Since our inception, we have had no revenue from product sales and have funded our operations principally through 
debt  financings  prior  to  our  initial  public  offering  in  2010  and  through  equity  financings  and  collaborations  since 
then.  Our  operations  to  date  have  been  primarily  limited  to  organizing  and  staffing  our  company,  licensing  our 
product  candidates,  discovering  and  developing  our  product  candidates,  maintaining  and  improving  our  patent 
portfolio and raising capital. 

We have generated significant losses to date, and we expect to continue to generate losses as we develop our product 
candidates. As of December 31, 2021, we had an accumulated deficit of $631.4 million. Because we do not generate 
revenue  from  any  of  our  product  candidates,  our  losses  will  continue  as  we  further  develop  and  seek  regulatory 
approval for, and commercialize, our product candidates. As a result, our operating losses are likely to be substantial 
over  the  next  several  years  as  we  continue  the  development  of  our  product  candidates  and  thereafter  if  none  are 
approved or successfully launched. We are unable to predict the extent of any future losses or when we will become 
profitable, if at all.

In  mid-March  2020,  as  a  result  of  the  COVID-19  pandemic,  six  San  Francisco  Bay  Area  counties  announced  a 
shelter-in-place order, restricting all residents to their homes, with few exceptions. Within a week, California issued 
a statewide stay-at-home order. As a biotechnology company, we were exempt from such orders. On June 15, 2021, 
California reopened its economy, and all applicable local orders were also lifted on June 15, 2021. In addition, we 
have taken the additional step of requiring that all of our employees be fully vaccinated against COVID-19.

There has not been any significant interruption to date of essential activities at our offices, including work in our 
laboratories with proper protections and procedures in place. While we have experienced some shipping delays or 
shortages  of  personal  protective  equipment  (PPE)  that  are  important  to  maintaining  normal  workflows  in  our 
laboratories, we have been able to continue our critical research activities through schedule shifts, use of PPE on-
hand and reallocation of certain resources that allow our employees to practice “social distancing” and comply with 
applicable laws. Substantially all of our U.S.-based non-research employees have been working from their homes 
since mid-March 2020. Early in the pandemic, our current and future planned clinical trials and preclinical studies 
were largely unaffected, but as the pandemic has continued, we have experienced enrollment delays in our current 
clinical studies, particularly our two ongoing multi-drug combination studies. We continually work with our contract 
research  organizations  (CROs)  and  other  vendors  to  ensure,  to  the  extent  possible,  that  services  are  provided  in  a 
timely manner while also identifying alternative vendors and strategies to utilize in the event that COVID- or third 
party-related  delays  threaten  our  ability  to  meet  our  timelines.  We  cannot  currently  predict  the  specific  extent, 
duration or full impact that the COVID-19 pandemic will have on our ongoing and planned research efforts, clinical 
studies and other business operations. We continue to monitor the situation regularly for additional potential delays, 
or modifications to our ongoing and planned studies and, if circumstances warrant, we may adjust our budget and 
operating plan.

41

Financial Operations Overview

Research and Development Expense

Research  and  development  expenses  consist  primarily  of  costs  incurred  for  our  research  activities,  including  our 
drug  discovery  efforts,  target  validation,  lead  optimization  and  the  development  of  our  product  candidates,  which 
include:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

employee-related expenses including salaries, benefits, and stock-based compensation expense;

expenses  incurred  under  agreements  with  third  parties,  including  CROs  that  conduct  research  and 
development,  nonclinical  and  clinical  activities  on  our  behalf  and  the  cost  of  consultants,  and  contract 
manufacturing organizations (CMOs) that manufacture all of our drug substance and the drug product used 
in our HBV program;

the cost of lab supplies and acquiring, developing, and manufacturing nonclinical and, in the case of our 
Microbiome program, early-stage clinical study materials;

fees related to our license agreements; and

facilities,  depreciation,  and  other  expenses,  which  include  direct  and  allocated  expenses  for  rent  and 
maintenance of facilities, insurance, and other operating costs.

Research and development costs are expensed as incurred. Nonrefundable advance payments for goods or services 
to  be  received  in  the  future  for  use  in  research  and  development  activities  are  deferred  and  capitalized.  The 
capitalized amounts are expensed as the related goods are delivered or the services are rendered.

We  use  our  employee  and  infrastructure  resources  across  multiple  research  and  development  programs,  and  we 
allocate  internal  employee-related  and  infrastructure  costs,  as  well  as  certain  third-party  costs,  to  each  of  our 
programs based on the personnel resources allocated to such program. Our research and development expenses, by 
major program, are outlined in the table below (in thousands):

Year Ended December 31,

2021

2020

HBV .................................................................................................................  $
Microbiome ......................................................................................................   
Total ............................................................................................................  $

72,616    $
(4,092) (1) 
68,524    $

71,957   
34,866   
106,823   

(1) Expenses presented for Microbiome for the year ended December 31, 2021 include a gain of $3.0 million on the 
sale of assets under the Asset Purchase Agreement (Microbiome Purchase Agreement) and the reversal of $2.7 
million  of  previously  recognized  stock-based  compensation  expense  related  to  forfeited  awards  of  terminated 
employees due to the wind-down of the Microbiome program. 

The successful discovery and development of our product candidates is highly uncertain. As such, at this time, we 
cannot reasonably estimate, or know the nature, timing and estimated costs, of the efforts that will be necessary to 
complete the remainder of their development. We are also unable to predict when, if ever, material net cash inflows 
will  commence  from  our  product  candidates.  This  is  due  to  the  numerous  risks  and  uncertainties  associated  with 
developing medicines, including the uncertainty of:

(cid:129)

(cid:129)

(cid:129)

the  timing,  progress  and  success  of  our  clinical  trials  and  research  discovery  team  in  identifying  new 
product candidates;

establishing  an  appropriate  safety  profile  with  IND-enabling  toxicology  studies  sufficient  to  advance 
additional product candidates into clinical development;

successful enrollment in, and completion of, clinical studies;

42

 
 
   
 
 
   
   
(cid:129) making arrangements with third-party manufacturers; and

(cid:129)

obtaining  and  maintaining  patent  and  trade  secret  protection  and  regulatory  exclusivity  for  our  product 
candidates.

A change in the outcome of any of these variables or variables discussed in “Item 1A. Risk Factors” with respect to 
the development of any of our product candidates would significantly change the costs and timing associated with 
the development of that product candidate.

Research and development activities are central to our business model. Product candidates in later stages of clinical 
development generally have higher development costs than those in earlier stages of clinical development, primarily 
due to the increased size and duration of later-stage clinical studies. However, we do not believe that it is possible at 
this  time  to  accurately  project  total  program-specific  expenses  through  commercialization.  There  are  numerous 
factors  associated  with  the  successful  commercialization  of  any  of  our  product  candidates,  including  future  trial 
design and various regulatory requirements, many of which cannot be determined with accuracy at this time based 
on our stage of development. Additionally, future commercial and regulatory factors beyond our control will impact 
our clinical development programs and plans.

General and administrative expenses

General  and  administrative  expenses  consist  primarily  of  salaries  and  other  related  costs,  including  stock-based 
compensation,  for  personnel  in  executive,  finance,  accounting,  business  development,  legal  and  human  resources 
functions.  Other  significant  costs  include  facility  costs  not  otherwise  included  in  research  and  development 
expenses, insurance costs, legal fees relating to patents and corporate matters and fees for accounting and consulting 
services.

We anticipate that our general and administrative expenses will increase in the future to support continued research 
and development activities, potential commercialization of our product candidates and costs of operating as a public 
company. These increases will likely include increased costs related to the hiring of additional personnel and fees to 
outside  consultants,  lawyers  and  accountants,  among  other  expenses.  Additionally,  we  anticipate  increased  costs 
associated  with  being  a  public  company,  including  expenses  related  to  services  associated  with  maintaining 
compliance  with  exchange  listing  and  U.S.  Securities  and  Exchange  Commission  (SEC)  requirements,  insurance, 
and investor relations costs.

Impairment of goodwill and indefinite-lived intangible asset

Goodwill and our indefinite-lived intangible asset are reviewed for impairment at least annually in the fourth quarter 
and more frequently if events or other changes in circumstances indicate the carrying amount of the assets may not 
be recoverable. Impairment of goodwill and an indefinite-lived intangible assets is determined to exist when the fair 
value  is  less  than  the  carrying  value  of  the  asset  being  tested.  In  the  fourth  quarter  of  2021,  we  concluded  both 
goodwill and our indefinite-lived intangible asset were fully impaired resulting in the full write-off of these balances 
to the statement of operations and comprehensive loss.

Interest income

Interest income consists of interest earned on our cash and cash equivalents and available-for-sale securities.

Critical Accounting Estimates

Our  management’s  discussion  and  analysis  of  our  financial  condition  and  results  of  operations  is  based  on  our 
consolidated  financial  statements,  which  we  have  prepared  in  accordance  with  accounting  principles  generally 
accepted  in  the  United  States.  The  preparation  of  these  consolidated  financial  statements  requires  us  to  make 
estimates and assumptions that affect the reported amounts of assets and liabilities and the disclosure of contingent 
assets and liabilities at the date of the financial statements, as well as the reported amounts of revenues and expenses 
during the reporting periods. Note 2 to the Consolidated Financial Statements describes the significant accounting 
policies and methods used in the preparation of our consolidated financial statements. We evaluate our estimates and 
judgments,  including  those  described  in  greater  detail  below,  on  an  ongoing  basis.  We  base  our  estimates  on 
historical experience and on various other factors that we believe are reasonable under the circumstances, the results 
of which form the basis for making judgments about the carrying value of assets and liabilities that are not readily 
apparent  from  other  sources.  Actual  results  may  differ  from  these  estimates  under  different  assumptions  or 
conditions.

43

Goodwill and Indefinite-Lived Intangible Asset

Goodwill and our indefinite-lived intangible asset are reviewed for impairment at least annually in the fourth quarter 
and more frequently if events or other changes in circumstances indicate the carrying amount of the assets may not 
be recoverable.

Goodwill

We have one operating segment and reporting unit. Accordingly, our review of goodwill impairment indicators is 
performed at the entity-wide level. In performing each annual impairment assessment and any interim impairment 
assessment,  we  determine  if  we  should  qualitatively  assess  whether  it  is  more  likely  than  not  the  fair  value  of 
goodwill  is  less  than  its  carrying  amount  (the  qualitative  impairment  test).  Some  of  the  factors  considered  in  the 
assessment include general macroeconomic conditions, conditions specific to the industry and market, cost factors, 
the overall financial performance and whether there have been sustained declines in our share price. If we conclude 
it is more likely than not that the fair value of the reporting unit is less than its carrying amount, or elect not to use 
the qualitative impairment test, a quantitative impairment test is performed. 

We use our market capitalization as an indicator of fair value. We believe that since our reporting unit is publicly 
traded, the ability of a controlling stockholder to benefit from synergies and other intangible assets which arise from 
control might cause the fair value of our reporting unit as a whole to exceed our market capitalization. However, we 
believe the fair value measurement need not be based solely on the quoted market price of an individual share of our 
common stock, but also can consider the impact of a control premium in measuring the fair value of its reporting 
unit. The control premium utilized is based on control premiums observed in recent acquisitions of entities similar to 
us which were made on a non-minority basis. Should our market capitalization be less than our total stockholders’ 
equity as of our annual test date or as of any interim impairment testing date, we also consider market comparables, 
recent  trends  in  our  stock  price  over  a  reasonable  period  and,  if  appropriate,  use  an  income  approach  (discounted 
cash flow) to determine whether the fair value of our reporting unit is greater than our carrying amount. When we 
use an income approach, we establish a fair value by estimating the present value of our projected future cash flows, 
adjusted for probabilities of technical success, expected to be generated from our business. The discount rate applied 
to the projected future cash flows to arrive at the present value is intended to reflect all risks of ownership and the 
associated  risks  of  realizing  the  stream  of  projected  future  cash  flows.  Our  discounted  cash  flow  methodology 
considers  projections  of  financial  performance  for  a  period  of  several  years  combined  with  an  estimated  residual 
value. 

We elected to perform a quantitative impairment assessment of goodwill for our single reporting unit in the fourth 
quarter of 2021 due to a sustained decline in our market capitalization, an increase in negative economic outlook for 
biotech markets and a fourth quarter unfavorable clinical trial result for a competitor’s curative combination therapy 
for HBV infection. We estimated and reconciled the fair value of our reporting unit using both a market approach, 
utilizing our market capitalization adjusted for an estimated control premium, and the income approach, discounting 
future  cash  flows  based  on  management’s  expectations  of  timelines  to  complete  clinical  trials,  regulatory  and 
commercial  probabilities  of  technical  success  as  well  as  future  earnings  forecast.  Before  completing  our  goodwill 
impairment  test,  we  first  tested  our  indefinite-lived  intangible  asset  then  our  remaining  long-lived  assets  for 
impairment.  We  concluded  our  indefinite-lived  intangible  asset  was  fully  impaired  and  included  that  impairment 
within the net carrying value of our reporting unit for purposes of our goodwill impairment test. No impairment was 
identified  for  our  long-lived  assets.  We  concluded  the  fair  value  of  our  single  reporting  unit  was  less  than  its 
carrying value and therefore recognized an impairment charge of $12.6 million to write off the entire balance of our 
goodwill.  This  was  primarily  due  to  an  increase  in  discount  rates  from  the  standpoint  of  a  market  participant  and 
their  views  on  how  such  aforementioned  events  increase  the  risks  associated  with  the  Company.  The  fair  value 
measurements were primarily based on Level 3 inputs. The calculation of the impairment charge includes substantial 
fact-based  determinations  and  estimates  including  discount  rates,  future  revenues,  profitability,  cash  flows, 
probabilities  of  technical  success,  and  fair  values  of  assets  and  liabilities,  and  any  changes  to  these  assumptions 
could result in changes to the fair value of our single reporting unit. The goodwill impairment charge is reflected in 
impairment  of  goodwill  and  indefinite-lived  intangible  asset  in  the  consolidated  statements  of  operations  and 
comprehensive loss.  

44

Indefinite-Lived Intangible Asset

Our indefinite-lived intangible asset consist of in-process research and development (IPR&D) associated with small 
molecule core inhibitors that directly target and allosterically inhibit core protein functions associated with HBV that 
were  acquired  with  the  acquisition  of  Assembly  Pharmaceuticals,  Inc.  in  2014.  IPR&D  represents  the  fair  value 
assigned  to  incomplete  research  projects  we  acquired  through  a  business  combination  which,  at  the  time  of 
acquisition,  had  not  reached  technological  feasibility,  regardless  of  whether  they  had  alternative  use. The  primary 
basis for determining the technological feasibility or completion of these projects is obtaining regulatory approval to 
market  the  underlying  products  in  an  applicable  geographic  region.  We  classify  in-process  research  and 
development  acquired  in  a  business  combination  as  an  indefinite-lived  intangible  asset  until  the  completion  or 
abandonment of the associated research and development efforts. Upon completion of the associated research and 
development efforts, we perform a final test for impairment and will determine the useful life of the technology and 
begin amortizing the assets to reflect their use over their remaining lives. Upon permanent abandonment, we would 
write off the remaining carrying amount of the associated IPR&D intangible asset.

In  performing  each  annual  impairment  assessment  and  any  interim  impairment  assessment,  we  determine  if  we 
should  qualitatively  assess  whether  it  is  more  likely  than  not  the  fair  value  of  our  IPR&D  asset  is  less  than  its 
carrying  amount  (the  qualitative  impairment  test).  If  we  conclude  that  is  the  case,  or  elect  not  to  use  qualitative 
impairment test, we would proceed with quantitatively determining the fair value of the IPR&D asset and comparing 
its fair value to its carrying value to determine the amount of impairment, if any (the quantitative impairment test).

In performing the qualitative impairment test, we consider the results of the most recent quantitative impairment test 
and identify the most relevant drivers of the fair value for the IPR&D asset. The most relevant drivers of fair value 
we  have  identified  are  consistent  with  the  assumptions  used  in  the  quantitative  estimate  of  the  IPR&D  asset 
discussed below. Using these drivers, we identify events and circumstances that may have an effect on the fair value 
of the IPR&D asset since the last time the IPR&D’s fair value was quantitatively determined. We then weigh these 
factors to determine and conclude if it is more likely than not the IPR&D asset is impaired. If it is more likely than 
not the IPR&D asset is impaired, we proceed with quantitatively determining the fair value of the IPR&D asset.

We use the income approach to determine the fair value of our IPR&D asset. This approach calculates fair value by 
estimating  the  after-tax,  probability  of  technical  success  adjusted,  cash  flows  attributable  to  an  in-process  project 
over its useful life and then discounting these after-tax cash flows back to a present value. This estimate includes 
significant  assumptions  regarding  the  estimates  market  participants  would  make  in  evaluating  the  IPR&D  asset, 
including the probability of successfully completing clinical trials and obtaining regulatory approval to market the 
IPR&D asset, the timing of and the expected costs to complete IPR&D projects, future net cash flows from potential 
drug sales, which are based on estimates of the sales price of the drug, the number of patients who will be diagnosed 
and treated and our competitive position in the marketplace, and appropriate discount and income tax rates. The fair 
value  of  our  IPR&D  asset  could  vary  based  on  the  significant  assumptions  described.  Any  impairment  to  be 
recorded is calculated as the difference between the fair value of the IPR&D asset as of the date of the assessment 
with the carrying value of the IPR&D asset on our consolidated balance sheet.

During  the  fourth  quarter  of  2021  and  prior  to  the  goodwill  impairment  test,  we  also  completed  a  quantitative 
impairment test for our IPR&D asset associated with the Assembly Pharmaceuticals, Inc. acquisition. We utilized 
the discounted cash flow model of the income approach and determined the carrying value of our IPR&D asset was 
fully impaired resulting in an impairment charge of $29.0 million. This was primarily driven by a higher discount 
rate applied to future cash flows based on a market participant’s view of increased risk associated with a negative 
economic  outlook  for  biotech  markets  and  a  fourth  quarter  unfavorable  clinical  trial  result  for  a  competitor’s 
curative  combination  therapy  for  HBV  infection.  The  fair  value  measurements  were  primarily  based  on  Level  3 
inputs. Some of the more significant assumptions inherent in the development of the model included the estimated 
annual  cash  flows,  particularly  net  revenues,  the  appropriate  discount  rate  to  select  in  order  to  measure  the  risk 
inherent  in  the  future  cash  flows,  cost  to  complete  the  IPR&D  project  as  well  as  other  factors.  The  impairment 
charge  recorded  is  reflected  in  impairment  of  goodwill  and  indefinite-lived  intangible  asset  in  the  consolidated 
statements of operations and comprehensive loss.

Research and Development Expense and Accruals 

Research and development costs include personnel-related costs, outside contracted services including clinical study 
costs, facilities costs, fees paid to consultants, milestone payments prior to FDA approval, license fees prior to FDA 
approval, professional services, travel costs, dues and subscriptions, depreciation and materials used in clinical trials 
as well as research and development and costs incurred under our collaboration agreements. 

45

As  part  of  the  process  of  preparing  our  consolidated  financial  statements,  we  are  required  to  estimate  certain 
research and development expenses. This process involves reviewing quotations and contracts, reviewing the terms 
of our license agreements, communicating with our vendors and applicable personnel to identify services that have 
been performed on our behalf and estimating the level of service performed and the associated cost incurred for the 
service  when  we  have  not  yet  been  invoiced  or  otherwise  notified  of  the  actual  cost.  The  majority  of  our  service 
providers invoice us monthly in arrears for services performed or when contractual milestones are met. Payments 
made prior to the receipt of goods or services to be used in research and development are capitalized until the goods 
or  services  are  received.  Such  payments  are  evaluated  for  current  or  long-term  classification  based  on  when  they 
will  be  realized  or  consumed.  Examples  of  estimated  amortized  or  accrued  research  and  development  expenses 
include fees to:

(cid:129)

(cid:129)

(cid:129)

CROs and other service providers in connection with clinical studies;

CMOs in connection with the production of clinical trial materials; and

vendors in connection with preclinical development activities.

We  base  our  expenses  related  to  clinical  studies  on  our  estimates  of  the  services  received  and  efforts  expended 
pursuant  to  contracts  with  multiple  research  institutions  and  contract  research  organizations  that  conduct  and 
manage clinical studies on our behalf. The financial terms of these agreements are subject to negotiation, vary from 
contract  to  contract  and  may  result  in  uneven  payment  flows  and  expense  recognition.  Payments  under  some  of 
these contracts depend on factors such as the successful enrollment of patients and the completion of clinical trial 
milestones. In either amortizing or accruing service fees, we estimate the time period over which services will be 
performed and the level of effort to be expended in each period. If the actual timing of the performance of services 
or  the  level  of  effort  varies  from  our  estimate,  we  adjust  the  related  prepayment  or  accrual  accordingly.  Our 
understanding  of  the  status  and  timing  of  services  performed  relative  to  the  actual  status  and  timing  of  services 
performed may vary and may result in our reporting changes in estimates in any particular period. Adjustments to 
prior period estimates have not been material for the years ended December 31, 2021 and 2020.

We have and may continue to enter into license agreements to access and utilize certain technology. In each case, we 
evaluate  if  the  license  agreement  results  in  the  acquisition  of  an  asset  or  a  business.  To  date,  none  of  our  license 
agreements have been considered to be acquisitions of businesses. For asset acquisitions, the upfront payments to 
acquire  such  licenses,  as  well  as  any  future  milestone  payments,  are  immediately  recognized  as  research  and 
development  expense  when  paid,  provided  there  is  no  alternative  future  use  of  the  rights  in  other  research  and 
development  projects.  These  license  agreements  may  also  include  contingent  consideration  in  the  form  of  cash 
payments  to  be  made  for  future  milestone  events.  We  assess  whether  such  contingent  consideration  meets  the 
definition of a derivative and to date we have determined that such contingent consideration are not derivatives.

Results of Operations

General

At  December  31,  2021,  we  had  an  accumulated  deficit  of  $631.4  million  primarily  as  a  result  of  research  and 
development expenses and general and administrative expenses. While we may in the future generate revenue from 
a variety of sources, including license fees, milestone payments, research and development payments in connection 
with strategic partnerships and/or product sales, our product candidates are in the clinical stage of development or in 
varying  stages  of  nonclinical  development  and  may  never  be  successfully  developed  or  commercialized. 
Accordingly, we expect to continue to incur substantial losses from operations for the foreseeable future and there 
can be no assurance that we will ever generate significant revenues.

46

Comparison of the Years Ended December 31, 2021 and 2020

Collaboration Revenue

The following table summarizes the period-over-period changes in our collaboration revenue (in thousands, except 
for percentages):

Collaboration revenue........................................  $

6,254    $

79,105    $

(72,851)   

(92%)

Year Ended December 31,
2020
2021

$ Change
2021 vs. 2020  

  % Change
  2021 vs. 2020  

Collaboration  revenue  for  the  year  ended  December 31,  2021  consists  of  the  recognition  of  deferred  revenue 
allocated  to  2158  under  the  BeiGene  Agreement  upon  discontinuing  development  of  2158.  Collaboration  revenue 
for the year ended December 31, 2020 consists of $31.0 million recognized for the transfer of the VBR License upon 
entering  into  the  BeiGene  Agreement  and  the  remaining  deferred  revenue  balance  of  $37.0  million  and 
reimbursements  incurred  under  the  Allergan  Agreement,  for  which  AbbVie  Inc.  (formerly  Allergan)  gave  written 
notice of termination in June 2020 following its acquisition of Allergan. 

Research and Development Expense 

The  following  table  summarizes  the  period-over-period  changes  in  our  research  and  development  expenses  (in 
thousands, except for percentages):

Year Ended December 31,

$ Change

  % Change

Program/Description
HBV program ....................................................   $
Microbiome program.........................................  
Total research and development expenses ........   $

2021

2020

  2021 vs. 2020  

72,616    $
(4,092)  
68,524    $

71,957    $
34,866     
106,823    $

    2021 vs. 2020  
659 
(38,958)   
(38,299)   

1%
(112%)
(36%)

Research and development expenses were $68.5 million for the year ended December 31, 2021 compared to $106.8 
million for the year ended December 31, 2020. The $38.3 million decrease in research and development expenses 
was primarily related to the wind-down of the Microbiome program and includes a $3.0 million gain on the sale of 
Microbiome  assets.  The  decrease  was  partially  offset  by  an  increase  of  $0.7  million  in  research  and  development 
expenses  related  to  the  HBV  program,  which  were  primarily  due  to  increases  in  clinical  activities,  chemistry  and 
manufacturing control activities to support clinical development of our compounds and increased salary and benefits 
due to our hiring of additional employees. Research and development expenses include stock-based compensation 
expenses  of  $0.5  million  and  $11.4  million  for  the  years  ended  December  31,  2021  and  2020,  respectively.  The 
decrease  in  stock-based  compensation  expense  is  primarily  due  to  a  decrease  in  the  grant  date  fair  value  of  stock 
option awards and reversals of $4.8 million of previously recognized stock-based compensation expense related to 
awards forfeited by terminated employees. 

47

 
 
   
 
 
  
   
   
 
 
   
 
 
 
   
  
 
 
General and Administrative Expense

The  following  table  summarizes  the  period-over-period  change  in  our  general  and  administrative  expenses  (in 
thousands, except for percentages):

Year Ended December 31,
2020
2021

$ Change
2021 vs. 2020  

  % Change
  2021 vs. 2020  

General and administrative expenses.................  $

28,780    $

37,058    $

(8,278)   

(22%)

General and administrative expenses were $28.8 million for the year ended December 31, 2021, compared to $37.1 
million  for  the  year  ended  December  31,  2020. General  and  administrative  expenses  include  stock-based 
compensation  expense  of  $4.7  million  and  $10.5  million  for  the  years  ended  December  31,  2021  and  2020, 
respectively. The decrease in stock-based compensation expense of $5.8 million was due to a decrease in the grant 
date  fair  value  of  recent  stock  option  awards  and  a  reversal  of  $2.1  million  of  previously  recognized  stock-based 
compensation  expense  during  the  year  ended  December  31,  2021  related  to  awards  forfeited  by  terminated 
employees.  Additionally,  during  the  year  ended  December  31,  2020,  we  recognized  $0.7  million  as  a  cumulative 
catch-up  adjustment  of  stock-based  compensation  expense  for  RSUs  with  performance-based  vesting  conditions 
granted  to  an  executive  officer  for  which  the  underlying  performance  condition  was  deemed  probable.  We  also 
experienced a decrease of $2.6 million in professional fees during the year ended December 31, 2021 compared to 
the same period in 2020 due to the amortized incremental contract costs associated with entering into the BeiGene 
Agreement in 2020.

Impairment of Goodwill and Indefinite-Lived Intangible Asset

The following table summarizes the period-over-period change in our impairment of goodwill and indefinite-lived 
intangible asset (in thousands, except for percentages):

Year Ended December 31,
2020
2021

$ Change
2021 vs. 2020  

  % Change
  2021 vs. 2020  

Impairment of goodwill and indefinite-lived 
intangible asset...................................................   $

41,638    $

—    $

41,638 

100%

In the fourth quarter of 2021, we concluded our goodwill and IPR&D asset were impaired due to a sustained decline 
in  our  stock  price  as  well  as  industry  and  market  factors  which  caused  an  increase  in  the  estimated  discount  rate 
applied to future cash flows. This resulted in the entire write-off of our goodwill and IPR&D asset of $12.6 million 
and $29.0 million, respectively.

Interest and Other Income, Net

The following table summarizes the period-over-period changes in our interest and other income, net (in thousands, 
except for percentages):

Year Ended December 31,
2020
2021

$ Change
2021 vs. 2020  

  % Change
  2021 vs. 2020  

Interest and other income, net............................   $

302    $

2,624    $

(2,322)   

-88%

Interest and other income, net was $0.3 million for the year ended December 31, 2021, compared to $2.6 million for 
the year ended December 31, 2020. The decrease was primarily due to less interest income earned on marketable 
securities,  corporate  bonds  and  money  market  funds  caused  by  lower  yields  and  a  decrease  in  the  total  amount 
invested in marketable securities in 2021.  

Income Tax Benefit

The following table summarizes the period-over-period changes in our income tax benefit (in thousands, except for 
percentages):

Income tax benefit..............................................  $

2,531    $

Year Ended December 31,
2020
2021

$ Change
2021 vs. 2020  
2,531 

—    $

  % Change
  2021 vs. 2020  

100%

48

 
 
   
 
 
  
   
   
 
 
   
 
 
  
   
   
  
 
 
   
 
 
  
   
   
 
 
   
 
 
  
   
   
  
During the year ended December 31, 2021, we recognized an income tax benefit of $2.5 million due to the reversal 
of  deferred  tax  liabilities  associated  with  our  in-process  research  and  development  which  was  fully  impaired  in 
2021. 

Liquidity and Capital Resources

Sources of Liquidity

As a result of our significant research and development expenditures and the lack of any FDA-approved products to 
generate  product  sales  revenue,  we  have  not  been  profitable  and  have  generated  operating  losses  since  we  were 
incorporated  in  October  2005.  We  have  funded  our  operations  through  December  31,  2021  principally  with  debt 
prior to our initial public offering, and thereafter with equity financing, raising an aggregate of $604.6 million in net 
proceeds from public offerings and private placements from inception to December 31, 2021. 

In  December  2019,  we  sold  to  various  investors  an  aggregate  of  6,287,878  shares  of  common  stock  at  a  public 
offering price of $16.50 per share, which included the exercise in full by the underwriters of their option to purchase 
1,136,363  shares  of  common  stock,  and  pre-funded  warrants  to  purchase  2,424,242  shares  of  common  stock  at  a 
public offering price of $16.499. We received aggregate net proceeds of $134.7 million from the offering and the 
option exercise, after deducting underwriting discounts and commissions and offering expenses payable.

In  December  2020,  we  sold  an  aggregate  of  892,840  shares  of  common  stock  through  “at-the-market”  offerings 
(2020 ATM), resulting in net proceeds of $5.5 million. 

In  2021,  we  sold  an  aggregate  of  11,234,207  shares  of  common  stock  through  the  2020  ATM,  resulting  in  net 
proceeds of $52.8 million.

Future Funding Requirements

We  expect  our  expenses  related  to  HBV  program  to  increase  in  2022  and  to  generally  increase  over  time  in 
connection with our ongoing activities, particularly as we continue the research, development and clinical studies of 
our product candidates and pursue our intellectual property strategy. Accordingly, we will need to obtain substantial 
additional funding in connection with our continuing operations. If we are unable to raise capital when needed or on 
attractive terms, we could be forced to delay, reduce or eliminate our research and development programs or future 
commercialization efforts.

We  monitor  our  cash  needs  and  the  status  of  the  capital  markets  on  a  continuous  basis.  From  time  to  time,  we 
opportunistically raise capital and have done so numerous times since our initial public offering by issuing equity 
securities, most recently in November 2021. We expect to continue to raise capital when and as needed and at the 
time and in the manner most advantageous to us.

We  expect  our  existing  cash,  cash  equivalents  and  marketable  securities  will  enable  us  to  fund  our  operating 
expenses  and  capital  expenditure  requirements  for  at  least  the  next  twelve  months.  Our  contractual  obligations 
include operating lease obligations totaling $6.5 million as of December 31, 2021, of which $3.6 million are short-
term. We are subject to paying milestone, royalty and other contingent fees associated with certain collaboration and 
license agreements upon the successful achievement of development and regulatory milestones of our core inhibitor 
product candidates. We also enter into contracts in the normal course of business with CROs for clinical trials and 
CMO’s for clinical supply manufacturing and with vendors for preclinical research studies and other services and 
products  for  operating  purposes,  which  generally  provide  for  termination  within  30  days  of  notice.  Since  our 
inception, we have not engaged in any off-balance sheet arrangements as defined in Item 303(a)(4) of Regulation S-
K.   

49

Our future capital requirements will depend on many factors, including:

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

(cid:129)

the scope, progress, results and costs of our ongoing drug discovery, nonclinical development, laboratory 
testing and clinical studies of our product candidates and any additional clinical studies we may conduct in 
the future;

the extent to which we further acquire or in-license other product candidates and technologies;

our  ability  to  manufacture,  and  to  contract  with  third  parties  to  manufacture,  adequate  supplies  of  our 
product candidates for our clinical studies and any eventual commercialization;

the costs, timing and outcome of regulatory review of our product candidates;

the  costs  of  preparing,  filing  and  prosecuting  patent  applications  in  the  United  States  and  abroad, 
maintaining  and  enforcing  our  intellectual  property  rights  and  defending  intellectual  property-related 
claims; and

our ability to establish and maintain collaborations on favorable terms, if at all.

Identifying potential product candidates and conducting nonclinical testing and clinical studies is a time-consuming, 
expensive  and  uncertain  process  that  takes  years  to  complete,  and  we  may  never  generate  the  necessary  data  or 
results  required  to  obtain  marketing  approval  and  achieve  product  sales.  In  addition,  our  product  candidates,  if 
approved,  may  not  achieve  commercial  success.  Our  commercial  revenues,  if  any,  will  be  derived  from  sales  of 
medicines  that  we  do  not  expect  to  be  commercially  available  for  years,  if  at  all.  Accordingly,  we  will  need  to 
continue to rely on additional financings to achieve our business objectives. Adequate additional financings may not 
be available to us on acceptable terms, or at all.

Until  such  time,  if  ever,  as  we  can  generate  substantial  product  revenues,  we  expect  to  finance  our  cash  needs 
through  a  combination  of  equity  offerings,  debt  financings,  collaborations,  strategic  alliances  and  licensing 
arrangements. We do not have any committed external source of funds. To the extent that we raise additional capital 
through the sale of equity or convertible debt securities, the ownership interest of our stockholders will be diluted, 
and the terms of these securities may include liquidation or other preferences that adversely affect the rights of our 
common  stockholders.  Debt  financing,  if  available,  may  involve  agreements  that  include  covenants  limiting  or 
restricting  our  ability  to  take  specific  actions,  such  as  incurring  additional  debt,  making  capital  expenditures  or 
declaring dividends.

If we raise funds through additional collaborations, strategic alliances or licensing arrangements with third parties, 
we may have to relinquish valuable rights to our technologies, future revenue streams, research programs or product 
candidates or to grant licenses on terms that may not be favorable to us. If we are unable to raise additional funds 
through equity or debt financings when needed, we may be required to delay, limit, reduce or terminate our product 
development or future commercialization efforts or grant rights to develop and market product candidates that we 
would otherwise prefer to develop and market ourselves.

Cash Flows 

A summary of our cash flows for the periods presented was as follows (in thousands):

Operating activities .............................................................................................  $
Investing activities ..............................................................................................   
Financing activities .............................................................................................   
Net (decrease) increase in cash and cash equivalents....................................  $

(93,396)   $
26,515     
53,064     
(13,817)   $

(62,957)
68,070 
7,599 
12,712  

Year Ended December 31,

2021

2020

50

 
 
 
 
 
   
 
Net Cash Used in Operating Activities

Net cash used in operating activities was $93.4 million for the year ended December 31, 2021. This was primarily 
due to our net loss of $129.9 million, partially offset by the $41.6 million we recognized for the impairment of our 
goodwill and indefinite-lived intangible asset. 

Net cash used in operating activities was $63.0 million for the year ended December 31, 2020. This was primarily 
due  to  $62.2  million  of  net  loss  and  a  $28.1  million  decrease  in  deferred  revenue  from  recognition  of  deferred 
revenue  under  the  Allergan  Agreement,  partially  offset  by  an  increase  in  deferred  revenue  under  the  BeiGene 
Agreement.  These  were  offset  by  non-cash  adjustments  of  $21.9  million  of  stock-based  compensation  and  $5.2 
million of amortization of operating lease right-of-use assets.

Net Cash Provided by Investing Activities

Net  cash  provided  by  investing  activities  for  the  year  ended  December  31,  2021  was  $26.5  million.  This  was 
primarily due to proceeds of $27.3 million from sales and maturities of marketable securities, net of purchases, and 
proceeds  of  $1.5  million  from  the  sale  of  Microbiome  assets.  This  was  partially  offset  by  our  purchase  of  leased 
equipment for $3.1 million that we then sold for $0.9 million in connection with the wind-down of the Microbiome 
program.  

Net cash provided by investing activities for the year ended December 31, 2020 was $68.1 million. This was due 
to proceeds of $70.3 million from sales and maturities of marketable securities, net of purchases, used to fund our 
operations, offset by $1.8 million from the purchase of in-process research and development. 

Net Cash Provided by Financing Activities

Net cash provided by financing activities for the year ended December 31, 2021 was $53.1 million resulting from 
the net proceeds of $52.8 million from the sale of 11,234,207 shares of our common stock under the 2020 ATM and 
$0.3 million from the issuance of 88,820 shares of common stock under the Assembly Biosciences Amended and 
Restated 2018 Employee Stock Purchase Plan (2018 ESPP).

Net cash provided by financing activities for the year ended December 31, 2020 was $7.6 million resulting from the 
net  proceeds  of  $5.5  million  from  the  sale  of  892,840  shares  of  our  common  stock  under  the  2020  ATM,  $1.5 
million from the exercise of stock options to purchase 175,579 shares of common stock and $0.7 million from the 
issuance of 86,812 shares of common stock under our 2018 ESPP.

51

Item 7A. Quantitative and Qualitative Disclosures about Market Risk

Not applicable.

Item 8. Financial Statements and Supplementary Data

(a) Financial Statements

The financial statements required to be filed pursuant to this Item 8 are appended to this report. An index of 
those financial statements is found on page F-1.

(b) Supplementary Data

Not applicable.

Item 9. Changes in and Disagreements with Accountants on Accounting and Financial Disclosure

None.

Item 9A. Controls and Procedures

Evaluation of Disclosure Controls and Procedures

We maintain a system of disclosure controls and procedures, as defined in Rule 13a-15(e) promulgated under the 
Securities  and  Exchange  Act  of  1934,  as  amended  (the  Exchange  Act),  that  is  designed  to  provide  reasonable 
assurance that information, which is required to be disclosed in our reports filed pursuant to the Exchange Act, is 
accumulated and communicated to management in a timely manner. At the end of fiscal year ending December 31, 
2021, we carried out an evaluation, under the supervision, and with the participation of, our management, including 
our Chief Executive Officer and our Chief Financial Officer, of the effectiveness of the design and operation of our 
disclosure controls and procedures pursuant to Exchange Act Rule 13a-15(b). Based upon that evaluation, our Chief 
Executive Officer and Chief Financial Officer concluded that our disclosure controls and procedures for the fiscal 
year ending as of December 31, 2021 were effective at reasonable assurance levels.

Management’s Annual Report on Internal Control over Financial Reporting

Our management is responsible for establishing and maintaining adequate internal control over financial reporting, 
as such term is defined in Exchange Act Rule 13a-15(f). Our internal control over financial reporting is designed to 
provide  reasonable  assurance  to  our  management  and  Board  of  Directors  regarding  the  preparation  and  fair 
presentation  of  published  financial  statements.  A  control  system,  no  matter  how  well  designed  and  operated,  can 
only provide reasonable, not absolute, assurance that the objectives of the control system are met. Because of these 
inherent limitations, management does not expect that our internal controls over financial reporting will prevent all 
error  and  all  fraud.  Under  the  supervision  and  with  the  participation  of  our  management,  including  our  Chief 
Executive Officer and our Chief Financial Officer, we conducted an evaluation of the effectiveness of our internal 
control over financial reporting based on the framework in Internal Control-Integrated Framework issued in 2013 by 
the  Committee  of  Sponsoring  Organizations  of  the  Treadway  Commission.  Based  on  our  evaluation  under  the 
framework  in  Internal  Control-Integrated  Framework,  our  management  concluded  that  our  internal  control  over 
financial reporting was effective as of December 31, 2021.

Changes in Internal Control over Financial Reporting

There were no changes in our internal control over financial reporting in the fourth quarter of 2021 that materially 
affected, or are reasonably likely to materially affect, our internal control over financial reporting.

Item 9B. Other Information

Not applicable.

Item 9C. Disclosure Regarding Foreign Jurisdictions that Prevent Inspections

Not applicable.

52

PART III

ITEM 10.  Directors, Executive Officers and Corporate Governance

Except as set forth below, the information required by this item will be contained in our definitive proxy statement 
to be filed with the SEC in connection with the Annual Meeting of Stockholders (Proxy Statement) within 120 days 
after the conclusion of our fiscal year ended December 31, 2021 and is incorporated in this Annual Report on Form 
10-K by reference.

Code of Ethics

Our Board has adopted a Code of Ethics for our principal executive officer and all senior financial officers and a 
Code  of  Conduct  applicable  to  all  of  our  employees  and  our  directors.  Both  Codes  are  available  under  the 
“Investors—Corporate Governance” section of our website at www.assemblybio.com. If we make any substantive 
amendments to, or grant any waivers from, the Code of Ethics for our principal executive officer, principal financial 
officer, principal accounting officer, controller or persons performing similar functions, or any officer or director, 
we will disclose the nature of such amendment or waiver on our website or in a Current Report on Form 8-K.

ITEM 11.  Executive Compensation

The information required by this item will be contained in the Proxy Statement and is incorporated into this Annual 
Report on Form 10-K by reference.

ITEM  12.  Security  Ownership  of  Certain  Beneficial  Owners  and  Management  and  Related  Stockholder 
Matters

Except for the table regarding equity compensation plans, which is included in Part II, Item 5 of this Annual Report 
on Form 10-K, the information required by this item will be contained in the Proxy Statement and is incorporated 
into this Annual Report on Form 10-K by reference.

ITEM 13.  Certain Relationships and Related Party Transactions, and Director Independence

The information required by this item will be contained in the Proxy Statement and is incorporated into this Annual 
Report on Form 10-K by reference.

ITEM 14.  Principal Accounting Fees and Services

The information required by this item will be contained in the Proxy Statement and is incorporated into this Annual 
Report on Form 10-K by reference.

53

ITEM 15.  Exhibits, Financial Statement Schedules

(a) Exhibits.   The following exhibits are filed as part of this registration statement:

Exhibit
Number  

  3.1

  3.2

  4.1
  4.2
10.1

10.2*

10.3†

10.4†

10.5†‡

10.6#

10.7#

10.8#

10.9#

10.10#

10.11#

10.12#
10.13#

10.14#

10.15#

10.16#

Description of Document
 Fifth Amended and Restated Certificate of Incorporation 
dated June 11, 2020.
 Amended and Restated Bylaws as amended through 
January 22, 2021.
 Specimen of Common Stock Certificate.
Description of Securities.
 Sub-Sublease, dated as of July 18, 2018, between 
Prothena Biosciences, Inc., as Sub-Sublandlord, and 
Assembly Biosciences, Inc., as Sub-Subtenant.
 Exclusive License Agreement dated September 3, 2013 
by and between The Indiana University Research and 
Technology Corporation and Assembly Pharmaceuticals, 
Inc.
Amendment No. 1 to Exclusive License Agreement, by 
and between Assembly Biosciences, Inc. and the Indiana 
University Research and Technology Corporation.
Amendment No. 2 to Exclusive License Agreement, by 
and between Assembly Biosciences, Inc. and the Indiana 
University Research and Technology Corporation.
Collaboration Agreement, dated as of July 17, 2020, by 
and between Assembly Biosciences, Inc. and BeiGene, 
Ltd.
 Employment Agreement, dated August 6, 2019, between 
Assembly Biosciences, Inc. and John G. McHutchison, 
A.O., M.D.
 Amended and Restated Employment Agreement, dated 
July 30, 2021, between Assembly Biosciences, Inc. and 
Jason A. Okazaki.
Employment Agreement, dated July 30, 2021, between 
Assembly Biosciences, Inc. and Michael P. Samar.
 Employment Agreement, dated October 22, 2019, 
between Assembly Biosciences, Inc. and Luisa M. 
Stamm, M.D., Ph.D. effective as of November 6, 2019.
Amendment No. 1 to Employment Agreement, dated 
February 26, 2020, between Assembly Biosciences, Inc. 
and Luisa M. Stamm, M.D., Ph.D.
 Employment Agreement, dated May 1, 2020, between 
Assembly Biosciences, Inc. and William E. Delaney IV, 
Ph.D., effective as of May 27, 2020.
 2010 Equity Incentive Plan.
 Assembly Biosciences, Inc. Amended and Restated 2014 
Stock Incentive Plan.
Omnibus Amendment to Assembly Biosciences, Inc. 
Stock Incentive Plans.
 Form of Notice of Stock Option Grant and Stock Option 
Agreement under Amended and Restated 2014 Stock 
Incentive Plan.
 Form of Restricted Stock Unit Award Notice and 
Restricted Stock Unit Award Agreement under the 
Amended and Restated 2014 Stock Incentive Plan.

Registrant’s
Form
8-K

Dated
 06/01/2018 

Exhibit
No.
3.1

Filed
Herewith

8-K

 01/27/2021 

3.1

S-3

 12/30/2015 

4.1

10-Q

 11/08/2018 

10.1

X

10-Q

 11/17/2014  10.29  

10-Q

11/05/2020

10.1

10-Q

11/05/2020

10.2

10-Q

11/05/2020

10.3

10-Q

 11/07/2019 

10.1

10-Q

 11/04/2021 

10.1

10-Q

11/04/2021

10.2

10-K

 03/04/2020 

10.7

10-Q

05/08/2020

10.7

10-K

 02/25/2021  10.12  

S-1/A
8-K

  10/4/2010   10.14  
  6/6/2016  

10.1

10-Q

05/08/2020

10.2

S-8

  9/17/2014   10.28  

10-Q

 11/01/2017 

10.1

54

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Exhibit
Number  

Description of Document

10.17#

10.18#

10.19#

10.20#
10.21#

10.22#

10.23#

10.24#

10.25#

10.26#

10.27#

10.28#

10.29#

10.30#

10.31#

10.32#

10.33#

10.34#
10.35

21.1
23.1

24.1
31.1

31.2

32.1**

32.2**

 Assembly Biosciences, Inc. 2017 Inducement Award 
Plan.
 Form of Notice of Stock Option Grant and Stock Option 
Agreement under the 2017 Inducement Award Plan.
 Form of Restricted Stock Unit Award Notice and 
Restricted Stock Unit Award Agreement under the 2017 
Inducement Award Plan.
 Assembly Biosciences, Inc. 2018 Stock Incentive Plan.
Amendment No. 1 to Assembly Biosciences, Inc. 2018 
Stock Incentive Plan.
Amendment No. 3 to Assembly Biosciences, Inc. 2018 
Stock Incentive Plan.
Amendment No. 4 to Assembly Biosciences, Inc. 2018 
Stock Incentive Plan.
 Form of Notice of Stock Option Grant and Stock Option 
Agreement under the 2018 Stock Incentive Plan.
 Form of Restricted Stock Unit Award Notice and 
Restricted Stock Unit Award Agreement under the 2018 
Stock Incentive Plan.
 Form of Stock Appreciation Right Award Agreement for 
Non-U.S. Grantees under the Assembly Biosciences, Inc. 
2018 Stock Incentive Plan.
Form of Performance-Based Stock Appreciation Right 
Award Agreement for Non-U.S. Grantees under the 
Assembly Biosciences, Inc. 2018 Stock Incentive Plan.
 Amended and Restated Assembly Biosciences, Inc. 2018 
Employee Stock Purchase Plan.
 Assembly Biosciences, Inc. 2019 Inducement Award 
Plan.
Form of Notice of Stock Option Grant and Stock Option 
Agreement under the 2019 Inducement Award Plan.
Assembly Biosciences, Inc. 2020 Inducement Award 
Plan.
Form of Notice of Stock Option Grant and Stock Option 
Agreement under the 2020 Inducement Award Plan. 
Form of Restricted Stock Unit Award Notice and 
Restricted Stock Unit Award Agreement under the 2020 
Inducement Award Plan.
Assembly Biosciences, Inc. 2021 Corporate Bonus Plan. 
Open Market Sale Agreement by and between Assembly 
Biosciences, Inc. and Jefferies LLC.
 List of Subsidiaries of Assembly Biosciences, Inc.
 Consent of Independent Registered Public Accounting 
Firm.
 Power of Attorney (included on signature page).
 Certification of the Chief Executive Officer Pursuant to 
Section 302 of the Sarbanes-Oxley Act of 2002.
 Certification of the Chief Financial Officer Pursuant to 
Section 302 of the Sarbanes-Oxley Act of 2002.
 Certification of the Chief Executive Officer Pursuant to 
18 U.S.C. Section 1350 as Adopted Pursuant to Section 
906 of the Sarbanes-Oxley Act of 2002.
 Certification of the Chief Financial Officer Pursuant to 18 
U.S.C. Section 1350 as Adopted Pursuant to Section 906 

55

Registrant’s
Form
10-Q

Dated
 08/09/2017 

Exhibit
No.
10.1

Filed
Herewith

10-Q

 08/09/2017 

10.2

10-Q

 08/09/2017 

10.3

8-K
8-K

8-K

8-K

  6/1/2018  
05/21/2019

10.1
10.2

06/16/2020

10.1

05/25/2021

10.1

8-K

  6/1/2018  

10.2

8-K

  6/1/2018  

10.3

8-K

 10/12/2018 

10.4

8-K

 05/25/2021 

10.4

10-Q

 11/07/2019 

10.4

10-Q

11/07/2019

10.5

10-Q

05/08/2020

10.3

10-Q

05/08/2020

10.4

10-Q

05/08/2020

10.5

8-K
S-3

02/17/2021
08/28/2020

10.1
1.2

X

X
X

X
X

X

X

X

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Registrant’s
Form

Dated

Exhibit
No.

Filed
Herewith

Exhibit
Number  

of the Sarbanes-Oxley Act of 2002.

Description of Document

101.INS   Inline XBRL Instance Document.
101.SCH  Inline XBRL Taxonomy Extension Schema Document.
101.CAL  Inline XBRL Taxonomy Extension Calculation Linkbase 

Document.

101.DEF  Inline XBRL Taxonomy Extension Definitions Linkbase 

Document.

101.LAB  Inline XBRL Taxonomy Extension Label Linkbase 

Document.

101.PRE  Inline XBRL Taxonomy Extension Presentation Linkbase 

104

Document.
Cover Page Interactive Data File (embedded within the 
Inline XBRL document).

* Certain  information  in  this  exhibit  has  been  omitted  and  filed  separately  with  the  Securities  and  Exchange 

Commission pursuant to a confidential treatment request.
The schedules to this exhibit have been omitted pursuant to Item 601(a)(5) of Regulation S-K.
Portions of this exhibit have been omitted pursuant to Item 601(b)(10)(iv) of Regulation S-K.
Represents management contracts or compensatory plans or arrangements.

†
‡
#
** The certifications attached as Exhibits 32.1 and 32.2 that accompany this Annual Report on Form 10-K are to 
be deemed furnished and shall not be deemed “filed” with the SEC and are not to be incorporated by reference 
into any filing of Assembly Biosciences, Inc. under the Securities Act of 1933, as amended, or the Securities 
Exchange Act of 1934, as amended, whether made before or after the date of this Annual Report on Form 10-K, 
irrespective of any general incorporation language contained in such filing.

Item 16.  Form 10-K Summary.

None.

56

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
In accordance with Section 13 or 15(d) of the Securities Exchange Act, the Registrant caused this report to be signed 
on its behalf by the undersigned, thereunto duly authorized.

SIGNATURES

Date: March 11, 2022

ASSEMBLY BIOSCIENCES, INC.

/s/ John G. McHutchison, A.O., M.D.

By:
Name:John G. McHutchison, A.O., M.D.
Title: Chief Executive Officer and President

POWER OF ATTORNEY

KNOW ALL PERSONS BY THESE PRESENTS, that each person whose signature appears below constitutes and 
appoints John G. McHutchison, A.O., M.D. and Jason A. Okazaki, jointly and severally, his or her attorneys-in-fact, 
each with the power of substitution, for him or her in any and all capacities, to sign any amendments to this report, 
and  to  file  the  same,  with  exhibits  thereto  and  other  documents  in  connection  therewith  with  the  Securities  and 
Exchange  Commission,  hereby  ratifying  and  confirming  all  that  each  of  said  attorneys-in-fact,  or  his  or  her 
substitute or substitutes may do or cause to be done by virtue hereof.

Pursuant to the requirements of the Securities Exchange Act of 1934, this report has been signed by the following 
persons on behalf of the registrant in the capacities and on the dates indicated.

Signature

Title

/s/ John G. McHutchison, A.O., M.D.  Chief Executive Officer, President and Director
John G. McHutchison, A.O., M.D.

  (Principal Executive Officer)

Date

  March 11, 2022

/s/ Michael P. Samar
Michael P. Samar

/s/ William R. Ringo, Jr.
William R. Ringo, Jr.

/s/ Anthony E. Altig
Anthony E. Altig

/s/ Gina Consylman
Gina Consylman

/s/ Richard D. DiMarchi, Ph.D.
Richard D. DiMarchi, Ph.D.

/s/ Myron Z. Holubiak
Myron Z. Holubiak

/s/ Sir Michael Houghton, Ph.D.
Sir Michael Houghton, Ph.D.

/s/ Lisa R. Johnson-Pratt, M.D.
Lisa R. Johnson-Pratt, M.D.

/s/ Susan Mahony, Ph.D.
Susan Mahony, Ph.D.

  Chief Financial Officer
  (Principal Financial and Principal Accounting Officer)

  March 11, 2022

  Chairman of the Board

  March 11, 2022

  March 11, 2022

  March 11, 2022

  March 11, 2022

  March 11, 2022

  March 11, 2022

  March 11, 2022

  March 11, 2022

  Director

  Director

  Director

  Director

  Director

  Director

  Director

57

 
 
 
 
 
 
 
 
 
 
 
 
 
   
 
 
 
 
 
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
 
 
 
 
 
   
   
   
   
 
 
 
 
[This page intentionally left blank] 

ASSEMBLY BIOSCIENCES, INC.
FINANCIAL STATEMENTS

Report of Independent Registered Public Accounting Firm ..............................................................................

Consolidated Balance Sheets as of December 31, 2021 and 2020.....................................................................

Consolidated Statements of Operations and Comprehensive Loss for the Years Ended December 31, 2021 
and 2020 .............................................................................................................................................................

Consolidated Statements of Changes in Stockholders’ Equity for the Years Ended December 31, 2021 and 
2020....................................................................................................................................................................

Consolidated Statements of Cash Flows for the Years Ended December 31, 2021 and 2020 ..........................

Notes to Consolidated Financial Statements ......................................................................................................

Page

F-2

F-5

F-6

F-7

F-8

F-9

F-1

 
 
 
 
 
 
 
 
Report of Independent Registered Public Accounting Firm

To the Stockholders and the Board of Directors of Assembly Biosciences, Inc.

Opinion on the Financial Statements 

We have audited the accompanying consolidated balance sheets of Assembly Biosciences, Inc. (the Company) as of 
December 31, 2021 and 2020, the related consolidated statements of operations and comprehensive loss, changes 
in stockholders’ equity and cash flows for each of the two years in the period ended December 31, 2021, and the 
related notes (collectively referred to as the “consolidated financial statements”). In our opinion, the consolidated 
financial statements present fairly, in all material respects, the financial position of the Company at December 31, 
2021 and 2020, and the results of its operations and its cash flows for each of the two years in the period ended 
December 31, 2021, in conformity with U.S. generally accepted accounting principles. 

Basis for Opinion

These financial statements are the responsibility of the Company‘s management. Our responsibility is to express an 
opinion on the Company’s financial statements based on our audits. We are a public accounting firm registered 
with the Public Company Accounting Oversight Board (United States) (PCAOB) and are required to be independent 
with respect to the Company in accordance with the U.S. federal securities laws and the applicable rules and 
regulations of the Securities and Exchange Commission and the PCAOB. 

We conducted our audits in accordance with the standards of the PCAOB. Those standards require that we plan 
and perform the audit to obtain reasonable assurance about whether the financial statements are free of material 
misstatement, whether due to error or fraud. The Company is not required to have, nor were we engaged to 
perform, an audit of its internal control over financial reporting. As part of our audits we are required to obtain an 
understanding of internal control over financial reporting but not for the purpose of expressing an opinion on the 
effectiveness of the Company's internal control over financial reporting. Accordingly, we express no such opinion.

Our audits included performing procedures to assess the risks of material misstatement of the financial 
statements, whether due to error or fraud, and performing procedures that respond to those risks. Such 
procedures included examining, on a test basis, evidence regarding the amounts and disclosures in the financial 
statements. Our audits also included evaluating the accounting principles used and significant estimates made by 
management, as well as evaluating the overall presentation of the financial statements. We believe that our audits 
provide a reasonable basis for our opinion. 

Critical Audit Matters 

The critical audit matters communicated below are matters arising from the current period audit of the financial 
statements that were communicated or required to be communicated to the audit committee and that: (1) relate 
to accounts or disclosures that are material to the financial statements and (2) involved our especially challenging, 
subjective or complex judgments. The communication of critical audit matters does not alter in any way our 
opinion on the consolidated financial statements, taken as a whole, and we are not, by communicating the critical 
audit matters below, providing separate opinions on the critical audit matters or on the accounts or disclosures to 
which they relate. 

F-2

Description of 
the Matter

How We 
Addressed the 
Matter in Our 
Audit

Accrued research and development expenses

For the year ended December 31, 2021, the Company incurred $68.5 million of research and 
development expenses and recorded $3.4 million of accrued research and development 
expenses at December 31, 2021. As described in Note 2 to the consolidated financial 
statements, the Company’s accrued research and development expenses are based on 
estimates of the services received and efforts expended pursuant to contracts with multiple 
contract research organizations (CROs) and manufacturing vendors that conduct and manage 
these activities on its behalf. When billing terms under such contracts do not coincide with the 
timing of when the work is performed, management is required to make estimates of 
outstanding obligations to those third parties as of period end. The accrual is based on a 
number of factors, including the time period over which services will be performed, enrollment 
of subjects, number of sites activated, and the level of effort to be expended in each period. At 
period end, accrued research and development expenses are recorded based upon estimates of 
the proportion of work completed over the term of the individual clinical trial and 
manufacturing activities in accordance with signed agreements with the third parties. If 
possible, the Company obtains information regarding unbilled services directly from these 
service providers and performs procedures to challenge these estimates based on their internal 
understanding of the services provided to date. However, the Company may also be required to 
estimate these services based on information available to its internal clinical or administrative 
staff if such information is not able to be obtained timely from its services providers.

Auditing accrued research and development expenses is complex because of the judgments 
applied by management to determine the commencement and completion date of vendor 
tasks and the cost and extent of work performed during the reporting period for services not 
yet billed by contracted third-party vendors. The testing of the Company’s accrued research 
and development expense models also involves a high level of effort to test the high volume of 
data used to determine the estimated accrual.

To test the completeness of accrued research and development expenses, we performed audit 
procedures that included, among others, direct confirmation of contract terms and conditions 
with a sample of the Company’s third-party vendors. We also confirmed the progress of 
contracted clinical activities with these third-party vendors and compared such data to the 
Company’s estimates of progress as reflected in their accrual models. We further tested the 
accuracy of the calculations, the completeness of the data utilized, and the reasonableness of 
the assumptions used in management’s accrual models by testing actual invoices paid to date, 
agreeing inputs back to contractual terms and holding discussions with clinical or administrative 
staff outside of the finance function. Procedures were performed to evaluate the reliability, 
completeness and relevance of management’s data by testing actual invoices paid and holding 
discussions with clinical or administrative staff outside of the finance function to corroborate 
progress and estimated level of expended effort incurred by the Company’s third-party 
vendors.   Further, we inspected material invoices received from third parties after the balance 
sheet date and evaluated whether services performed prior to the consolidated balance sheet 
date had been properly included in the accrual.

F-3

Impairment of goodwill and indefinite-lived intangible asset

Description of 
the Matter

As discussed in Note 2 of the consolidated financial statements, both goodwill and the 
indefinite-lived intangible asset are tested for impairment at least annually. To determine the 
estimated fair value of the Company’s single reporting unit and the indefinite-lived intangible 
asset included within it, management considered both market and income valuation 
approaches. As further discussed in Note 5, in the fourth quarter of 2021 the Company recorded 
impairment of goodwill and IPR&D of $12.6 million and $29.0 million, respectively.

Auditing management’s impairment tests for goodwill and its indefinite-lived intangible asset 
was complex and highly judgmental due to the significant assumptions used in determining the 
fair value of the Company’s single reporting unit and the indefinite-lived intangible asset 
included within it. Significant assumptions used include (i) estimating the expected timing and 
amount of projected future revenues; (ii) costs to complete the in-process research and 
development; and (iii) the discount rates used to estimate future cash flows which are affected 
by probabilities of technical success.

How We 
Addressed the 
Matter in Our 
Audit

To test the estimated fair value of the single reporting unit and the indefinite-lived intangible 
asset included within it, we performed audit procedures that included, among others, assessing 
the methodologies used by the Company, comparing the significant assumptions to current 
industry peers and economic trends, historical financial results, and other relevant factors that 
would affect the significant assumptions. We involved valuation specialists to assist with 
assessing the methodologies and evaluating certain significant assumptions described above, 
such as projected future revenues, costs to complete the in-process research and development 
project and the discount rates. We also performed sensitivity analyses of significant assumptions 
to evaluate the changes in the fair value of the reporting unit and indefinite-lived intangible 
asset that would result from changes in the assumptions.

/s/ Ernst & Young LLP
We have served as the Company’s auditor since 2015.
Redwood City, California
March 11, 2022

F-4

ASSEMBLY BIOSCIENCES, INC.
CONSOLIDATED BALANCE SHEETS
(In thousands except for share amounts and par value)

ASSETS
Current assets

Cash and cash equivalents ...........................................................................................................   $
Marketable securities - short-term...............................................................................................  
Accounts receivable from collaborations ....................................................................................  
Prepaid expenses and other current assets...................................................................................  
Total current assets.............................................................................................................................  

Marketable securities - long-term................................................................................................  
Property and equipment, net........................................................................................................  
Operating lease right-of-use (ROU) assets..................................................................................  
Other assets..................................................................................................................................  
Indefinite-lived intangible asset ..................................................................................................  
Goodwill ......................................................................................................................................  
Total assets ........................................................................................................................................   $

LIABILITIES AND STOCKHOLDERS' EQUITY
Current liabilities

Accounts payable.........................................................................................................................   $
Accrued research and development expenses .............................................................................  
Other accrued expenses ...............................................................................................................  
Operating lease liabilities - short-term ........................................................................................  
Total current liabilities .......................................................................................................................  

Deferred tax liabilities .................................................................................................................  
Deferred revenue .........................................................................................................................  
Operating lease liabilities - long-term .........................................................................................  
Total liabilities ..................................................................................................................................  

Commitments and contingencies

Stockholders' equity

As of December 31,

2021

2020

45,627    $
101,000   
336   
7,241   
154,204   

27,972   
1,139   
6,042   
1,703   
—   
—   

191,060    $

2,659    $
3,400   
6,863   
3,151   
16,073   

—   
2,733   
3,325   
22,131   

59,444 
156,969 
1,230 
6,850 
224,493 

— 
1,600 
9,131 
6,392 
29,000 
12,638 
283,254 

4,598 
4,444 
11,987 
3,404 
24,433 

2,531 
8,987 
6,725 
42,676 

Preferred stock, $0.001 par value; 5,000,000 shares authorized; no shares issued or 
outstanding ..................................................................................................................................  
Common stock, $0.001 par value; 100,000,000 shares authorized as of December 31, 2021 
and December 31, 2020; 48,120,437 and 34,026,680 shares issued and outstanding as of 
December 31, 2021 and December 31, 2020, respectively .........................................................  
Additional paid-in capital ............................................................................................................  
Accumulated other comprehensive loss ......................................................................................  
Accumulated deficit.....................................................................................................................  
Total stockholders' equity............................................................................................................  
Total liabilities and stockholders' equity........................................................................................   $

—   

— 

48   
800,728   
(419)  
(631,428)  
168,929   
191,060    $

34 
742,387 
(270)
(501,573)
240,578 
283,254  

See Accompanying Notes to the Consolidated Financial Statements 

F-5

 
 
 
 
 
 
 
 
 
   
   
   
 
 
   
   
   
 
 
 
 
 
 
 
 
 
 
 
 
    
 
  
 
 
 
 
 
 
 
 
 
 
 
 
 
 
   
   
   
 
 
   
   
   
 
 
   
   
   
 
 
 
 
 
 
 
 
 
 
 
 
    
 
  
 
 
 
 
 
 
 
 
 
 
   
   
   
 
 
   
   
   
 
 
 
   
   
   
 
 
   
   
   
 
 
 
 
 
 
 
 
 
 
 
 
 
ASSEMBLY BIOSCIENCES, INC. 
CONSOLIDATED STATEMENTS OF OPERATIONS AND COMPREHENSIVE LOSS 
(In thousands except for share and per share amounts)

Year ended December 31,
2020
2021

Collaboration revenue ........................................................................................  $

6,254    $

79,105 

Operating expenses

Research and development..............................................................................   
General and administrative..............................................................................   
Impairment of goodwill and indefinite-lived intangible asset ........................   
Total operating expenses ......................................................................................   
Loss from operations ..........................................................................................   

68,524     
28,780     
41,638     
138,942     
(132,688)    

Other income

Interest and other income, net .........................................................................   
Total other income................................................................................................   
Loss before income taxes....................................................................................   

302     
302     
(132,386)    

Income tax benefit ................................................................................................   
Net loss .................................................................................................................  $

2,531     
(129,855)   $

106,823 
37,058 
— 
143,881 
(64,776)

2,624 
2,624 
(62,152)

— 
(62,152)

Other comprehensive loss

Unrealized loss on marketable securities ........................................................   
Comprehensive loss ............................................................................................  $

(149)    
(130,004)   $

(69)
(62,221)

Net loss per share, basic and diluted.....................................................................  $
Weighted average common shares outstanding, basic and diluted.......................   

(3.00)   $
43,280,383     

(1.75)
35,427,120  

See Accompanying Notes to the Consolidated Financial Statements 

F-6

 
 
 
 
 
   
 
 
   
      
  
   
      
  
 
   
      
  
   
      
  
 
   
      
  
 
   
      
  
   
      
  
 
   
      
  
ASSEMBLY BIOSCIENCES, INC. 
CONSOLIDATED STATEMENTS OF CHANGES IN STOCKHOLDERS’ EQUITY 
(In thousands except for share amounts)

Common Stock

Shares

Amount

Additional
Paid-in
Capital

Accumulated
Other

Comprehensive     Accumulated    

Loss

Deficit

Total
Stockholders'
Equity

32     $

712,807     $

(201 )   $

(439,421 )   $

273,217  

86,812      

892,840      

175,579      

Balance as of December 31, 2019.......................     32,558,307     $
Issuance of common stock under ATM equity 
offering program, net of issuance costs ................    
Issuance of common stock upon exercise of 
stock options .........................................................    
Issuance of common stock under Employee 
Stock Purchase Plan (ESPP) .................................    
Issuance of common stock for settlement of 
313,142      
restricted stock units (RSUs) ................................    
—      
Unrealized loss on marketable debt securities......    
—      
Stock-based compensation....................................    
Net loss .................................................................    
—      
Balance as of December 31, 2020.......................     34,026,680     $
Issuance of common stock under ATM equity 
offering program, net of issuance costs ................     11,234,207      
Issuance of common stock under ESPP................    
88,820      
Issuance of common stock for settlement of 
RSUs .....................................................................    
Issuance of common stock upon cashless 
2,423,634      
exercise of pre-funded warrants............................    
—      
Unrealized loss on marketable debt securities......    
—      
Stock-based compensation....................................    
Net loss .................................................................    
—      
Balance as of December 31, 2021.......................     48,120,437     $

347,096      

1      

1      

5,451      

1,466      

—      

680      

—      
—      
—      
—      
34     $

11      
—      

1      

—      
—      
21,983      
—      
742,387     $

52,795      
258      

(1 )    

—      

—      

—      

—      
(69 )    
—      
—      
(270 )   $

—      
—      

—      

—      

—      

—      

—      
—      
—      
(62,152 )    
(501,573 )   $

—      
—      

—      

—      
—      
—      
(129,855 )    
(631,428 )   $

5,452  

1,467  

680  

—  
(69 )
21,983  
(62,152 )
240,578  

52,806  
258  

—  

—  
(149 )
5,291  
(129,855 )
168,929  

2      
—      
—      
—      
48     $
See Accompanying Notes to the Consolidated Financial Statements

(2 )    
—      
5,291      
—      
800,728     $

—      
(149 )    
—      
—      
(419 )   $

F-7

 
 
   
   
 
 
 
   
   
   
   
   
 
ASSEMBLY BIOSCIENCES, INC. 
CONSOLIDATED STATEMENTS OF CASH FLOWS
(In thousands)

Cash flows from operating activities
Net loss ..............................................................................................................................  $
Adjustments to reconcile net loss to net cash used in operating activities:

Impairment of goodwill and indefinite-lived intangible asset.....................................
Depreciation and amortization ....................................................................................
Non-cash in-process research and development (IPR&D) expense............................
Stock-based compensation ..........................................................................................
Net accretion and amortization of investments in marketable debt securities ............
Non-cash rent expense.................................................................................................
Deferred income tax benefit ........................................................................................
Loss on disposal of property and equipment...............................................................
Gain on the sale of Microbiome assets........................................................................
Changes in operating assets and liabilities:

Accounts receivable from collaboration ...............................................................
Prepaid expenses and other current assets.............................................................
Other assets ...........................................................................................................
Accounts payable ..................................................................................................
Accrued research and development expenses .......................................................
Other accrued expenses .........................................................................................
Deferred revenue ...................................................................................................
Operating lease liabilities ......................................................................................
Net cash used in operating activities ................................................................................. 

Cash flows from investing activities

Purchases of property and equipment ...................................................................
Proceeds from sale of property and equipment .....................................................
Purchase of IPR&D from an acquisition of assets ................................................
Proceeds from the sale of Microbiome assets .......................................................
Purchases of marketable securities........................................................................
Proceeds from maturities of marketable securities ...............................................
Proceeds from sale of marketable securities .........................................................
Net cash provided by investing activities.......................................................................... 

Cash flows from financing activities

Proceeds from the issuance of common stock under ATM equity offering 
program, net of issuance costs...............................................................................
Proceeds from the issuance of common stock under ESPP .................................. 
Proceeds from the exercise of stock options ......................................................... 
Net cash provided by financing activities ......................................................................... 

Net increase (decrease) in cash and cash equivalents ....................................................... 
Cash and cash equivalents at the beginning of the period................................................. 
Cash and cash equivalents at the end of the period .....................................................  $
Supplemental non-cash investing and financing activities
Operating lease liabilities arising from obtaining ROU assets..........................................  $
Remeasurement of lease liabilities arising from modification of ROU assets..................  $
Receivable from sale of Microbiome assets included in prepaid expenses and other 
current assets .....................................................................................................................  $

Year Ended December 31,
2020
2021

(129,855)   $

(62,152)

41,638   
466   
—   
5,237   
586   
3,840   
(2,531)  
1,624   
(3,000)  

894   
1,109   
4,689   
(1,939)  
(1,044)  
(5,070)  
(6,254)  
(3,786)  
(93,396)  

(3,096)  
857   
—   
1,500   
(160,446)  
175,200   
12,500   
26,515   

52,806   
258   
—   
53,064   

(13,817)  
59,444   
45,627    $

126    $
(788)   $

(1,500)   $

— 
691 
1,750 
21,853 
(13)
5,214 
— 
9 
— 

2,144 
(1,487)
(4,708)
2,867 
(382)
3,831 
(28,061)
(4,513)
(62,957)

(470)
— 
(1,750)
— 
(193,188)
221,617 
41,861 
68,070 

5,452 
680 
1,467 
7,599 

12,712 
46,732 
59,444 

1,302 
— 

—  

See Accompanying Notes to the Consolidated Financial Statements

F-8

 
 
 
 
 
   
 
 
 
    
 
  
 
 
    
 
  
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
    
 
  
  
 
  
 
  
 
  
 
  
 
  
 
  
 
  
 
 
 
 
 
 
    
 
  
 
 
    
 
  
  
 
  
 
  
 
  
 
  
 
  
 
  
 
 
 
 
 
 
    
 
  
 
 
    
 
  
  
 
 
 
 
 
 
 
 
 
 
    
 
  
 
 
 
 
 
 
    
 
  
ASSEMBLY BIOSCIENCES, INC. 
Notes to Consolidated Financial Statements

Note 1 - Nature of Business

Overview

Assembly Biosciences, Inc., together with its subsidiaries (Assembly or the Company), incorporated in Delaware in 
October  2005, is  a  clinical-stage  biotechnology  company  focused  on  discovery  and  development  of  novel 
therapeutics for the treatment of hepatitis B virus (HBV) infection and other viral diseases. The Company operates 
in one segment and is headquartered in South San Francisco, California, with operations in California and China. 
Prior to the Company’s wind-down of its Microbiome program in January 2021, the Company also had operations in 
Connecticut.

The  Company’s  research  and  development  programs  are  pursuing  multiple  drug  candidates  that  inhibit  the  HBV 
replication cycle and block the generation of covalently closed circular DNA (cccDNA), with the aim of discovering 
and developing finite and curative therapies for patients with HBV. The Company has discovered several novel core 
inhibitors, which are small molecules that directly target and allosterically modify the HBV core (HBc) protein in a 
way that affects assembly and stability of HBV nucleocapsids.

Liquidity

The Company has not derived any revenue from product sales to date and currently has no approved products. Once 
a product has been developed, it will need to be approved for sale by the U.S. Food and Drug Administration (FDA) 
or an applicable foreign regulatory agency. Since inception, the Company’s operations have been financed primarily 
through the sale of equity securities, the proceeds from the exercise of warrants and stock options, the issuance of 
debt, and upfront payments related to collaboration agreements. The Company has incurred losses from operations 
since  inception  and  expects  to  continue  to  incur  substantial  losses  for  the  next  several  years  as  it  continues  its 
product development efforts. Management believes the Company currently has sufficient funds to meet its operating 
requirements for at least the next twelve months following the date that these consolidated financial statements are 
issued.  If  the  Company  cannot  generate  significant  cash  from  its  operations,  it  intends  to  obtain  any  additional 
funding  it  requires  through  strategic  relationships,  public  or  private  equity  or  debt  financings,  grants  or  other 
arrangements (see  Note  8  for  recent  sales  of  common  stock).  The  Company  cannot  assure  such  funding  will  be 
available on reasonable terms, if at all. Market volatility resulting from the novel coronavirus disease (COVID-19) 
pandemic or other factors could also adversely impact the Company’s ability to access capital when and as needed.

If the Company is unable to generate enough revenue from its collaborations, secure additional sources of funding or 
receive  full  and  timely  collections  of  amounts  due,  it  may  be  necessary  to  significantly  reduce  the  current  rate  of 
spending  through  reductions  in  staff  and  delaying,  scaling  back,  or  stopping  certain  research  and  development 
programs, including more costly clinical trials.

Note 2 - Summary of Significant Accounting Policies and Recent Accounting Pronouncements

Basis of Presentation

These  consolidated  financial  statements  have  been  prepared  in  accordance  with  accounting  principles  generally 
accepted  in  the  United  States  (U.S.  GAAP)  and  include  the  accounts  of  the  Company  and  its  wholly  owned 
subsidiaries. All intercompany balances and transactions have been eliminated in consolidation.

Use of Estimates

The preparation of consolidated financial statements in conformity with U.S. GAAP requires management to make 
estimates and assumptions that may affect the reported amounts of assets and liabilities and disclosure of contingent 
assets and liabilities at the date of the financial statements and reported amounts of expenses during the reporting 
period. Actual results could differ from those estimates.

Significant  estimates  inherent  in  the  preparation  of  the  accompanying  consolidated  financial  statements  include 
estimates of costs incurred but not yet invoiced for research and development accruals, the estimated fair value of 

F-9

our  indefinite-lived  intangible  asset  and  the  estimated  fair  value  of  our  reporting  unit  for  purposes  of  evaluating 
goodwill impairment.

The  Company’s  estimates  could  be  affected  by  external  conditions,  including  those  unique  to  the  Company  and 
general  economic  conditions.  It  is  reasonably  possible  that  these  external  factors  could  have  an  effect  on  the 
Company’s estimates and could cause actual results to differ from those estimates and assumptions.

Other Risks and Uncertainties

In March 2020, the World Health Organization declared the COVID-19 outbreak a pandemic. The ongoing COVID-
19 pandemic and its broad, global impacts, including supply chain disruptions, have impacted certain aspects of the 
Company’s business, including where and how the Company’s employees work in its labs and offices and how and 
when the Company’s nonclinical and clinical studies are conducted. Early in the pandemic, the Company’s current 
and future planned clinical trials and preclinical studies were largely unaffected, but as the pandemic has continued, 
the Company has experienced enrollment delays for its current clinical studies, particularly its two ongoing multi-
drug  combination  studies.  However,  the  Company  cannot  at  this  time  predict  the  specific  extent,  duration,  or  full 
impact  the  COVID-19  pandemic  will  have  on  its  business,  operations,  strategy,  prospects  and  financial  condition 
and results. The impact of the COVID-19 pandemic on the Company’s financial performance will depend on future 
developments,  including  the  duration  and  spread  of  the  outbreak  and  related  governmental  advisories  and 
restrictions. These developments and the impact of the COVID-19 pandemic on the financial markets and the overall 
economy  are  highly  uncertain.  If  the  financial  markets  and/or  the  overall  economy  are  impacted  for  an  extended 
period, the Company’s results may be adversely affected.

In  addition,  the  study  design  of  an  upcoming  triple  combination  study  initially  included  a  site  in  Ukraine.  The 
Company will no longer be conducting the study there due to the instability resulting from Russia’s recent invasion 
of Ukraine. These changes to the Company’s study plan will result in a delayed data readout.

Cash and Cash Equivalents

All highly liquid investments, including money market funds, with original maturities of three months or less at the 
time of purchase are considered to be cash equivalents.  All of the Company’s cash equivalents have liquid markets 
and high credit ratings.  The Company maintains its cash in bank deposits and other accounts, the balances of which, 
at times as of and during the years ended December 31, 2021 and 2020, exceed federally insured limits.

Investments in Marketable Securities

The Company invests its excess cash in debt securities with high credit ratings including but not limited to money 
market funds classified as cash equivalents, asset backed securities, securities issued by the U.S. government and its 
agencies,  corporate  debt  securities  and  commercial  paper.  The  Company  has  designated  its  investments  in 
marketable securities as available-for-sale and measures these securities at their respective fair values. Marketable 
securities are classified as short-term or long-term based on the maturity date and their availability to meet current 
operating  requirements.  Marketable  securities  that  mature  in  one  year  or  less  from  the  consolidated  balance  sheet 
date are classified as short-term available-for-sale securities, while marketable securities with maturities in one year 
or beyond one year from the consolidated balance sheet date are classified as long-term.

Securities  that  are  classified  as  available-for-sale  are  measured  at  fair  value  with  temporary  unrealized  gains  and 
losses reported in other comprehensive loss, and as a component of stockholders' equity until their disposition. The 
Company reviews all available-for-sale securities at each period end to determine if they remain available-for-sale 
based on their current intent and ability to sell the security if it is required to do so. Realized gains and losses from 
the sale of marketable securities, if any, are calculated using the specific-identification method.

Marketable  securities  are  subject  to  a  periodic  impairment  review.  The  Company  may  recognize  an  impairment 
charge when a decline in the fair value of investments below the cost basis is determined to be other-than-temporary. 
In determining whether a decline in market value is other-than-temporary, various factors are considered, including 
the cause, duration of time and severity of the impairment, any adverse changes in the investees’ financial condition, 
and the Company’s intent and ability to hold the security for a period of time sufficient to allow for an anticipated 

F-10

recovery in market value. To date, there have been no declines in value deemed to be other than temporary for any 
of the Company’s investments in marketable securities.

Goodwill and Indefinite-Lived Intangible Asset

Goodwill  and  indefinite-lived  intangible  asset  are  reviewed  for  impairment  at  least  annually  in  the  fourth  quarter, 
and more frequently if events or other changes in circumstances indicate that the carrying amount of the assets may 
not be recoverable.

Goodwill

The difference between the purchase price and the fair value of assets acquired and liabilities assumed in a business 
combination is allocated to goodwill. Goodwill is evaluated for impairment on an annual basis as of October 1, and 
more frequently if indicators are present or changes in circumstances suggest impairment may exist. In performing 
each annual impairment assessment and any interim impairment assessment, the Company determines if it should 
qualitatively assess whether it is more likely than not the fair value of goodwill is less than its carrying amount (the 
qualitative impairment test). If the Company concludes it is more likely than not the fair value of the reporting unit 
is less than its carrying amount, or elect not to use the qualitative impairment test, a quantitative impairment test is 
performed.  The  Company’s  annual  or  interim  quantitative  impairment  testing  is  performed  by  comparing  the 
estimated fair value of the reporting unit to its carrying value. An impairment charge is recognized for the amount 
by which the carrying amount exceeds the reporting unit’s fair value, not to exceed the carrying value of goodwill.

Indefinite-Lived Intangible Asset

The Company’s indefinite-lived intangible asset consists of IPR&D associated with small molecule core inhibitors 
that directly target and allosterically inhibit core protein functions associated with HBV which were acquired with 
the acquisition of Assembly Pharmaceutics, Inc. in 2014. IPR&D represents the fair value assigned to incomplete 
research projects the Company acquired through a business combination which, at the time of acquisition, had not 
reached  technological  feasibility,  regardless  of  whether  they  had  alternative  future  use.  The  primary  basis  for 
determining the technological feasibility or completion of these projects is obtaining regulatory approval to market 
the underlying products in an applicable geographic region. The Company classifies IPR&D acquired in a business 
combination as an indefinite-lived intangible asset until the completion or abandonment of the associated research 
and  development  efforts.  Upon  completion  of  the  associated  research  and  development  efforts,  the  Company 
performed a final test for impairment and will determine the useful life of the technology and begin amortizing the 
assets to reflect their use over their remaining lives. Upon permanent abandonment, the Company would write-off 
the remaining carrying amount of the associated IPR&D intangible asset.

Indefinite-lived  intangible  assets  are  not  amortized,  but  instead  are  reviewed  for  impairment  at  least  annually,  or 
more frequently if events occur or circumstances change that would indicate the carrying amount may be impaired. 
In performing each annual impairment assessment and any interim impairment assessment, the Company determines 
if it should qualitatively assess whether it is more likely than not the fair value of its IPR&D asset is less than its 
carrying amount (the qualitative impairment test). If the Company concludes that is the case, or elects not to use the 
qualitative  impairment  test,  the  Company  would  proceed  with  quantitatively  determining  the  fair  value  of  the 
IPR&D asset and comparing its fair value to its carrying value to determine the amount of impairment, if any (the 
quantitative impairment test).

In  performing  the  qualitative  impairment  test,  the  Company  considers  the  results  of  the  most  recent  quantitative 
impairment  test  and  identifies  the  most  relevant  drivers  of  the  fair  value  for  the  IPR&D  asset.  The  most  relevant 
drivers of fair value identified are consistent with the assumptions used in the quantitative estimate of the IPR&D 
asset. Using these drivers of fair value, the Company identifies events and circumstances which may have an effect 
on the fair value of the IPR&D asset since the last time the IPR&D’s fair value was quantitatively determined. The 
Company then weighs these factors to determine and conclude if it is not more likely than not the IPR&D asset is 
impaired.  If  it  is  more  likely  than  not  the  IPR&D  asset  is  impaired,  the  Company  proceeds  with  quantitatively 
determining the fair value of the IPR&D asset.

When  performing  the  quantitative  impairment  test,  the  Company  uses  the  income  approach  to  determine  the  fair 
value of its IPR&D asset. This approach calculates fair value by estimating the after-tax cash flows attributable to an 

F-11

in-process project over its useful life and then discounting these after-tax cash flows back to a present value. This 
estimate includes judgmental assumptions regarding the estimates that market participants would make in evaluating 
the  IPR&D  asset,  including  the  probability  of  successfully  completing  clinical  trials  and  obtaining  regulatory 
approval to market the IPR&D asset, the timing of and the expected costs to complete IPR&D projects, future net 
cash  flows  from  potential  drug  sales,  which  are  based  on  estimates  of  the  sales  price  of  the  drug,  the  size  of  the 
patient population and cure rate, our competitive position in the marketplace, and appropriate discount and tax rates. 
Any  impairment  to  be  recorded  is  calculated  as  the  difference  between  the  estimated  fair  value  and  the  carrying 
value of the IPR&D asset on the Company’s consolidated balance sheet.

Leases

All of the Company’s leases are operating leases for facilities and equipment. The Company recognizes a lease asset 
for  its  right  to  use  the  underlying  asset  and  a  lease  liability  for  the  corresponding  lease  obligation.  The  Company 
determines  whether  an  arrangement  is  or  contains  a  lease  at  contract  inception.  Operating  leases  with  a  duration 
greater than one year are included in operating lease right-of-use assets, operating lease liabilities - short-term, and 
operating  lease  liabilities -  long-term  in  the  Company’s  consolidated  balance  sheets.  Operating  lease  right-of-use 
assets and liabilities are recognized at the lease commencement date based on the present value of lease payments 
over  the  lease  term.  In  determining  the  net  present  value  of  lease  payments,  the  Company  uses  its  incremental 
borrowing rate based on the information available at the lease commencement date. The incremental borrowing rate 
represents the interest rate the Company would incur at lease commencement to borrow an amount equal to the lease 
payments  on  a  collateralized  basis  over  the  term  of  a  lease.  The  Company  considers  a  lease  term  to  be  the 
noncancelable period that it has the right to use the underlying asset, including any periods where it is reasonably 
assured  the  Company  will  exercise  the  option  to  extend  the  contract.  Periods  covered  by  an  option  to  extend  are 
included in the lease term if the lessor controls the exercise of that option. 

The operating lease right-of-use assets also include any lease payments made and exclude lease incentives. Lease 
expense  is  recognized  on  a  straight-line  basis  over  the  expected  lease  term.  Variable  lease  expenses  are  recorded 
when incurred. The Company has elected not to separate lease and non-lease components for its leased assets and 
accounts for all lease and non-lease components of its agreements as a single lease component.

Impairment of Long-Lived Assets

The Company monitors the carrying value of long-lived assets, including ROU operating lease assets, for potential 
impairment and tests the recoverability of such assets whenever events or changes in circumstances indicate that the 
carrying  amounts  may  not  be  recoverable.  If  a  change  in  circumstance  occurs,  the  Company  performs  a  test  of 
recoverability by comparing the carrying value of the asset or asset group to its undiscounted expected future cash 
flows.  If  cash  flows  cannot  be  separately  and  independently  identified  for  a  single  asset,  the  Company  will 
determine  whether  impairment  has  occurred  for  the  group  of  assets  for  which  the  Company  can  identify  the 
projected cash flows. If the carrying values are in excess of undiscounted expected future cash flows, the Company 
measures any impairment by comparing the fair value of the asset or asset group to its carrying value. In conjunction 
with the decision to wind down the Microbiome program in December 2020, the Company evaluated its ROU assets 
and  property  and  equipment  used  in  the  Microbiome  program  for  impairment.  The  Company  determined  the 
carrying value was no longer recoverable and, based on the fair value of the assets determined from market quotes, 
recorded an impairment loss of $0.7 million included in research and development expenses in 2020. There were no 
indicators of impairment of long-lived assets during the year ended December 31, 2021.

Property and Equipment, Net

Property  and  equipment  are  stated  at  cost  and  consist  of  lab  and  office  equipment,  leasehold  improvements  and 
computer  hardware  and  software.  The  Company  records  depreciation  under  the  straight-line  method  over  the 
estimated useful lives of its property and equipment ranging from three to seven years.

Leasehold improvements are amortized over the remaining terms of the respective leases or the estimated useful life 
of the leasehold improvements, whichever is less. Maintenance and repair costs are expensed as incurred.

Fair Value Measurements

The  Company  follows  accounting  guidance  on  fair  value  measurements  for  financial  instruments  measured  on  a 
recurring basis, as well as for certain assets and liabilities that are initially recorded at their estimated fair values. 

F-12

Fair value is defined as the exit price, or the amount that would be received from selling an asset or paid to transfer a 
liability  in  an  orderly  transaction  between  market  participants  at  the  measurement  date.  The  Company  uses  the 
following three-level hierarchy that maximizes the use of observable inputs and minimizes the use of unobservable 
inputs to value its financial instruments:

Level 1: Observable inputs such as unadjusted quoted prices in active markets for identical instruments.

Level 2: Quoted prices for similar instruments that are directly or indirectly observable in the marketplace.

Level  3:  Significant  unobservable  inputs  which  are  supported  by  little  or  no  market  activity  and  that  are 
financial instruments whose values are determined using pricing models, discounted cash flow methodologies, 
or  similar  techniques,  as  well  as  instruments  for  which  the  determination  of  fair  value  requires  significant 
judgment or estimation.

Financial instruments measured at fair value are classified in their entirety based on the lowest level of input that is 
significant to the fair value measurement. The assessment of the significance of a particular input to the fair value 
measurement in its entirety requires the Company to make judgments and consider factors specific to the asset or 
liability. The use of different assumptions and/or estimation methodologies may have a material effect on estimated 
fair values. Accordingly, the fair value estimates disclosed or initial amounts recorded may not be indicative of the 
amount the Company or holders of the instruments could realize in a current market exchange.

The carrying amounts of cash equivalents and marketable securities approximate their fair value based upon quoted 
market prices. Certain of the Company’s financial instruments are not measured at fair value on a recurring basis but 
are  recorded  at  amounts  which  approximate  their  fair  value  due  to  their  liquid  or  short-term  nature,  such  as  cash, 
accounts receivable, accounts payable and accrued expenses.   

The following tables present the fair value of the Company’s financial assets measured at fair value on a recurring 
basis using the above input categories (in thousands):

Cash equivalents

Money market fund ................................................  $
Total cash equivalents..................................................   
Short-term marketable securities

U.S. and foreign corporate debt securities .............   
Asset-backed securities ..........................................   
U.S. and foreign commercial paper........................   
Total short-term marketable securities.........................   
Long-term marketable securities

U.S. and foreign corporate debt securities .............   
U.S. treasury securities ...........................................   
Total long-term marketable securities .........................   
Total assets measured at fair value ..............................  $

Level 1

Level 2

Level 3

Fair Value

December 31, 2021

42,507    $
42,507   

—    $
—     

—    $
—     

42,507 
42,507 

—   
—   
—   
—   

7,013     
29,059     
64,928     
101,000     

—   
—   
—   
42,507    $

19,043     
8,929     
27,972     
128,972    $

—     
—     
—     
—     

—     
—     
—     
—    $

7,013 
29,059 
64,928 
101,000 

19,043 
8,929 
27,972 
171,479  

F-13

 
 
 
 
 
   
   
   
 
     
   
   
       
       
 
 
   
    
 
      
      
  
 
 
 
 
   
    
 
      
      
  
 
 
 
Level 1

Level 2

Level 3

Fair Value

December 31, 2020

Cash equivalents

Money market fund ................................................  $
U.S. and foreign commercial paper........................   
Total cash equivalents..................................................   

Short-term marketable securities
U.S. and foreign corporate debt securities .............   
Asset-backed securities ..........................................   
U.S. treasury securities ...........................................   
U.S. and foreign commercial paper........................   
Total short-term marketable securities.........................   
Total assets measured at fair value ..............................  $

47,553    $
—   
47,553   

—   
—   
—   
—   
—   
47,553    $

—    $
6,498     
6,498     

16,939     
12,675     
23,999     
103,356     
156,969     
163,467    $

—    $
—     
—     

—     
—     
—     
—     
—     
—    $

47,553 
6,498 
54,051 

16,939 
12,675 
23,999 
103,356 
156,969 
211,020  

Money  market  funds  are  highly  liquid  and  actively  traded  marketable  securities  that  generally  transact  at  a  stable 
$1.00  net  asset  value  representing  its  estimated  fair  value.  The  Company  estimates  the  fair  value  of  its  U.S.  and 
foreign corporate debt securities, asset backed securities, U.S. treasury securities and U.S. and foreign commercial 
paper by taking into consideration valuations obtained from third-party pricing services. The pricing services utilize 
industry standard valuation models, including both income and market-based approaches, for which all significant 
inputs are observable, either directly or indirectly, to estimate fair value. These inputs include reported trades of and 
broker/dealer  quotes  on 
issuer  credit  spreads;  benchmark  securities; 
prepayment/default projections based on historical data; and other observable inputs.

the  same  or  similar  securities, 

During the quarter ended December 31, 2021, there was a triggering event that required the Company to perform an 
impairment  analysis  for  both  its  goodwill  and  indefinite-lived  asset. As  a  result,  the  Company  recognized  an 
impairment charge of $41.6 million for its goodwill and indefinite-lived asset. The Company considers the fair value 
used  to  determine  the  impairment  charge  to  be  a  Level  3  measurement.  See  additional  discussion  relating  to  the 
Company’s impairment of goodwill and indefinite-lived asset in Note 5.

There have been no transfers between Level 1, Level 2 or Level 3 for any of the periods presented. See Note 3 for 
further information regarding the carrying value of the Company’s investments in marketable securities.

Revenue Recognition and Accounts Receivable from Collaborations

The Company analyzes its collaboration arrangements to assess whether such arrangements, or transactions between 
arrangement participants, involve joint operating activities performed by parties that are both active participants in 
the activities and exposed to significant risks and rewards dependent on the commercial success of such activities or 
are  more  akin  to  a  vendor-customer  relationship.  In  making  this  evaluation,  the  Company  considers  whether  the 
activities of the collaboration are considered to be distinct and deemed to be within the scope of the collaborative 
arrangement accounting standard and those that are more reflective of a vendor-customer relationship and, therefore, 
within the scope of the revenue with contracts with customers accounting standard. This assessment is performed 
throughout the life of the arrangement based on changes in the responsibilities of all parties in the arrangement.

For elements of collaboration arrangements that are not accounted for pursuant to the revenue from contracts with 
customers accounting standard, an appropriate recognition method is determined and applied consistently, generally 
by analogy to the revenue from contracts with customers accounting standard. Amounts related to transactions with 
a counterparty in a collaborative arrangement that is not a customer are presented as collaboration revenue and on a 
separate line item from revenue recognized from contracts with customers, if any, in the Company’s consolidated 
statements of operations and comprehensive loss.

Under  certain  collaborative  arrangements,  the  Company  has  been  reimbursed  for  a  portion  of  its  research  and 
development  expenses  or  participates  in  the  cost-sharing  of  such  research  and  development  expenses.  Such 
reimbursements and cost-sharing arrangements are reflected as a reduction of research and development expense in 
the  Company’s  consolidated  statements  of  operations  and  comprehensive  loss,  as  the  Company  does  not  consider 
performing these activities for reimbursement to be a part of its ongoing major or central operations.

F-14

 
 
 
 
 
   
   
   
 
     
   
   
       
       
 
 
 
   
    
 
      
      
  
 
 
 
 
 
For  arrangements  or  transactions  between  arrangement  participants  determined  to  be  within  the  scope  of  the 
contracts with customers accounting standard, the Company evaluates the term of the arrangement and recognizes 
revenue when the customer obtains control of promised goods or services in a contract for an amount that reflects 
the  consideration  the  Company  expects  to  receive  in  exchange  for  those  goods  or  services.  For  contracts  with 
customers, the Company applies the following five-step model in order to determine this amount: (1) identification 
of the promised goods or services in the contract; (2) determination of whether the promised goods or services are 
performance obligations, including whether they are distinct in the context of the contract; (3) measurement of the 
transaction  price,  including  the  constraint  on  variable  consideration;  (4)  allocation  of  the  transaction  price  to  the 
performance  obligations;  and  (5)  recognition  of  revenue  when  (or  as)  the  Company  satisfies  each  performance 
obligation. 

The  Company  has  provided  standard  indemnification  and  protection  of  licensed  intellectual  property  for  its 
customer. These provisions are part of assurance that the licenses meet the agreements, representations and are not 
obligations to provide goods or services.

The  Company  only  applies  the  five-step  model  to  contracts  when  it  is  probable  the  Company  will  collect  the 
consideration  it  is  entitled  to  in  exchange  for  the  goods  or  services  it  transfers  to  the  customer.  As  part  of  the 
accounting for contracts with customers, the Company must develop assumptions that require judgment to determine 
the SSP of each performance obligation identified in the contract. The Company then allocates the total transaction 
price  to  each  performance  obligation  based  on  the  estimated  standalone  selling  price  (SSP)  of  each  performance 
obligation.  The  Company  recognizes  the  amount  of  the  transaction  price  that  is  allocated  to  the  respective 
performance obligation when the performance obligation is satisfied or as it is satisfied as revenue. 

Upfront License Fees

If  a  license  to  the  Company’s  intellectual  property  is  determined  to  be  distinct  from  the  other  performance 
obligations  identified  in  the  arrangement,  the  Company  recognizes  revenues  from  nonrefundable,  upfront  license 
fees  based  on  the  relative  value  prescribed  to  the  license  compared  to  the  total  value  of  the  arrangement.  The 
revenue  is  recognized  when  the  license  is  transferred  to  the  collaborator  and  the  collaborator  is  able  to  use  and 
benefit from the license.  For licenses that are not distinct from other obligations identified in the arrangement, the 
Company utilizes judgment to assess the nature of the combined performance obligation to determine whether the 
combined performance obligation is satisfied over time or at a point in time. If the combined performance obligation 
is  satisfied  over  time,  the  Company  applies  an  appropriate  method  of  measuring  progress  for  purposes  of 
recognizing  revenue  from  nonrefundable,  upfront  license  fees.  The  Company  evaluates  the  measure  of  progress 
each reporting period and, if necessary, adjusts the measure of performance and related revenue recognition.

Development and Regulatory Milestone Payments

Depending  on  facts  and  circumstances,  the  Company  may  record  revenues  from  certain  milestones  in  a  reporting 
period  before  the  milestone  is  achieved  if  the  Company  concludes  achievement  of  the  milestone  is  probable  and 
recognition  of  revenue  related  to  the  milestone  will  not  result  in  a  significant  reversal  in  amounts  recognized  in 
future  periods.  The  Company  records  a  corresponding  contract  asset  when  this  conclusion  is  reached.  Milestone 
payments  that  have  not  been  included  in  the  transaction  price  to  date  are  fully  constrained.  The  Company  re-
evaluates the probability of achievement of such milestones and any related constraint each reporting period. The 
Company adjusts its estimate of the overall transaction price, including the amount of collaborative revenue that was 
recorded, if necessary.  

Research and Development Service Payments

Under  the  Research,  Development,  Collaboration  and  License  Agreement  (Allergan  Agreement)  with  Allergan 
Pharmaceuticals  International  Limited  (Allergan),  the  Company  was  reimbursed  at  a  certain  percentage  for 
performing  research  and  development  services  based  on  hours  worked  by  the  Company’s  employees,  at  a  fixed 
contractual rate per hour, and third-party pass-through costs the Company incurred on a quarterly basis. Research 
and  development  service  payments  were  included  in  the  transaction  price  in  the  reporting  period  the  Company 
concluded it was probable that recording revenue in the period would not result in a significant reversal in amounts 
recognized  in  future  periods.  Accounts  receivable  were  recorded  when  the  right  to  the  research  and  development 
service payment consideration became unconditional. The Company recorded the full reimbursed portion of these 
expenses  as  collaboration  revenue  associated  with  the  Allergan  Agreement  in  its  consolidated  statements  of 
operations as the Company consider performing research and development services to be a part of its ongoing and 
central operations.

F-15

Sales-based Milestone and Royalty Payments

The  Company’s  customer  may  be  required  to  pay  the  Company  sales-based  milestone  payments  or  royalties  on 
future sales of commercial products. The Company recognizes revenues related to sales-based milestone and royalty 
payments upon the later to occur of (i) achievement of the collaborator’s underlying sales or (ii) satisfaction of any 
performance obligation(s) related to these sales, in each case assuming the Company’s licensed intellectual property 
is deemed to be the predominant item to which the sales-based milestones and/or royalties relate.

The Company receives payments from its customer based on billing schedules established in the contract.  Upfront 
payments  and  fees  are  recorded  as  deferred  revenue  upon  receipt  or  when  due  until  the  Company  performs  its 
obligations under the arrangement.  If the related performance obligation is expected to be satisfied within the next 
twelve  months,  these  amounts  will  be  classified  in  current  liabilities.  The  Company  recognizes  a  contract  asset 
relating to its conditional right to consideration that is not subject to a constraint. Amounts are recorded as accounts 
receivable when the Company’s right to consideration is unconditional.  

A  net  contract  asset  or  liability  is  presented  for  each  contract  with  a  customer.  The  Company  does  not  assess 
whether  a  contract  has  a  significant  financing  component  if  the  expectation  at  contract  inception  is  such  that  the 
period between payment by the customer and the transfer of the promised goods or services to the customer will be 
one year or less.

At December 31, 2021 and 2020, all accounts receivable from collaborations are deemed collectible. 

Contract Liabilities

The following tables present changes in the Company’s contract liabilities (in thousands):

Balance at
Beginning
of Period     Additions     Deductions    

Balance at
End of
Period

Year Ended December 31, 2021
Contract liabilities:

Deferred revenue....................................................  $

8,987    $

—    $

(6,254)   $

2,733 

Year Ended December 31, 2020
Contract liabilities:

Deferred revenue....................................................  $

37,048    $

40,000    $

(68,061)   $

8,987  

Year Ended December 31,
2020
2021

Collaboration revenue recognized in the period from
Amounts included in deferred revenue at the beginning of the period.......  $
Performance obligations satisfied in previous period.................................   

6,254    $
—     

37,048   
—   

Stock-Based Compensation

The Company measures stock-based compensation to employees, consultants, Board members, and non-employees 
at fair value on the grant date of the award. The fair value of RSUs is determined based on the number of shares 
granted and the quoted market price of the Company’s common stock on the date of grant. Compensation cost is 
recognized  as  expense  on  a  straight-line  basis  over  the  requisite  service  period  of  the  award.  Stock-based  awards 
with graded vesting schedules are recognized using the accelerated attribution method on a straight-line basis over 
the  requisite  service  period  for  each  separately  vesting  portion  of  the  award.  For  awards  that  have  a  performance 
condition,  compensation  cost  is  measured  based  on  the  fair  value  of  the  award  on  the  grant  date,  the  date 
performance  targets  are  established,  and  is  expensed  over  the  requisite  service  period  for  each  separately  vesting 
tranche when achievement of the performance condition becomes probable. The Company assesses the probability 
of the performance conditions being met on a continuous basis. Forfeitures are recognized when they occur.

F-16

 
 
 
     
       
       
   
   
 
     
       
       
   
   
 
 
     
       
       
   
   
 
     
       
       
   
   
 
     
       
       
   
   
 
 
 
   
 
 
   
   
     
       
   
The  Company  estimates  the  fair  value  of  stock  option  grants  that  do  not  contain  market-based  vesting  conditions 
using the Black-Scholes option pricing model. The assumptions used in estimating the fair value of these awards, 
such  as  expected  term,  expected  dividend  yield,  volatility  and  risk-free  interest  rate,  represent  management’s  best 
estimates and involve inherent uncertainties and the application of management’s judgment. The Company is also 
required to make estimates as to the probability of achieving the specific performance conditions. If actual results 
are  not  consistent  with  the  Company’s  assumptions  and  judgments  used  in  making  these  estimates,  the  Company 
may  be  required  to  increase  or  decrease  compensation  expense,  which  could  be  material  to  the  Company’s 
consolidated results of operations.

Research and Development Expense and Accruals

Research and development costs include personnel-related costs, outside contracted services including clinical study 
costs, facilities costs, fees paid to consultants, milestone payments prior to FDA approval, license fees prior to FDA 
approval, professional services, travel costs, dues and subscriptions, depreciation and materials used in clinical trials 
and  research  and  development  and  costs  incurred  under  the  Company’s  collaboration  agreements.  Research  and 
development  costs  are  expensed  as  incurred  unless  there  is  an  alternative  future  use  in  other  research  and 
development  projects.  Payments  made  prior  to  the  receipt  of  goods  or  services  to  be  used  in  research  and 
development  are  capitalized  until  the  goods  or  services  are  received.  Such  payments  are  evaluated  for  current  or 
long-term  classification  based  on  when  they  will  be  realized  or  consumed.  Assets  acquired  as  part  of  an  asset 
acquisition  that  are  used  in  research  and  development  or  are  IPR&D  are  immediately  expensed  as  research  and 
development unless there is an alternative future use in other research and development projects.

The  Company  records  expenses  related  to  clinical  studies  and  manufacturing  development  activities  based  on  its 
estimates  of  the  services  received  and  efforts  expended  pursuant  to  contracts  with  multiple  contract  research 
organizations  (CROs)  and  manufacturing  vendors  that  conduct  and  manage  these  activities  on  its  behalf.  The 
financial  terms  of  these  agreements  are  subject  to  negotiation,  vary  from  contract  to  contract,  and  may  result  in 
uneven payment flows. There may be instances in which payments made to the Company’s vendors will exceed the 
level  of  services  provided  and  result  in  a  prepayment  of  the  expense.  Payments  under  some  of  these  contracts 
depend on factors such as the successful enrollment of subjects and the completion of clinical study milestones. In 
amortizing or accruing service fees, the Company estimates the time period over which services will be performed, 
enrollment of subjects, number of sites activated and the level of effort to be expended in each period. If the actual 
timing of the performance of services or the level of effort varies from the Company’s estimate, the Company will 
adjust the accrued or prepaid expense balance accordingly. To date, there have been no material differences from the 
Company’s estimates to the amounts actually incurred.

The  Company  has  entered  and  may  continue  to  enter  into  license  agreements  to  access  and  utilize  certain 
technology. In each case, the Company evaluates if the license agreement results in the acquisition of an asset or a 
business. To date, none of the Company’s license agreements have been considered to be acquisitions of businesses. 
For asset acquisitions, the upfront payments to acquire such licenses, as well as any future milestone payments, are 
immediately recognized as research and development expense when paid, provided there is no alternative future use 
of  the  rights  in  other  research  and  development  projects.  These  license  agreements  may  also  include  contingent 
consideration in the form of cash payments to be made for future milestone events. The Company assesses whether 
such contingent consideration meets the definition of a derivative and to date the Company has determined that such 
contingent consideration are not derivatives.

Restructuring Charges 

The  Company  recognizes  restructuring  charges  related  to  reorganization  plans  that  have  been  committed  to  by 
management  and  when  liabilities  have  been  incurred.  In  connection  with  these  activities,  the  Company  records 
restructuring charges at fair value for (1) contractual employee termination benefits when obligations are associated 
to  services  already  rendered,  rights  to  such  benefits  have  vested,  and  payment  of  benefits  is  probable  and  can  be 
reasonably  estimated,  (2)  one-time  employee  termination  benefits  when  management  has  committed  to  a  plan  of 
termination,  the  plan  identifies  the  employees  and  their  expected  termination  dates,  the  details  of  termination 
benefits  are  complete,  it  is  unlikely  changes  to  the  plan  will  be  made  or  the  plan  will  be  withdrawn  and 
communication  to  such  employees  has  occurred,  and  (3)  contract  termination  costs  when  a  contract  is  terminated 
before the end of its term. 

F-17

One-time  employee  termination  benefits  are  recognized  in  their  entirety  when  communication  has  occurred, and 
future  services  are  not  required.  If  future  services  are  required,  the  costs  are  recorded  ratably  over  the  remaining 
period  of  service.  Contract  termination  costs  to  be  incurred  over  the  remaining  contract  term  without  economic 
benefit are recorded in their entirety when the contract is canceled.

The recognition of restructuring charges requires the Company to make certain judgments and estimates regarding 
the nature, timing and amount of costs associated with the planned reorganization plan. To the extent the Company’s 
actual  results  differ  from  its  estimates  and  assumptions,  the  Company  may  be  required  to  revise  the  estimates  of 
future accrued restructuring liabilities, requiring the recognition of additional restructuring charges or the reduction 
of  accrued  restructuring  liabilities  already  recognized.  Such  changes  to  previously  estimated  amounts  may  be 
material to the consolidated financial statements. Changes in the estimates of the restructuring charges are recorded 
in the period the change is determined. 

At the end of each reporting period, the Company evaluates the remaining accrued restructuring balances to ensure 
that no excess accruals are retained, and the utilization of the provisions are for their intended purpose in accordance 
with developed restructuring plans.

For  gains  and  losses  on  the  derecognition  of  nonfinancial  assets  the  Company  determines  if  a  contract  exists, 
identifies  the  distinct  non-financial  assets,  and  determines  when  control  transfers  and,  therefore,  when  to 
derecognize  the  asset.  Additionally,  the  Company  applies  the  measurement  principles  of  revenue  from  contracts 
with customers within U.S. GAAP to determine the amount of consideration to include in the calculation of the gain 
or  loss  for  the  non-financial  asset.  Any  gains  or  losses  have  been  included  within  research  and  development 
expenses.

Variable Interest Entities

The Company reviews agreements it enters into with third party entities, pursuant to which we may have a variable 
interest in the entity, in order to determine if the entity is a variable interest entity (VIE). If the entity is a VIE, the 
Company assesses whether or not it is the primary beneficiary of that entity. In determining whether the Company is 
the primary beneficiary of an entity, the Company applies a qualitative approach that determines whether it has both 
(1) the power to direct the economically significant activities of the entity and (2) the obligation to absorb losses of, 
or the right receive benefits from, the entity that could potentially be significant to that entity. If the Company were 
to determine it is the primary beneficiary of a VIE, the Company would consolidate the statements of operations and 
financial condition of the VIE into its consolidated financial statements.

The Company’s determination about whether it should consolidate such VIEs is made continuously as changes to 
existing  relationships  or  future  transactions  may  result  in  a  consolidation  event.  As  of  December  31,  2021,  the 
Company did not consolidate any entities it had determined to be VIEs.

Income Taxes

The Company records income taxes using the asset and liability method. Deferred income tax assets and liabilities 
are  recognized  for  the  future  tax  effects  attributable  to  temporary  differences  between  the  financial  statement 
carrying amounts of existing assets and liabilities and their respective income tax bases, and operating loss and tax 
credit carryforwards. The effect of a change in tax rates on deferred tax assets and liabilities is recognized in income 
in the period that includes the enactment date. The Company establishes a valuation allowance if it is more likely 
than not that the deferred tax assets will not be realized based on an evaluation of objective verifiable evidence. For 
tax positions that are more likely than not of being sustained upon audit, the Company recognizes the largest amount 
of the benefit that is greater than 50% likely of being realized. For tax positions that are not more likely than not of 
being sustained upon audit, the Company does not recognize any portion of the benefit.

The Company recognizes and measures uncertain tax positions using a two-step approach set forth in authoritative 
guidance.  The  first  step  is  to  evaluate  the  tax  position  taken  or  expected  to  be  taken  by  determining  whether  the 
weight  of  available  evidence  indicates  that  it  is  more  likely  than  not  that  the  tax  position  will  be  sustained  in  an 
audit,  including  resolution  of  any  related  appeals  or  litigation  processes.  The  second  step  is  to  measure  the  tax 
benefit  as  the  largest  amount  that  is  more  than  50%  likely  to  be  realized  upon  ultimate  settlement.  Significant 
judgment is required to evaluate uncertain tax positions. The Company evaluates uncertain tax positions on a regular 
basis. The evaluations are based on a number of factors, including changes in facts and circumstances, changes in 
tax law, correspondence with tax authorities during the course of the audit, and effective settlement of audit issues. 

F-18

The provision for income taxes includes the effects of any accruals which the Company believes are appropriate. It 
is the Company’s policy to recognize interest and penalties related to income tax matters in income tax expense. No 
interest or penalties related to uncertain tax positions has been incurred or accrued for any periods presented.  

In  March  2020,  the  Families  First  Coronavirus  Response  Act  (FFCR  Act)  and  the  Coronavirus  Aid,  Relief,  and 
Economic Security Act (CARES Act) were each enacted in response to the COVID-19 pandemic. The FFCR Act 
and the CARES Act contain numerous income tax provisions relating to refundable payroll tax credits, deferment of 
employer  side  social  security  payments,  net  operating  loss  carryback  periods,  alternative  minimum  tax  credit 
refunds, modifications to the net interest deduction limitations and technical corrections to tax depreciation methods 
for qualified improvement property. 

In  June  2020,  Assembly  Bill  85  (A.B.  85)  was  signed  into  California  law.  A.B.  85  provides  for  a  three-year 
suspension of the use of net operating losses for medium and large businesses and a three-year cap on the use of 
business incentive tax credits to offset no more than $5.0 million of tax per year. A.B. 85 suspends the use of net 
operating losses for taxable years 2020, 2021 and 2022 for certain taxpayers with taxable income of $1.0 million or 
more. The carryover period for any net operating losses that are suspended under this provision will be extended. 
A.B. 85 also requires that business incentive tax credits including carryovers may not reduce the applicable tax by 
more  than  $5.0  million  for  taxable  years  2020,  2021  and  2022.  On  February  9,  2022,  Senate  Bill  No.  113  was 
enacted that removed the limitations on the use of NOLs and the cap on the business incentive tax credits that were 
suspended in accordance with AB 85 effective for tax year 2022.

In  December  2020,  the  Consolidated  Appropriations  Act,  2021  (CAA)  was  signed  into  law.  The  CAA  included 
additional funding through tax credits as part of its economic package for 2021. 

In March 2021, the American Rescue Plan (H.R. 1319) was signed into law. This legislation extends and enhances a 
number  of  current-law  tax  incentives  for  businesses,  but  also  expands  the  definition  of  a  “covered  employee”  as 
defined by Section 162(m)(1) of the Internal Revenue Code. 

The  FFCR  Act,  CARES  Act,  A.B.  85,  CAA  and  H.R.  1319  did  not  have  a  material  impact  on  the  Company’s 
consolidated financial statements.

Net Loss per Share

Basic net loss per common share excludes dilution and is computed by dividing net loss by the weighted average 
number of common shares outstanding during the period.  Diluted net loss per common share reflects the potential 
dilution  that  could  occur  if  securities  or  other  contracts  to  issue  common  stock  were  exercised  or  converted  into 
common  stock  or  resulted  in  the  issuance  of  common  stock  that  then  shared  in  the  earnings  of  the  entity  unless 
inclusion of such shares would be anti-dilutive.  Since the Company has only incurred losses, basic and diluted net 
loss per share is the same.

The  Company  had  pre-funded  warrants  to  purchase  up  to  2,424,242  shares  of  common  stock  outstanding  as  of 
December 31, 2020. All 2,424,242 of the pre-funded warrants were exercised through a cashless exercise (see Note 
8) in 2021. Prior to these exercises, the pre-funded warrants were exercisable for shares of common stock at a price 
of  $0.001  per  share.  The  shares  of  common  stock  into  which  the  then  outstanding  pre-funded  warrants  could  be 
exercised  were  considered  outstanding  for  the  purposes  of  computing  earnings  per  share  because  the  shares  were 
issuable for little or no consideration, they were fully vested, and were exercisable after the original issuance date.

F-19

A  reconciliation  of  the  numerators  and  the  denominators  of  the  basic  and  diluted  net  loss  per  common  share 
computations is as follows (in thousands, except per share amounts):

Year Ended December 31,

2021

2020

Numerator:

Net loss .................................................................................................. $

(129,855)   $

(62,152)

Denominator:

Weighted average common shares and
    pre-funded warrants outstanding - basic and diluted ........................
Net loss per share - basic and diluted..........................................................  $

43,280,383   

(3.00)   $

35,427,120 
(1.75)

Securities excluded from the computation of diluted loss from per share because including them would have been 
antidilutive are as follows:

Options to purchase common stock ............................................................   
Common stock subject to purchase under our ESPP ..................................   
Unvested RSUs ...........................................................................................   
Total ............................................................................................................   

Comprehensive Loss

Year Ended December 31,

2021
6,161,901   
78,740   
970,339   
7,210,980   

2020
6,696,592 
44,223 
746,868 
7,487,683  

Comprehensive  loss  is  comprised  of  net  loss  and  adjustments  for  the  change  in  unrealized  gains  and  losses  on 
investments  in  available-for-sale  marketable  securities.  The  Company  displays  comprehensive  loss  and  its 
components in the consolidated statements of operations and comprehensive loss, net of tax effects if any.

Concentrations of Risk

Credit Risk

Financial  instruments  which  potentially  subject  the  Company  to  credit  risk  consist  primarily  of  cash,  cash 
equivalents and marketable securities. The Company holds these investments in highly rated financial institutions, 
and, by policy, limits the amounts of credit exposure to any one financial institution. These amounts at times may 
exceed federally insured limits. The Company has not experienced any credit losses in such accounts and does not 
believe  it  is  exposed  to  any  significant  credit  risk  on  these  funds.  The  Company  has  no  off-balance  sheet 
concentrations  of  credit  risk,  such  as  foreign  currency  exchange  contracts,  option  contracts  or  other  hedging 
arrangements.

F-20

 
 
 
 
 
   
 
   
    
 
  
   
    
 
  
 
 
 
 
 
 
 
   
 
 
 
 
 
Supplier Risk

Certain materials and key components the Company utilizes in its operations are obtained through single suppliers. 
Since the suppliers of key components and materials must be named in a New Drug Application (NDA) filed with 
the FDA for a product, significant delays can occur if the qualification of a new supplier is required. If delivery of 
material from the Company’s suppliers were interrupted for any reason, the Company may be unable to supply any 
of its product candidates for clinical trials. 

Adoption of Recent Accounting Pronouncements

On  January  1,  2021,  the  Company  adopted  Accounting  Standards  Update  (ASU)  2020-10,  Codification 
Improvements – Disclosures (ASU 2020-10). ASU 2020-10 improves consistency by amending the codification to 
include all disclosure guidance in the appropriate disclosure sections and clarifies application of various provisions 
in  the  codification  by  amending  and  adding  new  headings,  cross  referencing  to  other  accounting  standards  and 
refining  or  correcting  termination.  The  adoption  of  this  standard  had  no  material  impact  on  the  Company’s 
consolidated financial statements and related disclosures.

Accounting Pronouncements to Be Adopted

In June 2016, the Financial Accounting Standards Board (the FASB) issued ASU 2016-13, Financial Instruments – 
Credit  Losses:  Measurement  of  Credit  Losses  on  Financial  Instruments  (ASU  2016-13),  which  requires  that 
expected  credit  losses  relating  to  financial  assets  measured  on  an  amortized  cost  basis  and  available-for-sale  debt 
securities be recorded through an allowance for credit losses. ASU 2016-13 limits the amount of credit losses to be 
recognized  for  available-for-sale  debt  securities  to  the  amount  by  which  carrying  value  exceeds  fair  value  and 
requires  the  reversal  of  previously  recognized  credit  losses  if  fair  value  increases.  In  April,  May  and  November 
2019,  the  FASB  issued  additional  amendments  to  the  new  guidance  related  to  transition  and  clarification.  In 
November 2019, the FASB issued ASU 2019-10, Financial Instruments – Credit Losses (Topic 326), Derivatives 
and Hedging (Topic 815), and Leases (Topic 842): Effective Dates, which deferred the effective date of this standard 
for  all  entities  except  SEC  filers  that  are  not  smaller  reporting  companies  to  fiscal  years  beginning  after 
December 15, 2022, including interim periods within those fiscal years. Early adoption is permitted. The Company 
is currently evaluating the timing and impact of adopting ASU 2016-13 on its consolidated financial statements and 
related disclosures.

In August 2020, the FASB issued ASU 2020-06, Debt—Debt with Conversion and Other Options (Subtopic 470-20) 
and  Derivatives  and  Hedging—Contracts  in  Entity’s  Own  Equity  (Subtopic  815-40):  Accounting  for  Convertible 
Instruments and Contracts in an Entity’s Own Equity (ASU 2020-06), which simplifies the accounting for certain 
financial instruments with characteristics of liabilities and equity, including convertible instruments and contracts on 
an entity’s own equity. Specifically, ASU 2020-06 simplifies accounting for convertible instruments by removing 
major separation models in ASC 470-20 that require separate accounting for embedded conversion features. ASU 
2020-06 also removes certain settlement conditions in ASC 815-40 that are required for equity contracts to qualify 
for the derivative scope exception, which will permit more equity contracts to qualify for the scope exception and 
simplifies  the  diluted  earnings  per  share  calculation  in  certain  areas.  ASU  2020-06  is  effective  for  interim  and 
annual periods beginning after December 15, 2021, with early adoption permitted. Adoption of ASU 2020-06 can 
either be on a modified retrospective or full retrospective basis. The Company does not expect ASU 2020-06 to have 
a material impact on its consolidated financial statements and related disclosures.

In  May  2021,  the  FASB  issued  ASU  2021-04,  Issuer's  Accounting  for  Certain  Modifications  or  Exchanges  of 
Freestanding  Equity-Classified  Written  Call  Options  (ASU  2021-04),  which  requires  issuers  to  account  for  a 
modification or exchange of freestanding equity-classified written call options that remain equity classified after the 
modification  or  exchange  based  on  the  economic  substance  of  the  modification  or  exchange.  Specifically,  under 
ASU  2021-04,  an  issuer  determines  the  accounting  for  the  modification  or  exchange  based  on  whether  the 
transaction was done to issue equity, issue and or modify debt, or for other reasons. The result is a change in the fair 
value of the written call option dependent on the reason for the modification. ASU 2021-04 is effective for interim 
and annual periods beginning after December 15, 2021, with early adoption permitted. Adoption of ASU 2021-04 is 
applied  on  a  prospective  basis.  The  Company  does  not  expect  ASU  2021-04  to  have  a  material  impact  on  its 
consolidated financial statements and related disclosures.

F-21

Note 3 - Investments in Marketable Securities

Investments in marketable available-for-sale securities consisted of the following (in thousands):

Amortized
Cost

December 31, 2021

Gross
Unrealized
Gain

Gross
Unrealized
Loss

Fair Value

Cash equivalents

Money market funds ...............................................   $
Total cash equivalents ..................................................    
Short-term marketable securities

U.S. and foreign corporate debt securities..............    
Asset-backed securities...........................................    
U.S. and foreign commercial paper ........................    
Total short-term marketable securities .........................    
Long-term marketable securities

U.S. and foreign corporate debt securities..............    
U.S. treasury securities ...........................................    
Total long-term marketable securities..........................    
Total cash equivalents and marketable securities ........   $

42,507    $
42,507     

7,015     
29,097     
64,929     
101,041     

19,117     
8,960     
28,077     
171,625    $

—    $
—     

—     
—     
—     
—     

—     
—     
—     
—    $

—    $
—     

42,507 
42,507 

(2)    
(38)    
(1)    
(41)    

(74)    
(31)    
(105)    
(146)   $

7,013 
29,059 
64,928 
101,000 

19,043 
8,929 
27,972 
171,479  

Amortized
Cost

December 31, 2020

Gross
Unrealized
Gain

Gross
Unrealized
Loss

Fair Value

Cash equivalents

Money market funds ...............................................   $
U.S. and foreign commercial paper ........................    
Total cash equivalents ..................................................    
Short-term marketable securities

U.S. and foreign corporate debt securities..............    
Asset-backed securities...........................................    
U.S. treasury securities ...........................................    
U.S. and foreign commercial paper ........................    
Total short-term marketable securities .........................    
Total cash equivalents and marketable securities ........   $

47,553    $
6,498     
54,051     

16,939     
12,674     
23,997     
103,356     
156,966     
211,017    $

—    $
—     
—     

3     
2     
2     
—     
7     
7    $

—    $
—     
—     

(3)    
(1)    
—     
—     
(4)    
(4)   $

47,553 
6,498 
54,051 

16,939 
12,675 
23,999 
103,356 
156,969 
211,020  

Short-term  marketable  securities  held  as  of  December  31,  2021  had  contractual  maturities  of  less  than  one  year. 
Long-term marketable securities held as of December 31, 2021 had contractual maturities of at least one year but
less than two years.

Realized  gains  and  losses  for  the  years  ended  December  31,  2021  and  2020  were  not  significant.  None  of  the 
Company’s investments have been in a continuous unrealized loss position for more than 12 months as of December 
31, 2021.

See Note 2 for further information regarding the fair value of our investments in marketable securities.

F-22

 
 
 
 
 
   
   
   
 
     
       
       
       
 
   
      
      
      
  
   
      
      
      
  
 
 
 
 
 
   
   
   
 
     
       
       
       
 
   
      
      
      
  
Note 4 - Property and Equipment, Net

Property and equipment, net consists of the following (in thousands):

December 31,

2021

2020

Lab equipment ........................................................................................   
Office equipment ....................................................................................   
Leasehold improvement..........................................................................   
Total property and equipment ......................................................................   
Less: Accumulated depreciation ..................................................................   
Property and equipment, net.........................................................................  $

18     
699     
1,629     
2,346     
(1,207)    
1,139    $

247 
699 
2,490 
3,436 
(1,836)
1,600  

Depreciation  expense  for  the  years  ended  December  31,  2021  and  2020  was  $0.5  million,  and  $0.7  million, 
respectively, and was recorded in both research and development expense and general and administrative expense in 
the  consolidated  statements  of  operations  and  comprehensive  loss.  Primarily  all  of  the  Company’s  property  and 
equipment is located in the U.S.

Note 5 - Goodwill and Indefinite-Lived Intangible Asset Impairment

Goodwill

The Company elected to perform a quantitative impairment assessment of goodwill for its single reporting unit in 
the fourth quarter of 2021 due to a sustained decline in its market capitalization, an increase in negative economic 
outlook  for  biotech  markets  and  a  fourth  quarter  unfavorable  clinical  trial  result  for  a  competitor’s  curative 
combination therapy for HBV infection. The Company estimated and reconciled the fair value of its reporting unit 
using  both  a  market  approach,  utilizing  the  Company’s  market  capitalization  adjusted  for  an  estimated  control 
premium, and the income approach, discounting future cash flows based on management’s expectations of timelines 
to  complete  clinical  trials,  regulatory  and  commercial  probabilities  of  technical  success  as  well  as  future  earnings 
forecast. Based on this analysis, and after completing an impairment assessment of its indefinite-lived and long-lived 
assets,  the  Company  concluded  the  fair  value  of  its  single  reporting  unit  was  less  than  its  carrying  value  and 
therefore recognized a goodwill impairment charge of $12.6 million. This was primarily driven by increased risks 
impacting  the  Company  that,  from  the  standpoint  of  a  market  participant,  were  captured  through  an  increase  in 
estimated  discount  rates.  The  calculation  of  the  impairment  charge  includes  substantial  fact-based  determinations 
and  estimates  including  discount  rates,  future  revenue,  profitability,  cash  flows,  probabilities  of  technical  success 
and  fair  values  of  assets  and  liabilities,  and  any  changes  to  these  assumptions  could  result  in  changes  to  the  fair 
value  of  our  single  reporting  unit.  The  goodwill  impairment  charge  is  reflected  in  impairment  of  goodwill  and 
indefinite-lived intangible asset in the consolidated statements of operations and comprehensive loss.  

No goodwill impairment charges were recorded in 2020. 

Indefinite-Lived Intangible Asset

During  the  fourth  quarter  of  2021  and  prior  to  the  goodwill  impairment  test,  the  Company  also  completed  a 
quantitative  impairment  test  for  its  IPR&D  asset  associated  with  the  Assembly  Pharmaceuticals,  Inc.  acquisition. 
The Company utilized the discounted cash flow model of the income approach and determined the carrying value of 
its IPR&D asset was fully impaired resulting in an impairment charge of $29.0 million. This was primarily driven by 
a higher discount rate applied to future cash flows based on a market participant’s view of increased risk associated 
with  a  negative  economic  outlook  for  biotech  markets  and  a  fourth  quarter  unfavorable  clinical  trial  result  for  a 
competitor’s  curative  combination  therapy  for  HBV  infection.  More  significant  assumptions  inherent  in  the 
development  of  the  model  included  the  estimated  annual  cash  flows,  particularly  net  revenues,  the  appropriate 
discount rate to select in order to measure the risk inherent in the future cash flows, cost to complete the IPR&D 
project  as  well  as  other  factors.  The  impairment  charge  recorded  is  reflected  in  impairment  of  goodwill  and 
indefinite-lived intangible asset in the consolidated statements of operations and comprehensive loss.

No indefinite-lived intangible asset impairment charges were recorded in 2020.

F-23

 
 
 
 
 
   
 
Note 6 – Other Accrued Expenses 

Other accrued expenses consist of the following (in thousands): 

Accrued expenses:

Accrued compensation............................................................................  $
Accrued restructuring charges ................................................................   
Accrued professional fees and other.......................................................   
Total accrued expenses.................................................................................  $

6,426    $
—     
437     
6,863    $

7,016 
4,164 
807 
11,987  

December 31,

2021

2020

Note 7 – Restructurings

Restructuring  charges  relate  to  the  Company’s  decision  to  relocate  its  headquarters  to  South  San  Francisco, 
California,  which  was  approved  by  the  Board  of  Directors  effective  January  2020  and  the  December  2020  wind-
down of the Company’s Microbiome program.

The following table summarizes the Company’s costs incurred (in thousands):

Total
Restructuring
Cost

Employee
Severance
and Related
Benefits

Asset
Impairment
and Other
Costs

Cumulative restructuring costs incurred through 
December 31, 2021 ..................................................................  $
Restructuring costs incurred for the year ended December 
31, 2021....................................................................................  $
Restructuring costs incurred for the year ended December 
31, 2020....................................................................................  $

6,430    $

3,240    $

3,190   

(1,348)   $

(2,959) (1) $

1,611   

5,684    $

4,105    $

1,579   

(1) The  reversal  of $3.0  million  in  employee  severance  and  related  benefits  recognized  during  the  year  ended 
December 31, 2021 reflects the reversal of previously recognized stock-based compensation expense related to 
forfeited  awards  based  on  the  Company’s  policy  of  recognizing  stock-based  awards  with  graded  vesting 
schedules using an accelerated attribution method on a straight-line basis over the requisite service period for 
each separately vesting portion of the award and to recognize forfeitures when they occur.

The cumulative restructuring costs incurred through December 31, 2021 represents all costs to be incurred.

The following table presents where the restructuring charges were recognized (in thousands):

Research and development...........................................................................  $
General and administrative...........................................................................   
Total .............................................................................................................  $

(1,625)   $
277    $
(1,348)   $

5,486 
198 
5,684  

Year Ended December 31,
2020
2021

F-24

 
 
 
 
 
   
 
   
      
  
 
 
   
   
   
 
 
 
 
 
   
 
The following table presents the activity in the accrued restructuring charges during the period (in thousands):

Total
Restructuring
Cost

Employee
Severance
and Related
Benefits

Asset
Impairment
and Other
Costs

Accrued balance as of December 31, 2019 ..............................  $
Costs incurred .....................................................................   
Reductions for cash payments ............................................   
Accrued balance as of December 31, 2020 ..............................  $
Costs incurred .....................................................................   
Reductions for cash payments ............................................   
Accrued balance as of December 31, 2021 ..............................  $

2,094    $
3,843     
(1,773)   
4,164    $
1,611     
(5,775)   
—    $

2,094    $
3,843     
(1,773)   
4,164    $
—     
(4,164)   
—    $

—   
—   
—   
—   
1,611   
(1,611) (1)
—   

(1) Cash payments are presented net of proceeds received from the sale of assets of $0.9 million.

The  asset  impairment  and  other  costs  includes  $1.4  million  for  the  remaining  payment  obligations  of  leased 
equipment the Company purchased and sold to third parties.

Microbiome Purchase Agreement 

In December 2021, the Company entered into an asset purchase agreement (the Microbiome Purchase Agreement) 
with a third party pursuant to which the Company sold know-how, patents, materials and regulatory filings for the 
Company’s  Microbiome  program.  The  sale  included  ABI-M201  (M201),  which  had  been  the  Company’s  lead 
candidate  in  its  Microbiome  program.  As  consideration  for  the  sale,  the  Company  was  entitled  to  receive  $3.0 
million,  of  which  $1.5  million  was  received  in  December  2021  and  the  remaining  $1.5  million  was  received  in 
February 2022. The Company is also entitled to receive a $10.0 million milestone payment upon the achievement of 
a regulatory approval milestone as defined in the purchase agreement.

The Microbiome Purchase Agreement is within the scope of gains and losses from the derecognition of nonfinancial 
assets guidance since the Company had previously wound-down the Microbiome program, M201 was no longer a 
part  of  the  Company’s  ongoing  major  or  central  operations.  The  Company  determined  all  assets  sold  under  the 
Microbiome  Purchase  Agreement  represent  one  distinct  nonfinancial  asset  as  individually,  they  do  not  have 
standalone  value.  The  transaction  price  at  the  inception  of  the  agreement  was  limited  to  the  $3.0  million  upfront 
payments. The variable consideration relating to the $10.0 million milestone has not been included in the transaction 
price as it was fully constrained as of December 31, 2021. As part of the Company’s evaluation of the development 
milestone  constraint,  it  determined  the  achievement  of  the  milestone  is  contingent  upon  success  in  future  clinical 
studies and regulatory approvals which are not within its control and uncertain at this stage. The assets sold had no 
carrying  value  and  the  full  $3.0  million  transaction  price  resulted  in  the  recognition  of  a  gain.  The  Company 
determined  the  transfer  of  control  of  the  assets  sold  was  completed  in  December  2021.  The  $3.0  million  gain  is 
included  as  a  reduction  of  research  and  development  expenses  in  the  Company’s  consolidated  statements  of 
operations and comprehensive loss. The $1.5 million due as of December 31, 2021 is included in prepaid expenses 
and other current assets on the Company’s consolidated balance sheet.

Note 8 - Stockholders’ Equity

The Company is authorized to issue 5,000,000 shares of preferred stock as of December 31, 2021 and 2020. As of 
December 31, 2021 and 2020, no shares of preferred stock were issued and outstanding. The Company is authorized 
to issue 100,000,000 shares of common stock as of December 31, 2021 and 2020.

Sale of Common Stock

In August 2020, the Company filed a shelf registration statement on Form S-3 with the SEC, File No. 333-248469, 
that became effective on September 4, 2020 (the 2020 Registration Statement). The Company may from time to time 
sell any combination of the securities described in the 2020 Registration Statement in one or more offerings up to an 

F-25

 
 
   
   
   
aggregate  offering  price  of  $300.0  million.  In  connection  with  the  filing  of  the  2020  Registration  Statement,  the 
Company entered into a sales agreement under which the Company may offer and sell shares of its common stock 
having an aggregate offering price of up to $100.0 million through “at-the-market” offerings (2020 ATM), which 
shares are included in the $300.0 million of securities registered pursuant to the 2020 Registration Statement. During 
the year ended December 31, 2020, the Company issued and sold 892,840 shares of common stock under the 2020 
ATM,  for  which  the  Company  received  net  proceeds  of  $5.5  million,  after  deducting  commissions,  fees  and 
expenses. During the year ended December 31, 2021, the Company issued and sold 11,234,207 shares of common 
stock  under  the  2020  ATM,  for  which  the  Company  received  net  proceeds  of  $52.8  million,  after  deducting 
commissions, fees and expenses. 

Common Stock Warrants

In December 2019, the Company sold to various investors an aggregate of 6,287,878 shares of common stock at a 
public offering price of $16.50 per share, which included the exercise in full by the underwriters of their option to 
purchase  1,136,363  shares  of  common  stock,  and  pre-funded  warrants  to  purchase  2,424,242  shares  of  common 
stock at a public offering price of $16.499. The Company received aggregate net proceeds of $134.7 million from 
the offering and the option exercise, after deducting underwriting discounts and commissions and offering expenses 
payable  by  the  Company.  The  pre-funded  warrants  became  immediately  exercisable  upon  issuance  at  an  exercise 
price  of  $0.001  per  share,  but  under  their  terms,  the  outstanding  pre-funded  warrants  to  purchase  shares  of  the 
Company’s  common  stock  generally  may  not  be  exercised  if  the  holder’s  ownership  of  the  Company’s  common 
stock  would  exceed  19.99%  following  such  exercise.  The  exercise  price  and  number  of  shares  of  common  stock 
issuable upon the exercise of the pre-funded warrants (Warrant Shares) are subject to adjustment in the event of any 
stock dividends and splits, reverse stock split, recapitalization, reorganization or similar transaction, as described in 
the pre-funded warrant agreements. Under certain circumstances, the pre-funded warrants may be exercisable on a 
“cashless” basis. Both the pre-funded warrants and the Warrant Shares are registered securities. 

The pre-funded warrants were classified as a component of permanent stockholders’ equity within additional paid-
in-capital and were recorded at the issuance date using a relative fair value allocation method. The Company valued 
the  pre-funded  warrants  at  issuance,  concluding  their  sales  price  approximated  their  fair  value,  and  allocated  net 
proceeds  from  the  sale  proportionately  to  the  common  stock  and  pre-funded  warrants  of  which  $37.5  million 
allocated to the pre-funded warrants and recorded as a component of additional paid-in-capital.

The following warrants to purchase shares of the Company’s common stock were issued and outstanding:

Issue date
December 16, 2019  

Expiration
date
None

Exercise Price
per Share

As of December 31, 
2021

As of December 31, 
2020

  $

0.001   

—   

2,424,242  

During the year ended December 31, 2021, there were 2,424,242 pre-funded warrants exercised through a cashless 
exercise, resulting in the issuance of 2,423,634 shares of the Company’s common stock. There were no pre-funded 
warrants exercised during the year ended December 31, 2020. During the year ended December 31, 2020, 15,296 
warrants to purchase common stock expired unexercised.

Note 9 - Stock-Based Compensation

Equity Incentive Plans

In June 2020, the Company’s stockholders approved an amendment to the Assembly Biosciences, Inc. 2018 Stock 
Incentive Plan (the 2018 Plan) that increased the aggregate number of shares of common stock reserved under the 
2018 Plan to 4,600,000.

In May 2021, the Company’s stockholders approved an amendment to the 2018 Plan that increased the aggregate 
number of shares of common stock reserved under the 2018 Plan to 6,600,000 and the Assembly Biosciences, Inc. 
Employee  Stock  Purchase  Plan  (the  2018  ESPP)  that,  among  other  things,  increased  the  number  of  shares  of 
common stock reserved to an aggregate of 1,300,000.

As of December 31, 2021, the Company had awards outstanding under the following shareholder approved plans: 
2010  Equity  Incentive  Plan  (the  2010  Plan),  which  has  been  frozen;  the  Amended  and  Restated  2014  Stock 
Incentive  Plan  (the  2014  Plan);  and  the  2018  Plan.  Shares  of  common  stock  underlying  awards  that  are  forfeited 
under  the  2010  Plan  on  or  after  June  2,  2016  will  become  available  for  issuance  under  the  2014  Plan.  As  of 
December  31,  2021,  the  Company  also  had  awards  outstanding  under  the  Assembly  Biosciences,  Inc.  2017 

F-26

 
 
   
   
 
 
 
Inducement  Award  Plan  (the  2017  Plan),  the  2019  Inducement  Award  Plan  (the  2019  Plan)  and  the  Assembly 
Biosciences, Inc. 2020 Inducement Award Plan (the 2020 Plan).

The Company issues new shares of common stock to settle options exercised or vested RSUs. The Company also 
issues new shares of common stock in connection with purchases of shares of common stock by eligible employees 
under the Company’s 2018 ESPP.

Stock Plan Activity

Stock Options

The following table summarizes the stock option activity and related information for 2021:

Weighted
Average
Exercise
Price
Per Share

Number
of Shares

Outstanding as of December 31, 2020.......................    6,696,592    $
Granted.......................................................................    1,521,370     
Forfeited.....................................................................    (2,046,861)    
(9,200)    
Expired.......................................................................   
Outstanding as of December 31, 2021.......................    6,161,901    $
Options vested and exercisable as of December 31, 
2021............................................................................    3,805,841    $

15.70   
4.24   
18.93   
30.00   
11.77   

13.53   

Weighted
Average
Remaining
Contractual
Term
(Years)

Total
Intrinsic
Value (in
thousands)

6.9    $

1,856 

6.4    $

5.0    $

53 

51  

The  weighted-average  grant-date  fair  value  of  options  granted  was  $3.05  and  $10.64  during  the  years  ended 
December 31, 2021 and 2020, respectively. The total intrinsic value of options exercised in 2020 was $2.0 million. 
There were no options exercised in 2021.

RSUs

The following table summarizes RSU activity and related information for 2021:

Nonvested as of December 31, 2020 ...........................................................   
Granted.........................................................................................................   
Vested ..........................................................................................................   
Forfeited.......................................................................................................   
Nonvested as of December 31, 2021 ...........................................................   

Number
of RSUs

886,868    $
721,341   
(347,096)  
(290,774)  
970,339 

$

Weighted
Average Fair
Value Per RSU
at Grant Price

20.36 
3.78 
27.97 
14.64 
7.04  

The  total  fair  value  of  RSUs  vested  and  settled  during  2021  and  2020  was  $3.7  million  and  $7.8  million, 
respectively. The total intrinsic value of RSUs vested and settled during 2021 and 2020 was $1.4 million and $4.4 
million, respectively.

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In  September  2019,  the  Company  granted  100,000  RSUs  with  performance-based  vesting  conditions  to  its  chief 
executive  officer.  On  March  31,  2021,  25,000  of  these  awards  were  forfeited  back  to  the  Company  due  to  the 
expiration of the time period to complete one of the performance conditions. On July 31, 2021, an additional 25,000 
of these awards were forfeited back to the Company due to the expiration of the time period to complete one of the 
performance  conditions.  The  outstanding  50,000  awards  with  an  aggregate  fair  value  of  $0.4  million  vest  upon 
performance  conditions  not  yet  deemed  probable.  Accordingly,  no  stock-based  compensation  expense  has  been 
recognized as of December 31, 2021. 

In July 2020, the performance condition for 45,000 RSUs granted in December 2017 to a former executive officer 
was met associated with the execution of an HBV business development transaction. The Company recognized $0.7 
million as a cumulative catch-up adjustment of stock-based compensation expense for this award for the year ended 
December 31, 2020. 

In July 2021, the Company granted a total of 324,214 RSUs with performance-based vesting conditions upon the 
achievement  of  clinical  milestones  to  the  majority  of  employees,  including  executive  officers.  The  awards  had  a 
grant date fair value of $1.2 million and vest upon performance conditions not yet deemed probable. Accordingly, 
no stock-based compensation expense has been recognized as of December 31, 2021.

Employee Stock Purchase Plan

The 2018 ESPP provides for the purchase by employees of up to an aggregate of 1,300,000 shares of the Company’s 
common stock at a discount to the market price. Eligible employee may participate through payroll deductions of up 
to 15% of such employee’s compensation for each pay period subject to annual statutory limits and the 2018 ESPP’s 
limit, which the Company’s stockholders approved in May 2021 to increase from 1,000 to 2,500 shares of common 
stock per offering. 

Eligible  employees  can  purchase  the  Company’s  common  stock  at  the  end  of  a  predetermined  offering  period  at 
85% of the lower of the fair market value at the beginning or end of the offering period. Under the 2018 ESPP, the 
offering  periods  end  on  the  last  business  day  occurring  on  or  before  May  14  or  November  14.  The  ESPP  is 
compensatory and results in stock-based compensation expense.

In May and November 2020, employees purchased 42,266 and 44,546 shares of common stock, respectively, under 
the  2018  ESPP.  In  May  and  November  2021,  employees  purchased  42,803  and  46,017  shares  of  common  stock, 
respectively, under the 2018 ESPP. As of December 31, 2021, 1,043,515 shares of common stock are available for 
future sale under the Company’s 2018 ESPP. Stock-based compensation expense recorded in connection with the 
2018 ESPP was $0.1 million and $0.5 million for the years December 31, 2021 and 2020, respectively.

Valuation Assumptions

The Company used the Black-Scholes option-pricing model for determining the estimated fair value and stock-based 
compensation related to stock options and ESPP purchase rights. 

A summary of the assumptions used to estimate the fair values of stock options grants for the years presented is as 
follows: 

Exercise price ...............................................................................................  
Expected volatility........................................................................................  
Risk-free rate ................................................................................................  
Expected term (years)...................................................................................  
Expected dividend yield ...............................................................................  

Year Ended December 31,

2021
$2.24 - $5.79
79.7% - 91.2%    
0.50% - 1.37%    

5.5 - 7.5
0%

2020

$5.62 - $23.30  
66.4% - 92.3%  
0.26% - 1.44%  
5.5 - 7.5
0%

The risk-free interest rate assumption was based on the rates for U.S. Treasury zero-coupon bonds with maturities 
similar to those of the expected term of the stock option being valued. The expected dividend yield was zero as the 
Company currently does not intend to pay dividends in the foreseeable future. The weighted average expected term 
of  options  was  calculated  using  the  simplified  method  as  prescribed  by  accounting  guidance  for  stock-based 
compensation  due  to  the  Company’s  limited  history  of  relevant  stock  option  exercise  activity.  The  expected 

F-28

 
 
 
 
 
   
 
   
   
 
   
 
volatility was calculated based on the Company’s historical stock prices, supplemented as necessary with historical 
volatility of the common stock of several peer companies with characteristics similar to those of the Company.

The fair value of ESPP purchase rights were not material for any period presented.

Stock-Based Compensation Expense

The Company recognized stock-based compensation expense included in the consolidated statement of operations 
and comprehensive loss for the years presented (in thousands):

Research and development ..........................................................................  $
General and administrative ..........................................................................   
Total stock-based compensation expense ....................................................  $

Year Ended December 31,

2021

2020

548    $

4,689 
5,237    $

11,380 
10,473 
21,853  

Stock-based  compensation  expense  for  the  year  ended  December  31,  2021  includes  the  reversal  of  previously 
recognized stock-based compensation expense related to awards forfeited by terminated employees of $4.8 million 
and  $2.1  million  included  in  research  and  development  expenses  and  general  and  administrative  expenses, 
respectively.  As  of  December  31,  2021,  there  was  $9.7  million  of  total  unrecognized  stock-based  compensation 
related  to  outstanding  equity  awards  which  is  expected  to  be  recognized  over  a  weighted  average  remaining 
amortization period of 1.6 years.

Note 10 - Collaboration Agreements

Allergan Agreement

In  January 2017,  the  Company  and  Allergan  Pharmaceuticals  International  Limited  (Allergan)  entered  into  the 
Research,  Development,  Collaboration  and  License  Agreement  (the  Allergan  Agreement)  to  develop  and 
commercialize  select  microbiome  gastrointestinal  disease  therapies.  In  June  2020,  following  its  acquisition  of 
Allergan,  AbbVie  Inc.  (AbbVie),  on  behalf  of  Allergan,  gave  written  notice  of  termination  of  the  Allergan 
Agreement,  which  subsequently  became  effective  in  October  2020.  Upon  termination,  the  licenses  granted  by  the 
Company and its know-how reverted to the Company. 

For the year ended December 31, 2020, the Company recognized $48.1 million in collaboration revenue associated 
with the Allergan Agreement. A contract asset balance of $1.0 million was recorded as of December 31, 2020. There 
were no deferred revenue contract liabilities as of December 31, 2020 and no revenue, contract assets or contract 
liabilities  recognized  as  of  and  for  the  year  ended  December  31,  2021  due  to  the  termination  of  the  Allergan 
Agreement in 2020.

BeiGene Agreement

In  July  2020,  the  Company  and  BeiGene,  Ltd.  (BeiGene)  entered  into  a  Collaboration  Agreement  (the  BeiGene 
Agreement)  to  develop  and  commercialize  the  Company’s  novel  core  inhibitor  product  candidates  VBR,  ABI-
H2158 and ABI-H3733 for chronic HBV infection (the Licensed Product Candidates) in the People’s Republic of 
China,  Hong  Kong,  Taiwan  and  Macau  (the  Territory).  Under  the  agreement,  the  Company  and  BeiGene  are 
collaborating on certain global clinical studies and both the Company and BeiGene will independently conduct other 
clinical studies in their own respective territories. 

BeiGene agreed to pay all development and regulatory costs for the Licensed Product Candidates in the Territory up 
to  an  aggregate  of  $45.0  million.  Development  and  regulatory  costs  for  the  Licensed  Product  Candidates  for  the 
Territory in excess of $45.0 million will be shared equally by the Company and BeiGene. If the Company conducts 
certain ancillary trials outside of the plan to develop these candidates in the Territory, BeiGene may elect to obtain 
access  to  the  know-how  and  clinical  data  resulting  for  such  ancillary  trials  and  shall  reimburse  the  Company 
proportionally for the Territory of the costs of such trials. Activities under the BeiGene Agreement will be governed 
by  a  joint  steering  committee  (JSC)  consisting  of  equal  representatives  from  each  party  to  the  agreement.  All 
decisions of the JSC are to be made by consensus with final decision-making authority granted to each party based 
on key areas of the collaboration for which they are responsible. During the term of the BeiGene Agreement, neither 

F-29

 
 
 
 
 
   
 
   
party  will  commercialize  any  competing  products  in  the  Territory.  The  Company  will  be  responsible  for 
manufacturing  and  supply  of  the  candidates  to  be  used  in  and  outside  of  the  Territory,  although  the  parties  may 
approve BeiGene to take on some or all of the commercial supply activities of the applicable Licensed Products in 
the Territory.

The Company is not obligated to perform pre-phase 3 clinical trial development work outside the Territory on ABI-
H2158 and ABI-H3733 but must provide BeiGene pre-Phase 3 clinical trial know-how and development results if 
and when such development efforts are completed. If, after ABI-H2158 and ABI-H3733 reach the end of Phase 2 
clinical  trials,  the  Company  and  BeiGene  are  unable  to  mutually  agree  on  the  terms  of  a  Phase  3  global  study, 
BeiGene may elect to terminate the BeiGene Agreement solely as it relates to that compound, as applicable. Such a 
termination  would  result  in  the  Company  regaining  all  rights  to  the  applicable  compound  in  the  Territory.  In 
addition,  BeiGene  may  terminate  the  BeiGene  Agreement  for  convenience  at  any  time  upon  90  days’  advance 
written notice to Assembly. The BeiGene Agreement also contains customary provisions for termination by either 
party, including in the event of breach of the BeiGene Agreement, subject to cure.

Pursuant to the terms of the BeiGene Agreement, the Company received an upfront cash payment of $40.0 million 
from  BeiGene  for  the  delivery  of  exclusive,  royalty-bearing  licenses  to  develop  and  commercialize  the  Licensed 
Product Candidates in the Territory, and the Company was eligible to receive up to approximately $500.0 million in 
cash milestone payments, comprised of up to $113.8 million for development and regulatory milestones and up to 
$385.0 million in net sales milestones. In addition, the Company is eligible to receive tiered royalties at percentages 
ranging  from  the  mid-teens  to  the  low  thirties  of  net  sales.  In  September  2021,  the  Company  discontinued 
development of ABI-H2158 following the observation of elevated alanine transaminase levels in the Phase 2 clinical 
study  consistent  with  drug-induced  hepatotoxicity.  Due  to  the  discontinuation  of  development  of  ABI-H2158,  the 
maximum cash milestone payments the Company is eligible to receive for VBR and ABI-H3733 is $427.5 million, 
comprised of up to $97.5 million for development and regulatory milestones and up to $330.0 million in net sales 
milestones.

The BeiGene Agreement is within the scope of the collaborative arrangements guidance as both parties are active 
participants  and  are  exposed  to  significant  risks  and  rewards  dependent  on  the  success  of  commercializing  the 
Licensed Product Candidates in the Territory but that the unit of account related to the delivery of Licensed Product 
Candidates is within the scope of the contract with customers guidance.    The remaining units of account related to 
participation on the JSC and subcommittees, clinical supply and other in Territory and global development activities 
(the Collaboration Activities) are within the scope of the collaborative arrangements guidance. Commercial supply 
will  be  evaluated  as  a  separate  contract  when  the  agreement  is  executed  and  a  purchase  order  is  received  from 
BeiGene.

The  Company  identified  the  following  material  promises  related  to  the  contract  with  customers  unit  of  account 
under the BeiGene Agreement: 1) the transfer of the VBR License, 2) the transfer of the ABI-H2158 License, and 3) 
the transfer of the ABI-H3733 License. The Company concluded each of these licenses to be functional as they have 
significant  standalone  functionality  and  grants  BeiGene  the  right  to  use  the  Company’s  intellectual  property  as  it 
exists on the effective date of the license. The ABI-H2158 and ABI-H3733 Licenses have a continuing technology 
transfer obligation that is considered to be an attribute of these licenses. The agreed upon prices for the clinical and 
commercial supply of the Licensed Product Candidates to BeiGene do not represent material rights, and therefore 
are not performance obligations, and such pricing on an aggregate basis represents the SSP an entity would typically 
pay for such a product in that region or market. There are also no minimum purchase commitments.

The Company estimated the SSP of the Licenses using an income-based valuation approach for the estimated value 
a  licensor  of  the  compounds  would  receive  considering  the  stage  of  the  compound’s  development.  The  Company 
believes a change in the assumptions used to determine its best estimate of SSP would not have a significant value 
or significant impact on the allocation of consideration received.

The  transaction  price  at  the  inception  of  the  agreement  was  limited  to  the  $40.0  million  upfront  payment.  The 
variable  consideration  related  to  the  remaining  development  and  commercialization  milestone  payments  has  not 
been included in the transaction price as these were fully constrained as of December 31, 2021 and 2020. As part of 
the  Company’s  evaluation  of  the  development  and  commercialization  milestones  constraint,  the  Company 
determined the achievement of such milestones are contingent upon success in future clinical trials and regulatory 
approvals which are not within its control and uncertain at this stage. Any variable consideration related to sales-
based milestones (including royalties) will be recognized when the related sales occur as they were determined to 
relate  predominantly  to  the  Licensed  Product  Candidates  granted  to  BeiGene.  The  Company  will  reevaluate  the 
transaction price in each reporting period as uncertain events are resolved or other changes in circumstances occur.

F-30

During the year ended December 31, 2020, the Company recognized $31.0 million as collaboration revenue for the 
amount allocated to the VBR License as substantial completion of the license technology transfer had occurred. The 
remaining transaction price allocated to the ABI-H2158 and ABI-H3733 Licenses of $9.0 million was recorded as a 
long-term deferred revenue contract liability on the consolidated balance sheet as of December 31, 2020. Following 
the  discontinuation  of  development  of  ABI-H2158  in  September  2021,  the  obligation  related  to  the  technology 
transfer  associated  with  the  license  of  ABI-H2158  was  considered  to  be  complete.  Accordingly,  the  Company 
recognized  $6.3  million  as  collaboration  revenue  for  the  amount  allocated  to  ABI-H2158  during  the  year  ended 
December  31,  2021.  The  remaining  transaction  price  allocated  to  the  ABI-H3733  License  of  $2.7  million  was 
recorded  as  a  long-term  deferred  revenue  contract  liability  on  the  consolidated  balance  sheet  as  of  December  31, 
2021. Revenue for the remaining performance obligation will be recognized when the Company provides pre-Phase 
3  clinical  study  know-how  and  development  results  for  ABI-H3733  to  BeiGene  or  a  termination  of  the  BeiGene 
Agreement for ABI-H3733.

Payments to, or reimbursements from, BeiGene related to the Collaboration Activities will be accounted for as an 
increase to or reduction of research and development expenses when incurred or realized, respectively. During the 
years ended December 31, 2021 and 2020, the Company did not recognize any increase or reduction of research and 
development expense under the BeiGene Agreement. 

The Company incurred $3.5 million in incremental costs of obtaining the BeiGene Agreement. These contract costs 
have been capitalized and are being recognized consistent with the pattern of recognition of revenue associated with 
the Licensed Product Candidates. As of December 31, 2021 and 2020, the remaining unamortized contract costs are 
$0.2 million and $0.8 million, respectively, and are included in other assets on the consolidated balance sheet.

Arbutus Agreement

In  August  2020,  the  Company  and  Arbutus  Biopharma  Corporation  (Arbutus)  entered  into  a  Collaboration 
Agreement (Arbutus Agreement) to conduct a randomized, multi-center, open-label Phase 2 clinical trial to explore 
the safety, PK and antiviral activity of the triple combination of VBR, AB-729 and an NrtI compared to the double 
combinations of VBR with an NrtI and AB-729 with an NrtI. Assembly and Arbutus will share responsibility for the 
costs of the trial equally, excluding manufacturing supply which will be the burden of each company to supply their 
respective drugs VBR and AB-729.

The  Arbutus  Agreement  is  within  the  scope  of  the  collaborative  arrangements  guidance  as  both  parties  are  active 
participants and are exposed to significant risks and rewards dependent on the success of the collaborative activity. 
Arbutus is not a customer as it does not obtain an output from the collaborative activities as they were not provided 
an  exclusive  license  to  VBR  or  the  ability  to  manufacture  VBR,  and  the  Company  does  not  consider  performing 
such collaborative activities to be a part of its ongoing activities.

The revenue from contracts with customers guidance was considered by analogy in determining the unit of account, 
and  the  recognition  and  measurement  of  such  unit  of  account  for  collaborative  activities  under  the  Arbutus 
Agreement  and  concluded  there  is  one  activity,  to  run  an  open-label  Phase  2  clinical  trial,  which  is  akin  to 
performance  obligation  related  to  collaborative  activities.  Reimbursements  and  cost-sharing  portions  of  this 
performance obligation will be reflected as a reduction of research and development expense when realized in the 
Company’s  consolidated  statements  of  operations,  as  the  Company  does  not  consider  performing  research  and 
development  services  for  reimbursement  to  be  a  part  of  its  ongoing  major  or  central  operations.  The  Company 
recognized  a  reduction  of  research  and  development  expense  of  $2.0  million  and  $0.2  million  under  the  Arbutus 
Agreement during the years ended December 31, 2021 and 2020, respectively.

F-31

Antios Agreement

In  July  2021,  the  Company  and  Antios  Therapeutics,  Inc.  (Antios)  entered  into  a  Clinical  Trial  Collaboration 
Agreement (the Antios Agreement) to collaborate on a clinical trial of a combination therapy using either or both of 
the Company’s core inhibitors, VBR and ABI-H2158, and Antios’s active site polymerase inhibitor nucleotide ATI-
2173 for the treatment of HBV. Assembly and Antios will individually be responsible for the study’s manufacturing 
costs but will equally share the remaining costs of the study. The Antios Agreement does not bind either party to 
conducting a collaboration trial or collaboration trial cohort unless and until a Joint Development Committee (the 
JDC)  formed  by  both  parties  decides  to  initiate  a  collaboration  trial  or  collaboration  trial  cohort.  Due  to  the 
discontinuation of development of ABI-H2158 in September 2021, any study under the Antios Agreement would be 
with VBR.

The  Antios  Agreement  is  within  the  scope  of  the  collaborative  arrangements  guidance  as  both  parties  are  active 
participants and are exposed to significant risks and rewards dependent on the success of the collaborative activity. 
Antios is not a customer as it does not obtain an output from the collaborative activities as they were not provided an 
exclusive license to ABI-H2158 or VBR or the ability to manufacture ABI-H2158 or VBR, and the Company does 
not consider performing such collaborative activities to be a part of its ongoing activities. 

In October 2021, the JDC agreed to initiate a collaboration trial cohort to evaluate a triple combination treatment in 
patients with chronic HBV infection. There were no costs incurred during the year ended December 31, 2021.

Note 11 – Milestones and Research Agreements

HBV Research Agreement with Indiana University

Since September 2013, the Company has been party to an exclusive License Agreement dated September 3, 2013 
with Indiana University Research and Technology Corporation (IURTC) from whom it has licensed aspects of the 
Company’s  HBV  program  held  by  IURTC.  The  license  agreement  requires  the  Company  to  make  milestone 
payments based upon the successful accomplishment of clinical and regulatory milestones. The aggregate amount of 
all  performance  milestone  payments  under  the  IURTC  license  agreement,  should  all  milestones  through 
development be met, is $0.8 million, with a portion related to the first performance milestone having been paid. The 
Company is obligated to pay IURTC royalty payments based on net sales of the licensed technology as well as a 
portion of any sublicensing revenue Assembly receives. The Company is also required to pay diligence maintenance 
fees  each  year  to  the  extent  that  the  royalty,  sublicensing,  and  milestone  payments  to  IURTC  are  less  than  the 
diligence  maintenance  fee  for  that  year.  A  performance  milestone  totaling  $0.1  million  was  determined  to  have 
occurred under this agreement and was paid during the year ended December 31, 2020. Additionally, the Company 
paid IURTC $0.7 million as a sublicensing fee during the year ended December 31, 2020. No milestone payments 
were incurred or accrued under the License Agreement during the year ended December 31, 2021. The milestone 
and license fees are included in research and development expenses in the consolidated statements of operations and 
comprehensive loss.

Microbiome Targeted Colonic Delivery Platform

In  November  2013,  the  Company  entered  into  a  License  and  Collaboration  Agreement  with  Therabiome,  LLC 
(Therabiome),  for  all  intellectual  property  and  know-how  owned  or  controlled  by  Therabiome  relating  to  the  oral 
delivery of pharmaceutical drugs to specific sites in the intestine, using a pH sensitive controlled release capsule-in-
capsule technology. The Company will be solely responsible for all research and development activities with respect 
to any product it develops under the license.

The  Company  was  obligated  to  pay  Therabiome  clinical  and  regulatory  milestones  for  each  product  or  therapy 
advanced  from  the  platform  for  U.S.  regulatory  milestones.  In  addition,  the  Company  was  obligated  to  pay 
Therabiome  lesser  amounts  for  foreign  regulatory  milestones,  which  varied  by  country  and  region.  The  Company 
was  also  required  to  pay  Therabiome  royalties  on  annual  net  sales  of  a  product  in  the  low  to  mid-single 
digit percentages plus, once annual net  sales exceeded certain thresholds, a one-time cash payment upon reaching 
such thresholds.

F-32

Therabiome  was  obligated  to  pay  the  Company  royalties  on  annual  net  sales  of  any  product  Therabiome  was 
permitted to develop using the intellectual property in the low double to mid-double-digit percentages, depending on 
the level of development or involvement the Company had in the product. 

No amounts were incurred or accrued for this agreement as of and for the years ended December 31, 2021 and 2020. 
In  connection  with  the  wind-down  of  the  Microbiome  program,  the  License  and  Collaboration  Agreement  with 
Therabiome was terminated in January 2021, and the termination became effective in April 2021.

Door Agreement

In November 2020, the Company and Door Pharmaceuticals, LLC (Door Pharma) entered into an exclusive, two-
year  Collaboration  Agreement  and  Sublicense  Agreement  (collectively,  the  Door  Pharma  Agreement)  focused  on 
the development of a novel class of HBV inhibitors. Under the terms of the agreement, Door Pharma will build upon 
its previous efforts to lead and conduct new discovery research, which the Company will fund. In return for an up-
front payment of $1.8 million, success-based milestones up to $35.0 million, exercise and annual fees ranging from 
$0.1 million to $2.0 million and royalties in the low to mid-single digits, the Company will be granted an exclusive 
option to license compounds arising from the collaboration and will be responsible for the continued development 
and commercialization of optioned compounds.

During the years ended December 31, 2021 and 2020, the Company incurred research and development funding of 
$1.8  million  and  $0.3  million,  respectively.  Additionally,  a  performance  milestone  totaling  $0.2  million  was 
determined to have occurred under this agreement and was paid during the year ended December 31, 2021.

Under the consolidation accounting standard, the Company determined that Door Pharma is a VIE. The Company 
does  not  have  the  power  to  direct  the  activities  that  most  significantly  affect  the  economic  performance  of  Door 
Pharma and as such the Company is not the primary beneficiary and consolidation is not required. As of December 
31,  2021,  the  Company  has  not  provided  financial  or  other  support  to  Door  Pharma  that  was  not  contractually 
required.

Note 12 - Income Taxes

Income tax benefit is as follows (in thousands): 

Federal:
   Current ........................................................................   
   Deferred ......................................................................   
  $

State:
   Current ........................................................................   
   Deferred ......................................................................   
  $
Income tax benefit..........................................................  $

As of December 31,

2021

2020

—     
1,160     
1,160    $

—     
1,371     
1,371    $
2,531    $

— 
— 
— 

— 
— 
— 
—  

F-33

 
 
 
 
 
   
 
   
      
  
 
   
      
  
 
The effective tax rate of our provision for income taxes differs from the federal statutory rate as follows:

As of December 31,

2021

2020

Statutory federal income tax rate...................................   
State taxes, net of federal tax benefit.............................   
Research and development tax credits ..........................   
Return to provision adjustments....................................   
Other ..............................................................................   
Uncertain tax positions ..................................................   
Impairment of goodwill.................................................   
Stock-based compensation ............................................   
Change in valuation allowance......................................   
Income taxes benefit......................................................   

21.0%   

5.8 
2.3 
(0.2)    
(0.6)    
(0.5)    
(2.0)    
(4.5)    
(19.4)    
1.9%   

Significant components of the Company’s deferred taxes are as follows (in thousands):

As of December 31,

2021

2020

Deferred tax assets:

Federal and state-operating loss carryforwards........  $
Stock-based compensation .......................................   
Operating lease liabilities .........................................   
Research and development credits ...........................   
Other .........................................................................   
Total deferred tax assets.................................................   
Valuation allowance.......................................................   
Deferred tax asset, net of valuation allowance ..............  $

Deferred tax liabilities:

In-process research and development.......................  $
Operating lease right-of-use assets...........................   
Total deferred tax liabilities ...........................................   
Net deferred tax liability ................................................  $

133,671    $
11,082     
1,656     
11,106     
1,125     
158,640     
(157,095)    
1,545    $

—    $
(1,545)    
(1,545)    
—    $

21.0%
6.1 
2.2 
4.3 
0.1 
2.2 
— 
0.7 
(36.6)
0.0%

108,236 
16,563 
2,600 
8,872 
2,317 
138,588 
(131,332)
7,256 

(7,443)
(2,344)
(9,787)
(2,531)

The Company maintains a valuation allowance on deferred tax assets due to the uncertainty regarding the ability to 
utilize these deferred tax assets in the future. The valuation allowance increased by $25.8 million and $22.8 million 
for  the  years  ended  December  31,  2021  and  2020,  respectively,  primarily  due  to  an  increase  in  the  Company’s 
federal and state-operating loss carryforwards. The in-process research and development deferred tax liability was 
recorded in connection with the merger with Assembly Pharmaceuticals, Inc. in 2014 and relates to the difference 
between the carrying amount of in-process research and development for financial statement purposes relative to the 
amount used for income tax purposes. The impairment of the Company’s in-process research and development asset 
resulted  in  the  deferred  tax  liability  related  to  this  indefinite-lived  intangible  asset  no  longer  being  considered  a 
source  of  income  when  assessing  the  realizability  of  the  Company’s  deferred  tax  assets.  This  resulted  in  the 
recognition  of  a  $2.5  million  income  tax  benefit  with  a  corresponding  reduction  to  the  Company’s  valuation 
allowance during the year ended December 31, 2021. 

F-34

 
 
 
 
 
 
 
 
 
   
   
 
 
 
 
 
   
 
   
      
  
 
   
      
  
   
      
  
Net operating loss and tax credit carryforwards as of December 31, 2021 are as follows (in thousands):

Net operating losses, federal (post December 31, 2017) ..........   $
Net operating losses, federal (pre January 1, 2018) ..................    
Net operating loss, state (Indefinite) .........................................    
Net operating loss, state (Definite) ...........................................    
Research and development tax credits, federal .........................    
Research and development tax credits, state.............................    

Amount

346,847   
123,552   
880   
545,256   
10,845   
4,174   

Expiration Years
Indefinite
2027 - 2037
Indefinite
2031 - 2041
2028 - 2041
Indefinite

Pursuant  to  Internal  Revenue  Code  (IRC),  Section 382  and  383,  use  of  the  Company’s  U.S.  federal  and  state  net 
operating  loss  and  research  and  development  income  tax  credit  carryforwards  may  be  limited  in  the  event  of  a 
cumulative  change  in  ownership  of  more  than  50.0%  within  a  three-year  period.  The  Company  has  performed  an 
ownership change study through December 31, 2020 and has determined that a “change in ownership” as defined by 
IRC Section 382 and the rules and regulations promulgated thereunder, did occur in December 2010, January 2013 
and October 2014. The Company has adjusted its net operating loss carryovers to appropriately reflect any attributes 
which  will  expire  due  to  the  limitation.  The  Company  has  not  performed  any  additional  analysis  for  IRC 
Sections 382 and 383 and there is a risk that additional changes in ownership could have occurred since December 
31, 2020. If a change in ownership were to have occurred, additional net operating loss and tax credit carryforwards 
could  be  eliminated  or  restricted.  If  eliminated,  the  related  asset  would  be  removed  from  the  deferred  tax  asset 
schedule with a corresponding reduction in the valuation allowance.

The following table summarizes activity related to the Company’s gross unrecognized tax benefits (in thousands):

Balances as of beginning of year ...................................  $
Increases related to prior year tax positions...................   
Decreases related to prior year tax positions .................   
Increases related to current year tax positions ...............   
Balances as of end of year .............................................  $

As of December 31,

2021

2020

2,655    $
1     
(82)    
663     
3,237    $

6,070 
— 
(4,162)
747 
2,655  

The  unrecognized  tax  benefits,  if  recognized,  would  not  have  an  impact  on  the  Company’s  effective  tax  rate 
assuming the Company continues to maintain a full valuation allowance position. Based on prior year’s operations 
and  experience,  the  Company  does  not  expect  a  significant  change  to  its  unrecognized  tax  benefits  over  the  next 
twelve  months.  The  unrecognized  tax  benefits  may  increase  or  change  during  the  next  year  for  unexpected  or 
unusual  items  for  items  that  arise  in  the  ordinary  course  of  business.  In  subsequent  periods,  any  interest  and 
penalties related to uncertain tax positions will be recognized as a component of income tax expense.

F-35

 
 
   
 
 
 
 
 
   
 
The Company files income tax returns in the U.S. federal, California and other state and foreign jurisdictions and is 
not  currently  under  examination  by  federal,  state,  or  local  taxing  authorities  for  any  open  tax  years.  Due  to  net 
operating loss carryforwards, all years effectively remain open for income tax examination by tax authorities in the 
U.S. and states in which the Company files tax returns.

Note 13 - Leases

Operating Leases

The  Company  leases  office  and  laboratory  space  in  South  San  Francisco,  California  under  a  sub-sublease  that 
expires in December 2023. The sub-sublease contains scheduled rent increases over the lease term. The Company 
also leases office space in Carmel, Indiana under a lease agreement that expires in August 2023. In February 2021, 
the Company subleased substantially all of the office space under lease in Carmel, Indiana for the remainder of its 
term. The Company also leased office and laboratory space in Groton, Connecticut that supported the Microbiome 
program under a lease that expired in June 2021. Due to the wind-down of the Microbiome program, the lease was 
not renewed. The Company’s China subsidiary leased office space and lab space in Shanghai, which the Company 
let  expire  in  March  2021  and  December  2020,  respectively.  The  Company’s  also  leased  office  space  in  Beijing 
under a lease agreement which the Company let expire in December 2021. The Company’s China subsidiary leases 
registrational  offices  in  Shanghai  and  Beijing  under  leases  which  expire  in  May  2022  and  October  2022, 
respectively. Certain lease contracts contain renewal clauses that the Company assesses on a case-by-case basis. The 
Company also leases certain laboratory equipment accounted for as operating leases expiring at various dates, with 
the final lease expiring in 2024. In February 2021, the Company purchased substantially all of the leased equipment 
used for the Microbiome program from its leasing agency and sold this equipment to third parties (see Note 7). 

When the Company cannot determine the implicit rate in its leasing arrangements, the Company uses its incremental 
borrowing  rate  as  the  discount  rate  when  measuring  operating  lease  liabilities.  The  incremental  borrowing  rate 
represents an estimate of the interest rate the Company would incur at lease commencement to borrow an amount 
equal  to  the  lease  payments  on  a  collateralized  basis  over  the  term  of  a  lease  within  a  particular  currency 
environment.

At December 31, 2021, the Company had operating lease liabilities of $6.5 million and right-of-use assets of $6.0 
million.

The following summarizes quantitative information about the Company’s operating leases (in thousands):

Lease cost

Operating lease cost .................................................................  $
Short-term lease cost................................................................ 
Variable lease cost ................................................................... 
Sublease income....................................................................... 
Total lease cost, net .......................................................................  $

3,840    $
268   
1,317   
(142)  
5,283    $

Year Ended December 31,

2021

2020

Operating cash flows from operating leases..................................  $
ROU assets exchanged for new operating lease liabilities ............  $

3,786    $
126    $

Year Ended December 31,

2021

2020

5,214 
401 
1,468 
— 
7,083  

4,513 
1,302  

As  of  December  31,  2021,  the  weighted-average  remaining  lease  term  for  operating  leases  was  1.9  years  and  the 
weighted-average discount rate for operating leases was 9.7%.

F-36

 
 
 
 
 
   
 
 
   
   
   
 
 
 
 
 
 
 
 
 
 
 
 
   
 
As of December 31, 2021, the maturities of the Company’s operating lease liabilities were as follows (in thousands):

2022............................................................................................................................. 
2023............................................................................................................................. 
2024............................................................................................................................. 
Total ............................................................................................................................ 
Less: present value discount ....................................................................................... 
Operating lease liabilities............................................................................................  $

3,643 
3,491 
10 
7,144 
(668)
6,476  

Note 14 - Employee Benefit Plan

In January 2018, the Company established a defined contribution 401(k) plan (the Plan) for all employees who are at 
least 21 years of age. Employees are eligible to participate in the Plan upon commencement of employment. Under 
the terms of the Plan, employees may make voluntary contributions as a percentage of compensation. The Plan also 
permits  the  Company  to  make  discretionary  matching  contributions.  In  both  2021  and  2020,  the  Company  made 
discretionary matching contributions of $0.9 million.

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CORPORATE INFORMATIONDirectors William R. Ringo, Jr.Former Chairman of the Board, Five Prime Therapeutics, Inc.Anthony E.AltigFormer Chief Financial Officer, Biotix Holdings, Inc.Gina ConsylmanChief Financial Officer,Vedere Bio II, Inc.Richard D. DiMarchi, Ph.D.Distinguished Professor of Biochemistry and Gill Chair in Biomolecular Sciencesat Indiana UniversityMyron Z. HolubiakPresident and Chief Executive Officer, Citius Pharmaceuticals, Inc.Sir Michael Houghton, Ph.D.La Ka Shing Professor, Department of Medical Microbiology at the University of AlbertaLisa R. Johnson-Pratt, M.D.Senior Vice President, Commercial, Ionis Pharmaceuticals, Inc.Susan Mahony, Ph.D.Former Senior Vice President andPresident of Lilly Oncology, Eli Lilly and CompanyJohn G. McHutchison, A.O., M.D.Chief Executive Officer and President, Assembly Biosciences, Inc.Corporate Headquarters331 Oyster Point Blvd., Fourth FloorSouth San Francisco, California 94080+1.833.509.4583Websitewww.assemblybio.comStock ListingAssembly Biosciences, Inc. common stock is listed on The Nasdaq Global Select Market and quoted under the symbol “ASMB”Executive OfficersJohn G. McHutchison, A.O., M.D.Chief Executive Officer and PresidentMichael P. SamarChief Financial OfficerJason A. OkazakiChief OperatingOfficerLuisa M.Stamm, M.D., Ph.D.Chief Medical OfficerWilliam E. Delaney IV, Ph.D.Chief Scientific OfficerTransfer AgentAmerican Stock Transfer & Trust Company6201 15thAvenueBrooklyn, New York 11219331 Oyster Point Boulevard4th FloorSouth San Francisco, CA 94080assemblybio.com2021 Annual Report